RNA–Protein interactions for RNA: ENST00000474323.5

SAMM50-203, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 2

Gene SAMM50, Length 2,368 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-203ENST00000474323 JMJD1CQ15652 2540 aa10.06□□□□□ -0.8
SAMM50-203ENST00000474323 NDUFC1O43677 76 aa10.06□□□□□ -0.8
SAMM50-203ENST00000474323 LINC01547P58512 204 aaPredicted RBP10.06□□□□□ -0.8
SAMM50-203ENST00000474323 FP248Q71RG6 208 aaPredicted RBP10.06□□□□□ -0.8
SAMM50-203ENST00000474323 F8P00451 2351 aa10.05□□□□□ -0.8
SAMM50-203ENST00000474323 DEFB114Q30KQ6 69 aa10.05□□□□□ -0.8
SAMM50-203ENST00000474323 TRBV6-8A0A0A6YYG3 113 aa10.04□□□□□ -0.8
SAMM50-203ENST00000474323 Q8IZM0 81 aa10.04□□□□□ -0.8
SAMM50-203ENST00000474323 TRAV10A0A0B4J240 114 aa10.03□□□□□ -0.8
SAMM50-203ENST00000474323 LINC00959A0A1B0GUT2 108 aa10.03□□□□□ -0.8
SAMM50-203ENST00000474323 F8WEM9 126 aa10.03□□□□□ -0.8
SAMM50-203ENST00000474323 RMI2Q96E14 147 aa10.03□□□□□ -0.8
SAMM50-203ENST00000474323 NOP10Q9NPE3 64 aaKnown RBP10.03□□□□□ -0.8
SAMM50-203ENST00000474323 SNURFQ9Y675 71 aa10.03□□□□□ -0.8
SAMM50-203ENST00000474323 LOC100131303A0A0U1RQF7 123 aa10.03□□□□□ -0.8
SAMM50-203ENST00000474323 ATP5EP56381 51 aaPredicted RBP10.03□□□□□ -0.8
SAMM50-203ENST00000474323 CXCL6P80162 114 aa10.03□□□□□ -0.8
SAMM50-203ENST00000474323 C11orf68Q9H3H3 251 aaKnown RBP10.03□□□□□ -0.8
SAMM50-203ENST00000474323 CCL24O00175 119 aa10.02□□□□□ -0.8
SAMM50-203ENST00000474323 PRR3P79522 188 aaKnown RBP10.02□□□□□ -0.8
SAMM50-203ENST00000474323 HAMPP81172 84 aa10.02□□□□□ -0.8
SAMM50-203ENST00000474323 Q6ZVQ6 151 aa10.02□□□□□ -0.8
SAMM50-203ENST00000474323 LINC00575Q6W349 94 aa10.02□□□□□ -0.81
SAMM50-203ENST00000474323 C6orf223Q8N319 242 aa10.02□□□□□ -0.81
SAMM50-203ENST00000474323 TENM1Q9UKZ4 2725 aa10.01□□□□□ -0.81
SAMM50-203ENST00000474323 PDE6GP18545 87 aa10.01□□□□□ -0.81
SAMM50-203ENST00000474323 ODF3L2Q3SX64 289 aa10.01□□□□□ -0.81
SAMM50-203ENST00000474323 BAHCC1Q9P281 2608 aa10.01□□□□□ -0.81
SAMM50-203ENST00000474323 TRGV2A0A075B6R0 118 aa10.01□□□□□ -0.81
SAMM50-203ENST00000474323 COX17Q14061 63 aa10□□□□□ -0.81
SAMM50-203ENST00000474323 C6orf99Q4VX62 202 aa10□□□□□ -0.81
SAMM50-203ENST00000474323 TRBV7-6A0A0J9YX20 115 aa10□□□□□ -0.81
SAMM50-203ENST00000474323 CD164Q04900 197 aa10□□□□□ -0.81
SAMM50-203ENST00000474323 ATRQ13535 2644 aa9.99□□□□□ -0.81
SAMM50-203ENST00000474323 TEP1Q99973 2627 aaKnown RBP9.99□□□□□ -0.81
SAMM50-203ENST00000474323 LAMTOR3Q9UHA4 124 aa9.99□□□□□ -0.81
SAMM50-203ENST00000474323 TRGV4A0A0C4DH28 118 aa9.99□□□□□ -0.81
SAMM50-203ENST00000474323 C9orf66Q5T8R8 295 aa9.97□□□□□ -0.81
SAMM50-203ENST00000474323 CD164L2Q6UWJ8 174 aa9.97□□□□□ -0.81
SAMM50-203ENST00000474323 C16orf74Q96GX8 76 aa9.97□□□□□ -0.81
SAMM50-203ENST00000474323 H3BQ85 93 aa9.97□□□□□ -0.81
SAMM50-203ENST00000474323 Q8N3U1 123 aa9.97□□□□□ -0.81
SAMM50-203ENST00000474323 TRBV7-4A0A0J9YYF1 115 aa9.96□□□□□ -0.81
SAMM50-203ENST00000474323 M0R2N4 97 aa9.96□□□□□ -0.81
SAMM50-203ENST00000474323 KRTAP10-3P60369 221 aa9.96□□□□□ -0.81
SAMM50-203ENST00000474323 VWFP04275 2813 aa9.96□□□□□ -0.81
SAMM50-203ENST00000474323 PLAC8L1A1L4L8 177 aa9.96□□□□□ -0.82
SAMM50-203ENST00000474323 MIFP14174 115 aa9.95□□□□□ -0.82
SAMM50-203ENST00000474323 C11orf45Q8TAV5 145 aa9.95□□□□□ -0.82
SAMM50-203ENST00000474323 NOTCH3Q9UM47 2321 aa9.95□□□□□ -0.82
SAMM50-203ENST00000474323 LINC00474Q9P2X8 69 aa9.95□□□□□ -0.82
SAMM50-203ENST00000474323 TM2D3Q9BRN9 247 aa9.94□□□□□ -0.82
SAMM50-203ENST00000474323 A0A1B0GUV1 79 aa9.93□□□□□ -0.82
SAMM50-203ENST00000474323 IGHV4-28A0A0C4DH34 117 aa9.93□□□□□ -0.82
SAMM50-203ENST00000474323 ERC2-IT1O76042 136 aa9.93□□□□□ -0.82
SAMM50-203ENST00000474323 KIAA0087Q14695 138 aa9.92□□□□□ -0.82
SAMM50-203ENST00000474323 MUC7Q8TAX7 377 aa9.91□□□□□ -0.82
SAMM50-203ENST00000474323 GIG44P09565 113 aaPredicted RBP9.9□□□□□ -0.82
SAMM50-203ENST00000474323 BRK1Q8WUW1 75 aa9.9□□□□□ -0.82
SAMM50-203ENST00000474323 NREPQ16612 68 aa9.9□□□□□ -0.82
SAMM50-203ENST00000474323 TMEM254Q8TBM7 123 aa9.9□□□□□ -0.82
SAMM50-203ENST00000474323 SPATA3Q8NHX4 192 aa9.89□□□□□ -0.83
SAMM50-203ENST00000474323 Q6ZQY7 126 aa9.89□□□□□ -0.83
SAMM50-203ENST00000474323 Q8NDZ9 215 aa9.89□□□□□ -0.83
SAMM50-203ENST00000474323 BPY2O14599 106 aa9.87□□□□□ -0.83
SAMM50-203ENST00000474323 IGLV6-57P01721 117 aa9.86□□□□□ -0.83
SAMM50-203ENST00000474323 C9orf116Q5BN46 136 aaPredicted RBP9.86□□□□□ -0.83
SAMM50-203ENST00000474323 PRR26Q8N8Z3 221 aa9.86□□□□□ -0.83
SAMM50-203ENST00000474323 IGLV1-51P01701 117 aa9.86□□□□□ -0.83
SAMM50-203ENST00000474323 CMC4P56277 68 aaPredicted RBP9.86□□□□□ -0.83
SAMM50-203ENST00000474323 CLPSL2Q6UWE3 100 aa9.85□□□□□ -0.83
SAMM50-203ENST00000474323 SCXQ7RTU7 201 aa9.85□□□□□ -0.83
SAMM50-203ENST00000474323 LINC00269Q8N2A0 174 aa9.85□□□□□ -0.83
SAMM50-203ENST00000474323 TRRAPQ9Y4A5 3859 aa9.84□□□□□ -0.83
SAMM50-203ENST00000474323 CYSRT1A8MQ03 144 aa9.83□□□□□ -0.84
SAMM50-203ENST00000474323 WFDC10AQ9H1F0 79 aa9.83□□□□□ -0.84
SAMM50-203ENST00000474323 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.83□□□□□ -0.84
SAMM50-203ENST00000474323 CSNK1G2-AS1Q8NCQ2 148 aa9.83□□□□□ -0.84
SAMM50-203ENST00000474323 FAM229BQ4G0N7 80 aa9.82□□□□□ -0.84
SAMM50-203ENST00000474323 GYPEP15421 78 aa9.82□□□□□ -0.84
SAMM50-203ENST00000474323 PMAIP1Q13794 54 aa9.82□□□□□ -0.84
SAMM50-203ENST00000474323 CHCHD10Q8WYQ3 142 aaPredicted RBP9.82□□□□□ -0.84
SAMM50-203ENST00000474323 MAST4O15021 2626 aa9.82□□□□□ -0.84
SAMM50-203ENST00000474323 A0A0U1RQV1 116 aa9.81□□□□□ -0.84
SAMM50-203ENST00000474323 PRYO14603 147 aa9.81□□□□□ -0.84
SAMM50-203ENST00000474323 ESRGQ1W209 222 aa9.81□□□□□ -0.84
SAMM50-203ENST00000474323 MPLKIPQ8TAP9 179 aa9.81□□□□□ -0.84
SAMM50-203ENST00000474323 STAB1Q9NY15 2570 aa9.81□□□□□ -0.84
SAMM50-203ENST00000474323 DIRC1Q969H9 104 aa9.8□□□□□ -0.84
SAMM50-203ENST00000474323 OCR1Q9BZK8 76 aa9.8□□□□□ -0.84
SAMM50-203ENST00000474323 FUSP35637 526 aaKnown RBP eCLIP9.79□□□□□ -0.84
SAMM50-203ENST00000474323 COX7BP24311 80 aa9.79□□□□□ -0.84
SAMM50-203ENST00000474323 Q6ZTC4 211 aa9.78□□□□□ -0.84
SAMM50-203ENST00000474323 C19orf73Q9NVV2 129 aa9.78□□□□□ -0.84
SAMM50-203ENST00000474323 A0A0J9YWU9 116 aa9.78□□□□□ -0.84
SAMM50-203ENST00000474323 IGHV4-30-4P0DP06 118 aa9.78□□□□□ -0.84
SAMM50-203ENST00000474323 DEFB130BP0DP73 79 aa9.77□□□□□ -0.85
SAMM50-203ENST00000474323 DEFB130AP0DP74 79 aa9.77□□□□□ -0.85
SAMM50-203ENST00000474323 FBN1P35555 2871 aaKnown RBP9.77□□□□□ -0.85
SAMM50-203ENST00000474323 IGKV4-1P06312 121 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 169.2 ms