RNA–Protein interactions for RNA: ENST00000474025.1

SNRNP40-204, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 3

Gene SNRNP40, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-204ENST00000474025 SCO1O75880 301 aa2.89□□□□□ -1.95
SNRNP40-204ENST00000474025 IGKV2D-28P01615 120 aa2.89□□□□□ -1.95
SNRNP40-204ENST00000474025 SRP19P09132 144 aaKnown RBP2.89□□□□□ -1.95
SNRNP40-204ENST00000474025 CXCL5P42830 114 aa2.89□□□□□ -1.95
SNRNP40-204ENST00000474025 RPL23P62829 140 aaKnown RBP2.89□□□□□ -1.95
SNRNP40-204ENST00000474025 PRLHP81277 87 aa2.89□□□□□ -1.95
SNRNP40-204ENST00000474025 MRPL54Q6P161 138 aaKnown RBP2.89□□□□□ -1.95
SNRNP40-204ENST00000474025 SPAG11AQ6PDA7 123 aa2.89□□□□□ -1.95
SNRNP40-204ENST00000474025 ALKAL2Q6UX46 152 aa2.89□□□□□ -1.95
SNRNP40-204ENST00000474025 C2orf66Q6UXQ4 117 aa2.89□□□□□ -1.95
SNRNP40-204ENST00000474025 TCTE3Q8IZS6 198 aa2.89□□□□□ -1.95
SNRNP40-204ENST00000474025 ORMDL3Q8N138 153 aa2.89□□□□□ -1.95
SNRNP40-204ENST00000474025 NKAPP1Q8N9T2 125 aa2.89□□□□□ -1.95
SNRNP40-204ENST00000474025 CDKN2A-AS1Q9UH64 79 aa2.89□□□□□ -1.95
SNRNP40-204ENST00000474025 IGIPA6NJ69 53 aa2.88□□□□□ -1.95
SNRNP40-204ENST00000474025 SMIM1B2RUZ4 78 aa2.88□□□□□ -1.95
SNRNP40-204ENST00000474025 S100A8P05109 93 aa2.88□□□□□ -1.95
SNRNP40-204ENST00000474025 HERVK_113P63121 156 aa2.88□□□□□ -1.95
SNRNP40-204ENST00000474025 ADIRFQ15847 76 aa2.88□□□□□ -1.95
SNRNP40-204ENST00000474025 KRTAP19-2Q3LHN2 52 aa2.88□□□□□ -1.95
SNRNP40-204ENST00000474025 TMEM136Q6ZRR5 245 aa2.88□□□□□ -1.95
SNRNP40-204ENST00000474025 Q75L30 129 aa2.88□□□□□ -1.95
SNRNP40-204ENST00000474025 PLEKHB2Q96CS7 222 aa2.88□□□□□ -1.95
SNRNP40-204ENST00000474025 PRELID3AQ96N28 172 aa2.88□□□□□ -1.95
SNRNP40-204ENST00000474025 TMEM126AQ9H061 195 aa2.88□□□□□ -1.95
SNRNP40-204ENST00000474025 CYSLTR1Q9Y271 337 aa2.88□□□□□ -1.95
SNRNP40-204ENST00000474025 LOC389332A0A1B0GUA5 103 aa2.87□□□□□ -1.95
SNRNP40-204ENST00000474025 TMEM238C9JI98 176 aa2.87□□□□□ -1.95
SNRNP40-204ENST00000474025 HSBP1O75506 76 aa2.87□□□□□ -1.95
SNRNP40-204ENST00000474025 SEC11AP67812 179 aa2.87□□□□□ -1.95
SNRNP40-204ENST00000474025 MT1HP80294 61 aa2.87□□□□□ -1.95
SNRNP40-204ENST00000474025 C5orf47Q569G3 176 aa2.87□□□□□ -1.95
SNRNP40-204ENST00000474025 FAM19A1Q7Z5A9 133 aa2.87□□□□□ -1.95
SNRNP40-204ENST00000474025 C9JQL5 133 aa2.86□□□□□ -1.95
SNRNP40-204ENST00000474025 M0R378 163 aa2.86□□□□□ -1.95
SNRNP40-204ENST00000474025 RAB5BP61020 215 aa2.86□□□□□ -1.95
SNRNP40-204ENST00000474025 S100A12P80511 92 aa2.86□□□□□ -1.95
SNRNP40-204ENST00000474025 ORMDL2Q53FV1 153 aa2.86□□□□□ -1.95
SNRNP40-204ENST00000474025 ATP5L2Q7Z4Y8 100 aa2.86□□□□□ -1.95
SNRNP40-204ENST00000474025 CBLN2Q8IUK8 224 aa2.86□□□□□ -1.95
SNRNP40-204ENST00000474025 Q8N8P6 123 aa2.86□□□□□ -1.95
SNRNP40-204ENST00000474025 COX7B2Q8TF08 81 aa2.86□□□□□ -1.95
SNRNP40-204ENST00000474025 SPRR4Q96PI1 79 aa2.86□□□□□ -1.95
SNRNP40-204ENST00000474025 GNB1LQ9BYB4 327 aa2.86□□□□□ -1.95
SNRNP40-204ENST00000474025 MAP1LC3AQ9H492 121 aa2.86□□□□□ -1.95
SNRNP40-204ENST00000474025 NAT8Q9UHE5 227 aa2.86□□□□□ -1.95
SNRNP40-204ENST00000474025 LAMTOR2Q9Y2Q5 125 aa2.86□□□□□ -1.95
SNRNP40-204ENST00000474025 IGLV5-45A0A087WSX0 123 aa2.85□□□□□ -1.95
SNRNP40-204ENST00000474025 K7EMI3 77 aa2.85□□□□□ -1.95
SNRNP40-204ENST00000474025 PDZD11Q5EBL8 140 aa2.85□□□□□ -1.95
SNRNP40-204ENST00000474025 PAPPA-AS1Q5QFB9 102 aa2.85□□□□□ -1.95
SNRNP40-204ENST00000474025 DAND5Q8N907 189 aa2.85□□□□□ -1.95
SNRNP40-204ENST00000474025 Q8NBF4 154 aa2.85□□□□□ -1.95
SNRNP40-204ENST00000474025 Q8NDZ9 215 aa2.85□□□□□ -1.95
SNRNP40-204ENST00000474025 TIMM17AQ99595 171 aa2.85□□□□□ -1.95
SNRNP40-204ENST00000474025 HIGD2AQ9BW72 106 aa2.85□□□□□ -1.95
SNRNP40-204ENST00000474025 TINCRA0A1B0GVN0 87 aa2.84□□□□□ -1.95
SNRNP40-204ENST00000474025 SPINK1P00995 79 aa2.84□□□□□ -1.95
SNRNP40-204ENST00000474025 SPINK8P0C7L1 97 aa2.84□□□□□ -1.95
SNRNP40-204ENST00000474025 TOMM6Q96B49 74 aa2.84□□□□□ -1.95
SNRNP40-204ENST00000474025 MAP1LC3CQ9BXW4 147 aa2.84□□□□□ -1.95
SNRNP40-204ENST00000474025 SND1-IT1Q9HBX3 110 aa2.84□□□□□ -1.95
SNRNP40-204ENST00000474025 USH2AO75445 5202 aa2.84□□□□□ -1.96
SNRNP40-204ENST00000474025 SSPOA2VEC9 5147 aa2.83□□□□□ -1.96
SNRNP40-204ENST00000474025 ATP5LO75964 103 aa2.83□□□□□ -1.96
SNRNP40-204ENST00000474025 PFN2P35080 140 aa2.83□□□□□ -1.96
SNRNP40-204ENST00000474025 KRTAP10-6P60371 365 aaPredicted RBP2.83□□□□□ -1.96
SNRNP40-204ENST00000474025 UQCC3Q6UW78 93 aa2.83□□□□□ -1.96
SNRNP40-204ENST00000474025 Q8N377 158 aa2.83□□□□□ -1.96
SNRNP40-204ENST00000474025 NXT2Q9NPJ8 142 aaKnown RBP2.83□□□□□ -1.96
SNRNP40-204ENST00000474025 NDUFA12Q9UI09 145 aa2.83□□□□□ -1.96
SNRNP40-204ENST00000474025 ZNF706Q9Y5V0 76 aaPredicted RBP2.83□□□□□ -1.96
SNRNP40-204ENST00000474025 IGLV5-39A0A0G2JS06 123 aa2.82□□□□□ -1.96
SNRNP40-204ENST00000474025 ADCYAP1P18509 176 aa2.82□□□□□ -1.96
SNRNP40-204ENST00000474025 G0S2P27469 103 aa2.82□□□□□ -1.96
SNRNP40-204ENST00000474025 RPS29P62273 56 aaKnown RBP2.82□□□□□ -1.96
SNRNP40-204ENST00000474025 RPL24P83731 157 aaKnown RBP2.82□□□□□ -1.96
SNRNP40-204ENST00000474025 LINC00483Q53H64 154 aa2.82□□□□□ -1.96
SNRNP40-204ENST00000474025 FAM19A2Q8N3H0 131 aa2.82□□□□□ -1.96
SNRNP40-204ENST00000474025 MPLKIPQ8TAP9 179 aa2.82□□□□□ -1.96
SNRNP40-204ENST00000474025 SCGB3A1Q96QR1 104 aa2.82□□□□□ -1.96
SNRNP40-204ENST00000474025 CST9LQ9H4G1 147 aa2.82□□□□□ -1.96
SNRNP40-204ENST00000474025 ERG28Q9UKR5 140 aa2.82□□□□□ -1.96
SNRNP40-204ENST00000474025 COX17Q14061 63 aa2.81□□□□□ -1.96
SNRNP40-204ENST00000474025 LOC105371267A0A1B0GV96 52 aa2.8□□□□□ -1.96
SNRNP40-204ENST00000474025 KRTAP4-16G5E9R7 235 aaPredicted RBP2.8□□□□□ -1.96
SNRNP40-204ENST00000474025 H3BRM9 83 aa2.8□□□□□ -1.96
SNRNP40-204ENST00000474025 M0R2T5 61 aa2.8□□□□□ -1.96
SNRNP40-204ENST00000474025 SLC25A20O43772 301 aa2.8□□□□□ -1.96
SNRNP40-204ENST00000474025 MOBPQ13875 183 aa2.8□□□□□ -1.96
SNRNP40-204ENST00000474025 PEA15Q15121 130 aa2.8□□□□□ -1.96
SNRNP40-204ENST00000474025 COX19Q49B96 90 aa2.8□□□□□ -1.96
SNRNP40-204ENST00000474025 PCOTHQ58A44 107 aa2.8□□□□□ -1.96
SNRNP40-204ENST00000474025 LINC00518Q8N0U6 118 aa2.8□□□□□ -1.96
SNRNP40-204ENST00000474025 URB1-AS1Q96HZ7 61 aa2.8□□□□□ -1.96
SNRNP40-204ENST00000474025 V9GYY9 64 aa2.8□□□□□ -1.96
SNRNP40-204ENST00000474025 IGLV8-61A0A075B6I0 122 aa2.79□□□□□ -1.96
SNRNP40-204ENST00000474025 IGLC3P0DOY3 106 aa2.79□□□□□ -1.96
SNRNP40-204ENST00000474025 ZNF22P17026 224 aaPredicted RBP2.79□□□□□ -1.96
SNRNP40-204ENST00000474025 SPRR1AP35321 89 aa2.79□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms