RNA–Protein interactions for RNA: ENST00000474258.1

SEMA4D-216, Transcript of semaphorin 4D, humanhuman

TSL 4

Gene SEMA4D, Length 528 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-216ENST00000474258 TP73-AS1Q9UF72 201 aa6.9□□□□□ -1.3
SEMA4D-216ENST00000474258 NDUFA12Q9UI09 145 aa6.9□□□□□ -1.3
SEMA4D-216ENST00000474258 LOC107984640A0A0U1RRK4 108 aa6.89□□□□□ -1.31
SEMA4D-216ENST00000474258 APOMO95445 188 aa6.89□□□□□ -1.31
SEMA4D-216ENST00000474258 PTTG1IPP53801 180 aa6.89□□□□□ -1.31
SEMA4D-216ENST00000474258 GAGE2BQ13066 116 aa6.89□□□□□ -1.31
SEMA4D-216ENST00000474258 SPINK6Q6UWN8 80 aa6.89□□□□□ -1.31
SEMA4D-216ENST00000474258 Q6ZRP5 223 aa6.89□□□□□ -1.31
SEMA4D-216ENST00000474258 Q8IZM0 81 aa6.89□□□□□ -1.31
SEMA4D-216ENST00000474258 UBR4Q5T4S7 5183 aa6.88□□□□□ -1.31
SEMA4D-216ENST00000474258 A0A0J9YXY3 114 aa6.88□□□□□ -1.31
SEMA4D-216ENST00000474258 LINC00587B1AMM8 73 aa6.88□□□□□ -1.31
SEMA4D-216ENST00000474258 CTAG1AP78358 180 aa6.88□□□□□ -1.31
SEMA4D-216ENST00000474258 SFTA2Q6UW10 78 aa6.88□□□□□ -1.31
SEMA4D-216ENST00000474258 REG3GQ6UW15 175 aa6.88□□□□□ -1.31
SEMA4D-216ENST00000474258 CAMK2N2Q96S95 79 aa6.88□□□□□ -1.31
SEMA4D-216ENST00000474258 TNXBP22105 4242 aa6.87□□□□□ -1.31
SEMA4D-216ENST00000474258 HERV-K104P63124 156 aa6.87□□□□□ -1.31
SEMA4D-216ENST00000474258 SRSF9Q13242 221 aaKnown RBP eCLIP6.87□□□□□ -1.31
SEMA4D-216ENST00000474258 TAL2Q16559 108 aa6.87□□□□□ -1.31
SEMA4D-216ENST00000474258 C6orf226Q5I0X4 101 aa6.87□□□□□ -1.31
SEMA4D-216ENST00000474258 ORAOV1Q8WV07 137 aa6.87□□□□□ -1.31
SEMA4D-216ENST00000474258 C2orf48Q96LS8 159 aa6.87□□□□□ -1.31
SEMA4D-216ENST00000474258 TIMM17BO60830 172 aa6.86□□□□□ -1.31
SEMA4D-216ENST00000474258 PRSS2P07478 247 aa6.86□□□□□ -1.31
SEMA4D-216ENST00000474258 SCGB1D4Q6XE38 83 aa6.86□□□□□ -1.31
SEMA4D-216ENST00000474258 SPANXB1Q9NS25 103 aaPredicted RBP6.86□□□□□ -1.31
SEMA4D-216ENST00000474258 TOMM7Q9P0U1 55 aa6.86□□□□□ -1.31
SEMA4D-216ENST00000474258 F8WDY8 70 aa6.85□□□□□ -1.31
SEMA4D-216ENST00000474258 CXCL5P42830 114 aa6.85□□□□□ -1.31
SEMA4D-216ENST00000474258 HSD52Q0P140 79 aa6.85□□□□□ -1.31
SEMA4D-216ENST00000474258 RNF151Q2KHN1 245 aa6.85□□□□□ -1.31
SEMA4D-216ENST00000474258 LITAFQ99732 161 aa6.85□□□□□ -1.31
SEMA4D-216ENST00000474258 A0A1W2PNN7 141 aa6.84□□□□□ -1.31
SEMA4D-216ENST00000474258 KRTAP10-8P60410 259 aa6.84□□□□□ -1.31
SEMA4D-216ENST00000474258 RPL18AQ02543 176 aaKnown RBP6.84□□□□□ -1.31
SEMA4D-216ENST00000474258 SPAG11BQ08648 103 aa6.84□□□□□ -1.31
SEMA4D-216ENST00000474258 Q6ZVH6 145 aa6.84□□□□□ -1.31
SEMA4D-216ENST00000474258 CKS1BP61024 79 aa6.83□□□□□ -1.32
SEMA4D-216ENST00000474258 C9orf116Q5BN46 136 aaPredicted RBP6.83□□□□□ -1.32
SEMA4D-216ENST00000474258 TMEM238C9JI98 176 aa6.82□□□□□ -1.32
SEMA4D-216ENST00000474258 M0R143 59 aa6.82□□□□□ -1.32
SEMA4D-216ENST00000474258 BVES-AS1Q5T3Y7 98 aa6.82□□□□□ -1.32
SEMA4D-216ENST00000474258 ADAMTSL4-AS1Q5T5F5 129 aa6.82□□□□□ -1.32
SEMA4D-216ENST00000474258 C2orf82Q6UX34 121 aa6.82□□□□□ -1.32
SEMA4D-216ENST00000474258 SPANXDQ9BXN6 97 aa6.82□□□□□ -1.32
SEMA4D-216ENST00000474258 SNHG12Q9BXW3 62 aa6.82□□□□□ -1.32
SEMA4D-216ENST00000474258 PPDPFQ9H3Y8 114 aa6.82□□□□□ -1.32
SEMA4D-216ENST00000474258 SPANXCQ9NY87 97 aa6.82□□□□□ -1.32
SEMA4D-216ENST00000474258 CEND1Q8N111 149 aa6.81□□□□□ -1.32
SEMA4D-216ENST00000474258 HIST1H4GQ99525 98 aa6.81□□□□□ -1.32
SEMA4D-216ENST00000474258 PSORS1C2Q9UIG4 136 aa6.81□□□□□ -1.32
SEMA4D-216ENST00000474258 IFITM1P13164 125 aa6.8□□□□□ -1.32
SEMA4D-216ENST00000474258 HINT1P49773 126 aaPredicted RBP6.8□□□□□ -1.32
SEMA4D-216ENST00000474258 COX17Q14061 63 aa6.8□□□□□ -1.32
SEMA4D-216ENST00000474258 C10orf25Q5T742 122 aa6.8□□□□□ -1.32
SEMA4D-216ENST00000474258 UNQ6190/PRO20217Q6UXQ8 127 aa6.8□□□□□ -1.32
SEMA4D-216ENST00000474258 ERG28Q9UKR5 140 aa6.8□□□□□ -1.32
SEMA4D-216ENST00000474258 TRBV30A0A0K0K1B3 111 aa6.79□□□□□ -1.32
SEMA4D-216ENST00000474258 SMIM13P0DJ93 91 aa6.79□□□□□ -1.32
SEMA4D-216ENST00000474258 MEIG1Q5JSS6 88 aa6.79□□□□□ -1.32
SEMA4D-216ENST00000474258 C1orf137Q5JT78 98 aa6.79□□□□□ -1.32
SEMA4D-216ENST00000474258 PHF5AQ7RTV0 110 aaKnown RBP6.79□□□□□ -1.32
SEMA4D-216ENST00000474258 LOC107984156A0A0G2JMH3 177 aa6.78□□□□□ -1.32
SEMA4D-216ENST00000474258 TLX1NBP0CAT3 122 aa6.78□□□□□ -1.32
SEMA4D-216ENST00000474258 MUSTN1Q8IVN3 82 aa6.78□□□□□ -1.32
SEMA4D-216ENST00000474258 ARL17AQ8IVW1 177 aa6.78□□□□□ -1.32
SEMA4D-216ENST00000474258 C6orf48Q9UBA6 75 aa6.78□□□□□ -1.32
SEMA4D-216ENST00000474258 FXYD2P54710 66 aa6.77□□□□□ -1.33
SEMA4D-216ENST00000474258 LINC00158P58513 81 aa6.77□□□□□ -1.33
SEMA4D-216ENST00000474258 LBHQ53QV2 105 aaPredicted RBP6.77□□□□□ -1.33
SEMA4D-216ENST00000474258 LINC00308Q8TCZ7 52 aa6.77□□□□□ -1.33
SEMA4D-216ENST00000474258 A0A1B0GWB2 263 aa6.76□□□□□ -1.33
SEMA4D-216ENST00000474258 PFN2P35080 140 aa6.76□□□□□ -1.33
SEMA4D-216ENST00000474258 RPL24P83731 157 aaKnown RBP6.76□□□□□ -1.33
SEMA4D-216ENST00000474258 MIR7-3HGQ8N6C7 128 aa6.76□□□□□ -1.33
SEMA4D-216ENST00000474258 COPS9Q8WXC6 57 aa6.76□□□□□ -1.33
SEMA4D-216ENST00000474258 LRP2P98164 4655 aa6.76□□□□□ -1.33
SEMA4D-216ENST00000474258 A0A0U1RRA0 63 aa6.75□□□□□ -1.33
SEMA4D-216ENST00000474258 FAM168BA1KXE4 195 aa6.75□□□□□ -1.33
SEMA4D-216ENST00000474258 EIF4EBP3O60516 100 aaPredicted RBP6.75□□□□□ -1.33
SEMA4D-216ENST00000474258 IGLV7-43P04211 117 aa6.75□□□□□ -1.33
SEMA4D-216ENST00000474258 GAGE2EQ4V326 116 aa6.75□□□□□ -1.33
SEMA4D-216ENST00000474258 COL5A1-AS1Q5SY13 56 aa6.75□□□□□ -1.33
SEMA4D-216ENST00000474258 SOSTDC1Q6X4U4 206 aa6.75□□□□□ -1.33
SEMA4D-216ENST00000474258 DAND5Q8N907 189 aa6.75□□□□□ -1.33
SEMA4D-216ENST00000474258 DIRC1Q969H9 104 aa6.75□□□□□ -1.33
SEMA4D-216ENST00000474258 GAGE2DQ9UEU5 116 aa6.75□□□□□ -1.33
SEMA4D-216ENST00000474258 TMEM238LA0A1B0GVL6 79 aa6.74□□□□□ -1.33
SEMA4D-216ENST00000474258 A4D1N5 150 aa6.74□□□□□ -1.33
SEMA4D-216ENST00000474258 A6NDN8 102 aa6.74□□□□□ -1.33
SEMA4D-216ENST00000474258 A6NJY4 79 aa6.74□□□□□ -1.33
SEMA4D-216ENST00000474258 BATFQ16520 125 aa6.74□□□□□ -1.33
SEMA4D-216ENST00000474258 FAM19A5Q7Z5A7 132 aaPredicted RBP6.74□□□□□ -1.33
SEMA4D-216ENST00000474258 NDUFC2-KCTD14E9PQ53 114 aa6.72□□□□□ -1.33
SEMA4D-216ENST00000474258 CFC1BP0CG36 223 aa6.72□□□□□ -1.33
SEMA4D-216ENST00000474258 CFC1P0CG37 223 aa6.72□□□□□ -1.33
SEMA4D-216ENST00000474258 KRTAP11-1Q8IUC1 163 aa6.72□□□□□ -1.33
SEMA4D-216ENST00000474258 SND1-IT1Q9HBX3 110 aa6.72□□□□□ -1.33
SEMA4D-216ENST00000474258 A0A0B4J2C4 111 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms