RNA–Protein interactions for RNA: ENST00000473969.6

USF1-205, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 1,092 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-205ENST00000473969 SND1-IT1Q9HBX3 110 aa8.52□□□□□ -1.05
USF1-205ENST00000473969 TP73-AS1Q9UF72 201 aa8.52□□□□□ -1.05
USF1-205ENST00000473969 C3orf79P0CE67 100 aa8.51□□□□□ -1.05
USF1-205ENST00000473969 NMUP48645 174 aa8.51□□□□□ -1.05
USF1-205ENST00000473969 LINC01545Q5VT33 79 aa8.51□□□□□ -1.05
USF1-205ENST00000473969 SPINK6Q6UWN8 80 aa8.51□□□□□ -1.05
USF1-205ENST00000473969 KRTAP7-1Q8IUC3 87 aa8.51□□□□□ -1.05
USF1-205ENST00000473969 OXTP01178 125 aa8.5□□□□□ -1.05
USF1-205ENST00000473969 SMIM13P0DJ93 91 aa8.5□□□□□ -1.05
USF1-205ENST00000473969 FLG2Q5D862 2391 aaPredicted RBP8.5□□□□□ -1.05
USF1-205ENST00000473969 KRTAP29-1A8MX34 341 aaPredicted RBP8.49□□□□□ -1.05
USF1-205ENST00000473969 AKR1D1P51857 326 aa8.49□□□□□ -1.05
USF1-205ENST00000473969 E9PLD3 99 aa8.48□□□□□ -1.05
USF1-205ENST00000473969 IGLV5-37A0A075B6J1 123 aa8.47□□□□□ -1.05
USF1-205ENST00000473969 GAGE10A6NGK3 116 aa8.47□□□□□ -1.05
USF1-205ENST00000473969 IGLV7-43P04211 117 aa8.47□□□□□ -1.05
USF1-205ENST00000473969 TSPEAR-AS2P59090 65 aa8.47□□□□□ -1.05
USF1-205ENST00000473969 REG3GQ6UW15 175 aa8.47□□□□□ -1.05
USF1-205ENST00000473969 LINC00167Q96N53 147 aa8.47□□□□□ -1.05
USF1-205ENST00000473969 MIR7-3HGQ8N6C7 128 aa8.46□□□□□ -1.06
USF1-205ENST00000473969 RPL37AP8A6NKH3 93 aa8.45□□□□□ -1.06
USF1-205ENST00000473969 SRSF9Q13242 221 aaKnown RBP eCLIP8.45□□□□□ -1.06
USF1-205ENST00000473969 KRTAP11-1Q8IUC1 163 aa8.45□□□□□ -1.06
USF1-205ENST00000473969 HIST3H2BBQ8N257 126 aa8.45□□□□□ -1.06
USF1-205ENST00000473969 VPREB1P12018 145 aa8.44□□□□□ -1.06
USF1-205ENST00000473969 BOD1L2Q8IYS8 172 aa8.44□□□□□ -1.06
USF1-205ENST00000473969 DIRC1Q969H9 104 aa8.44□□□□□ -1.06
USF1-205ENST00000473969 MIEN1Q9BRT3 115 aa8.44□□□□□ -1.06
USF1-205ENST00000473969 DMBT1Q9UGM3 2413 aaPredicted RBP8.42□□□□□ -1.06
USF1-205ENST00000473969 IGKV2-28A0A075B6P5 120 aa8.42□□□□□ -1.06
USF1-205ENST00000473969 IGKV2D-28P01615 120 aa8.42□□□□□ -1.06
USF1-205ENST00000473969 HIST1H2BLQ99880 126 aa8.42□□□□□ -1.06
USF1-205ENST00000473969 M0R378 163 aa8.41□□□□□ -1.06
USF1-205ENST00000473969 BCE1O60756 84 aa8.41□□□□□ -1.06
USF1-205ENST00000473969 SNRPEP62304 92 aaKnown RBP8.41□□□□□ -1.06
USF1-205ENST00000473969 A0A0J9YXY3 114 aa8.4□□□□□ -1.06
USF1-205ENST00000473969 ZNF815PA8K554 130 aa8.4□□□□□ -1.06
USF1-205ENST00000473969 RPL28P46779 137 aaKnown RBP8.4□□□□□ -1.06
USF1-205ENST00000473969 ATOH7Q8N100 152 aa8.4□□□□□ -1.06
USF1-205ENST00000473969 DAND5Q8N907 189 aa8.4□□□□□ -1.06
USF1-205ENST00000473969 MYCBP2O75592 4640 aa8.39□□□□□ -1.07
USF1-205ENST00000473969 IGLV1-50A0A075B6I6 118 aa8.39□□□□□ -1.07
USF1-205ENST00000473969 ZNF861PO60384 105 aa8.39□□□□□ -1.07
USF1-205ENST00000473969 UBE2AP49459 152 aa8.39□□□□□ -1.07
USF1-205ENST00000473969 S100A12P80511 92 aa8.39□□□□□ -1.07
USF1-205ENST00000473969 IGKV2D-26A0A0A0MRZ7 120 aa8.38□□□□□ -1.07
USF1-205ENST00000473969 HSBP1L1C9JCN9 74 aa8.38□□□□□ -1.07
USF1-205ENST00000473969 H0Y9J4 135 aa8.38□□□□□ -1.07
USF1-205ENST00000473969 NCR3O14931 201 aa8.38□□□□□ -1.07
USF1-205ENST00000473969 LINC01600Q96MT4 127 aa8.38□□□□□ -1.07
USF1-205ENST00000473969 UBR4Q5T4S7 5183 aa8.38□□□□□ -1.07
USF1-205ENST00000473969 SCGB1D4Q6XE38 83 aa8.37□□□□□ -1.07
USF1-205ENST00000473969 Q8NDZ9 215 aa8.37□□□□□ -1.07
USF1-205ENST00000473969 LOC107984156A0A0G2JMH3 177 aa8.36□□□□□ -1.07
USF1-205ENST00000473969 TIMM17BO60830 172 aa8.36□□□□□ -1.07
USF1-205ENST00000473969 ARL17AQ8IVW1 177 aa8.36□□□□□ -1.07
USF1-205ENST00000473969 PKHD1L1Q86WI1 4243 aa8.35□□□□□ -1.07
USF1-205ENST00000473969 C5orf52A6NGY3 159 aa8.35□□□□□ -1.07
USF1-205ENST00000473969 SCGB1D1O95968 90 aa8.35□□□□□ -1.07
USF1-205ENST00000473969 NPC2P61916 151 aa8.35□□□□□ -1.07
USF1-205ENST00000473969 FAM19A1Q7Z5A9 133 aa8.35□□□□□ -1.07
USF1-205ENST00000473969 TMEM126AQ9H061 195 aa8.35□□□□□ -1.07
USF1-205ENST00000473969 TMEM238C9JI98 176 aa8.34□□□□□ -1.07
USF1-205ENST00000473969 ANKRD39Q53RE8 183 aa8.34□□□□□ -1.07
USF1-205ENST00000473969 ADAMTSL4-AS1Q5T5F5 129 aa8.34□□□□□ -1.07
USF1-205ENST00000473969 TTTY13Q9BZ97 58 aa8.34□□□□□ -1.07
USF1-205ENST00000473969 SPANXB1Q9NS25 103 aaPredicted RBP8.34□□□□□ -1.07
USF1-205ENST00000473969 TRBV10-2A0A0K0K1G8 114 aa8.33□□□□□ -1.08
USF1-205ENST00000473969 NDUFC2O95298 119 aa8.33□□□□□ -1.08
USF1-205ENST00000473969 S100A7L2Q5SY68 101 aa8.33□□□□□ -1.08
USF1-205ENST00000473969 COPS9Q8WXC6 57 aa8.33□□□□□ -1.08
USF1-205ENST00000473969 PRYO14603 147 aa8.32□□□□□ -1.08
USF1-205ENST00000473969 TRBV10-3A0A0K0K1G6 114 aa8.31□□□□□ -1.08
USF1-205ENST00000473969 DDTP30046 118 aa8.31□□□□□ -1.08
USF1-205ENST00000473969 LINC00308Q8TCZ7 52 aa8.31□□□□□ -1.08
USF1-205ENST00000473969 LRP1Q07954 4544 aaKnown RBP8.31□□□□□ -1.08
USF1-205ENST00000473969 MT1HL1P0DM35 61 aa8.3□□□□□ -1.08
USF1-205ENST00000473969 LITAFQ99732 161 aa8.3□□□□□ -1.08
USF1-205ENST00000473969 CBY1Q9Y3M2 126 aa8.3□□□□□ -1.08
USF1-205ENST00000473969 FAT3Q8TDW7 4589 aa8.3□□□□□ -1.08
USF1-205ENST00000473969 ETDCA0A1B0GVM5 59 aa8.29□□□□□ -1.08
USF1-205ENST00000473969 PRLHP81277 87 aa8.29□□□□□ -1.08
USF1-205ENST00000473969 SOSTDC1Q6X4U4 206 aa8.29□□□□□ -1.08
USF1-205ENST00000473969 PCP2Q8IVA1 136 aa8.29□□□□□ -1.08
USF1-205ENST00000473969 KCNQ1DNQ9H478 68 aa8.29□□□□□ -1.08
USF1-205ENST00000473969 SPANXCQ9NY87 97 aa8.29□□□□□ -1.08
USF1-205ENST00000473969 Q6ZVH6 145 aa8.28□□□□□ -1.08
USF1-205ENST00000473969 SPANXDQ9BXN6 97 aa8.28□□□□□ -1.08
USF1-205ENST00000473969 IFITM1P13164 125 aa8.27□□□□□ -1.09
USF1-205ENST00000473969 RPL13AP40429 203 aaKnown RBP8.27□□□□□ -1.09
USF1-205ENST00000473969 KRTAP10-8P60410 259 aa8.27□□□□□ -1.09
USF1-205ENST00000473969 KRTAP13-1Q8IUC0 172 aa8.27□□□□□ -1.09
USF1-205ENST00000473969 LINC00337Q8N6G1 96 aa8.27□□□□□ -1.09
USF1-205ENST00000473969 PRR26Q8N8Z3 221 aa8.27□□□□□ -1.09
USF1-205ENST00000473969 OR13C6PQ8NH95 151 aa8.27□□□□□ -1.09
USF1-205ENST00000473969 HIGD2AQ9BW72 106 aa8.27□□□□□ -1.09
USF1-205ENST00000473969 LINC00518Q8N0U6 118 aa8.26□□□□□ -1.09
USF1-205ENST00000473969 EIF4EBP3O60516 100 aaPredicted RBP8.25□□□□□ -1.09
USF1-205ENST00000473969 KRTAP1-4P0C5Y4 121 aa8.25□□□□□ -1.09
USF1-205ENST00000473969 HINT1P49773 126 aaPredicted RBP8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms