RNA–Protein interactions for RNA: ENST00000473782.1

HPS4-210, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-210ENST00000473782 MAP1LC3AQ9H492 121 aa8.64□□□□□ -1.03
HPS4-210ENST00000473782 IGLV9-49A0A0B4J1Y8 123 aa8.63□□□□□ -1.03
HPS4-210ENST00000473782 KRTAP9-8Q9BYQ0 159 aa8.63□□□□□ -1.03
HPS4-210ENST00000473782 C9orf92A6NGG3 77 aa8.62□□□□□ -1.03
HPS4-210ENST00000473782 ATP5LO75964 103 aa8.62□□□□□ -1.03
HPS4-210ENST00000473782 SPRR1AP35321 89 aa8.62□□□□□ -1.03
HPS4-210ENST00000473782 ADIRFQ15847 76 aa8.62□□□□□ -1.03
HPS4-210ENST00000473782 KRTAP19-1Q8IUB9 90 aa8.62□□□□□ -1.03
HPS4-210ENST00000473782 LAMTOR2Q9Y2Q5 125 aa8.62□□□□□ -1.03
HPS4-210ENST00000473782 C9JQL5 133 aa8.61□□□□□ -1.03
HPS4-210ENST00000473782 ADCYAP1P18509 176 aa8.61□□□□□ -1.03
HPS4-210ENST00000473782 PAPPA-AS1Q5QFB9 102 aa8.61□□□□□ -1.03
HPS4-210ENST00000473782 GAGE2AQ6NT46 116 aa8.61□□□□□ -1.03
HPS4-210ENST00000473782 ALKAL2Q6UX46 152 aa8.61□□□□□ -1.03
HPS4-210ENST00000473782 TOMM6Q96B49 74 aa8.61□□□□□ -1.03
HPS4-210ENST00000473782 COX6B2Q6YFQ2 88 aa8.6□□□□□ -1.03
HPS4-210ENST00000473782 ERG28Q9UKR5 140 aa8.6□□□□□ -1.03
HPS4-210ENST00000473782 ERC2-IT1O76042 136 aa8.59□□□□□ -1.03
HPS4-210ENST00000473782 AKAP14Q86UN6 197 aa8.59□□□□□ -1.03
HPS4-210ENST00000473782 IGLV5-39A0A0G2JS06 123 aa8.58□□□□□ -1.04
HPS4-210ENST00000473782 K7EMI3 77 aa8.58□□□□□ -1.04
HPS4-210ENST00000473782 COX17Q14061 63 aa8.57□□□□□ -1.04
HPS4-210ENST00000473782 ERASQ7Z444 233 aa8.57□□□□□ -1.04
HPS4-210ENST00000473782 ATP5L2Q7Z4Y8 100 aa8.57□□□□□ -1.04
HPS4-210ENST00000473782 CST9LQ9H4G1 147 aa8.57□□□□□ -1.04
HPS4-210ENST00000473782 NAT8Q9UHE5 227 aa8.57□□□□□ -1.04
HPS4-210ENST00000473782 PRYO14603 147 aa8.56□□□□□ -1.04
HPS4-210ENST00000473782 KCNQ1DNQ9H478 68 aa8.56□□□□□ -1.04
HPS4-210ENST00000473782 ZNF625Q96I27 306 aaPredicted RBP8.55□□□□□ -1.04
HPS4-210ENST00000473782 TCTE3Q8IZS6 198 aa8.54□□□□□ -1.04
HPS4-210ENST00000473782 MRPL18Q9H0U6 180 aaKnown RBP8.54□□□□□ -1.04
HPS4-210ENST00000473782 SCGB3A1Q96QR1 104 aa8.53□□□□□ -1.04
HPS4-210ENST00000473782 NXT2Q9NPJ8 142 aaKnown RBP8.53□□□□□ -1.04
HPS4-210ENST00000473782 CFC1P0CG37 223 aa8.52□□□□□ -1.05
HPS4-210ENST00000473782 LCE2BO14633 110 aa8.51□□□□□ -1.05
HPS4-210ENST00000473782 B5MCH6 92 aa8.5□□□□□ -1.05
HPS4-210ENST00000473782 IGLV6-57P01721 117 aa8.5□□□□□ -1.05
HPS4-210ENST00000473782 Q9BRP9 147 aa8.5□□□□□ -1.05
HPS4-210ENST00000473782 ETDCA0A1B0GVM5 59 aa8.49□□□□□ -1.05
HPS4-210ENST00000473782 H3BRM9 83 aa8.48□□□□□ -1.05
HPS4-210ENST00000473782 G0S2P27469 103 aa8.48□□□□□ -1.05
HPS4-210ENST00000473782 RPL37P61927 97 aaKnown RBP8.48□□□□□ -1.05
HPS4-210ENST00000473782 IGLC3P0DOY3 106 aa8.47□□□□□ -1.05
HPS4-210ENST00000473782 PMVKQ15126 192 aa8.47□□□□□ -1.05
HPS4-210ENST00000473782 ZNF22P17026 224 aaPredicted RBP8.46□□□□□ -1.06
HPS4-210ENST00000473782 TRBV10-3A0A0K0K1G6 114 aa8.45□□□□□ -1.06
HPS4-210ENST00000473782 NCR3O14931 201 aa8.45□□□□□ -1.06
HPS4-210ENST00000473782 C9orf153Q5TBE3 101 aa8.45□□□□□ -1.06
HPS4-210ENST00000473782 LINC01546A6NGU7 62 aa8.44□□□□□ -1.06
HPS4-210ENST00000473782 A0A0U1RRA0 63 aa8.43□□□□□ -1.06
HPS4-210ENST00000473782 LINC00158P58513 81 aa8.43□□□□□ -1.06
HPS4-210ENST00000473782 TRAV9-1A0A075B6T8 112 aa8.41□□□□□ -1.06
HPS4-210ENST00000473782 HRCT1Q6UXD1 115 aa8.41□□□□□ -1.06
HPS4-210ENST00000473782 BOD1L2Q8IYS8 172 aa8.41□□□□□ -1.06
HPS4-210ENST00000473782 KIAA1644Q3SXP7 199 aa8.4□□□□□ -1.06
HPS4-210ENST00000473782 MT2AP02795 61 aa8.39□□□□□ -1.07
HPS4-210ENST00000473782 Q6ZRX8 168 aa8.39□□□□□ -1.07
HPS4-210ENST00000473782 ST20-AS1Q8NBB2 130 aa8.39□□□□□ -1.07
HPS4-210ENST00000473782 LIMD2Q9BT23 127 aa8.39□□□□□ -1.07
HPS4-210ENST00000473782 Q6Q795 121 aa8.37□□□□□ -1.07
HPS4-210ENST00000473782 KRTAP9-3Q9BYQ3 159 aa8.37□□□□□ -1.07
HPS4-210ENST00000473782 LINC01549A6NIU2 74 aa8.36□□□□□ -1.07
HPS4-210ENST00000473782 SMIM13P0DJ93 91 aa8.36□□□□□ -1.07
HPS4-210ENST00000473782 SFTA2Q6UW10 78 aa8.36□□□□□ -1.07
HPS4-210ENST00000473782 CHTOPQ9Y3Y2 248 aaKnown RBP8.36□□□□□ -1.07
HPS4-210ENST00000473782 C11orf86A6NJI1 115 aa8.35□□□□□ -1.07
HPS4-210ENST00000473782 PEA15Q15121 130 aa8.35□□□□□ -1.07
HPS4-210ENST00000473782 MT1FP04733 61 aa8.34□□□□□ -1.07
HPS4-210ENST00000473782 MIR7-3HGQ8N6C7 128 aa8.34□□□□□ -1.07
HPS4-210ENST00000473782 A0A096LNJ9 63 aa8.33□□□□□ -1.08
HPS4-210ENST00000473782 KRTAP6-3Q3LI67 103 aa8.33□□□□□ -1.08
HPS4-210ENST00000473782 C1orf195Q5TG92 126 aa8.33□□□□□ -1.08
HPS4-210ENST00000473782 NEBP20929 6669 aa8.33□□□□□ -1.08
HPS4-210ENST00000473782 DDTP30046 118 aa8.3□□□□□ -1.08
HPS4-210ENST00000473782 NDUFA6P56556 154 aa8.3□□□□□ -1.08
HPS4-210ENST00000473782 SPRR1BP22528 89 aa8.29□□□□□ -1.08
HPS4-210ENST00000473782 TMEM170BQ5T4T1 132 aa8.29□□□□□ -1.08
HPS4-210ENST00000473782 KRTAP19-6Q3LI70 58 aa8.28□□□□□ -1.08
HPS4-210ENST00000473782 Q5XG85 94 aa8.28□□□□□ -1.08
HPS4-210ENST00000473782 ANAPC16Q96DE5 110 aa8.28□□□□□ -1.08
HPS4-210ENST00000473782 LOC107984156A0A0G2JMH3 177 aa8.26□□□□□ -1.09
HPS4-210ENST00000473782 TRBV10-2A0A0K0K1G8 114 aa8.26□□□□□ -1.09
HPS4-210ENST00000473782 H7C2G1 150 aa8.26□□□□□ -1.09
HPS4-210ENST00000473782 S100A12P80511 92 aa8.26□□□□□ -1.09
HPS4-210ENST00000473782 CD164Q04900 197 aa8.26□□□□□ -1.09
HPS4-210ENST00000473782 ARL17AQ8IVW1 177 aa8.26□□□□□ -1.09
HPS4-210ENST00000473782 TMEM223A0PJW6 202 aa8.25□□□□□ -1.09
HPS4-210ENST00000473782 C5orf52A6NGY3 159 aa8.25□□□□□ -1.09
HPS4-210ENST00000473782 ATP6V1G1O75348 118 aa8.25□□□□□ -1.09
HPS4-210ENST00000473782 KRTAP3-3Q9BYR6 98 aa8.25□□□□□ -1.09
HPS4-210ENST00000473782 KRTAP3-2Q9BYR7 98 aa8.25□□□□□ -1.09
HPS4-210ENST00000473782 MT-ND4LP03901 98 aa8.24□□□□□ -1.09
HPS4-210ENST00000473782 MEIG1Q5JSS6 88 aa8.24□□□□□ -1.09
HPS4-210ENST00000473782 FA2HQ7L5A8 372 aa8.24□□□□□ -1.09
HPS4-210ENST00000473782 JOSD1Q15040 202 aaPredicted RBP8.23□□□□□ -1.09
HPS4-210ENST00000473782 BAGE3Q86Y29 109 aa8.23□□□□□ -1.09
HPS4-210ENST00000473782 URB1-AS1Q96HZ7 61 aa8.23□□□□□ -1.09
HPS4-210ENST00000473782 SMIM29Q86T20 159 aa8.21□□□□□ -1.1
HPS4-210ENST00000473782 TRAV23DV6A0A075B6W5 121 aa8.19□□□□□ -1.1
HPS4-210ENST00000473782 ZNF73O43830 326 aaPredicted RBP8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms