RNA–Protein interactions for RNA: ENST00000473470.1

CNOT4-209, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 2

Gene CNOT4, Length 707 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-209ENST00000473470 SAR1AQ9NR31 198 aa1.37□□□□□ -2.19
CNOT4-209ENST00000473470 MED9Q9NWA0 146 aa1.37□□□□□ -2.19
CNOT4-209ENST00000473470 HIGD1AQ9Y241 93 aa1.37□□□□□ -2.19
CNOT4-209ENST00000473470 HIST1H1DP16402 221 aaKnown RBP1.36□□□□□ -2.19
CNOT4-209ENST00000473470 RPL7P18124 248 aaKnown RBP1.36□□□□□ -2.19
CNOT4-209ENST00000473470 DEFA1P59665 94 aa1.36□□□□□ -2.19
CNOT4-209ENST00000473470 RPL37P61927 97 aaKnown RBP1.36□□□□□ -2.19
CNOT4-209ENST00000473470 UBE2D2P62837 147 aa1.36□□□□□ -2.19
CNOT4-209ENST00000473470 PRLHP81277 87 aa1.36□□□□□ -2.19
CNOT4-209ENST00000473470 RBM3P98179 157 aaKnown RBP1.36□□□□□ -2.19
CNOT4-209ENST00000473470 IZUMO2Q6UXV1 221 aa1.36□□□□□ -2.19
CNOT4-209ENST00000473470 PATE2Q6UY27 113 aa1.36□□□□□ -2.19
CNOT4-209ENST00000473470 Q6ZQT0 140 aa1.36□□□□□ -2.19
CNOT4-209ENST00000473470 ARPINQ7Z6K5 226 aa1.36□□□□□ -2.19
CNOT4-209ENST00000473470 FXYD6Q9H0Q3 95 aa1.36□□□□□ -2.19
CNOT4-209ENST00000473470 SLC39A9Q9NUM3 307 aa1.36□□□□□ -2.19
CNOT4-209ENST00000473470 GABARAPH6UMI1 98 aa1.35□□□□□ -2.19
CNOT4-209ENST00000473470 TCL1BO95988 128 aa1.35□□□□□ -2.19
CNOT4-209ENST00000473470 FAM107AO95990 144 aa1.35□□□□□ -2.19
CNOT4-209ENST00000473470 CLVS1Q8IUQ0 354 aaPredicted RBP1.35□□□□□ -2.19
CNOT4-209ENST00000473470 NUP35Q8NFH5 326 aa1.35□□□□□ -2.19
CNOT4-209ENST00000473470 BTF3L4Q96K17 158 aa1.35□□□□□ -2.19
CNOT4-209ENST00000473470 ODF3Q96PU9 254 aa1.35□□□□□ -2.19
CNOT4-209ENST00000473470 IMUPQ9GZP8 106 aa1.35□□□□□ -2.19
CNOT4-209ENST00000473470 CCDC90BQ9GZT6 254 aa1.35□□□□□ -2.19
CNOT4-209ENST00000473470 RNASE7Q9H1E1 156 aaKnown RBP1.35□□□□□ -2.19
CNOT4-209ENST00000473470 ATG5Q9H1Y0 275 aa1.35□□□□□ -2.19
CNOT4-209ENST00000473470 COMMD3Q9UBI1 195 aa1.35□□□□□ -2.19
CNOT4-209ENST00000473470 IGKV3D-7A0A0C4DH55 119 aa1.34□□□□□ -2.19
CNOT4-209ENST00000473470 G3V2T6 193 aa1.34□□□□□ -2.19
CNOT4-209ENST00000473470 PDE6DO43924 150 aa1.34□□□□□ -2.19
CNOT4-209ENST00000473470 IAPPP10997 89 aa1.34□□□□□ -2.19
CNOT4-209ENST00000473470 TMEM78Q5T7P6 136 aa1.34□□□□□ -2.19
CNOT4-209ENST00000473470 SPAG11AQ6PDA7 123 aa1.34□□□□□ -2.19
CNOT4-209ENST00000473470 HRCT1Q6UXD1 115 aa1.34□□□□□ -2.19
CNOT4-209ENST00000473470 Q86TA4 180 aa1.34□□□□□ -2.19
CNOT4-209ENST00000473470 HIST3H2BBQ8N257 126 aa1.34□□□□□ -2.19
CNOT4-209ENST00000473470 OR5A1Q8NGJ0 315 aa1.34□□□□□ -2.19
CNOT4-209ENST00000473470 TRGV9Q99603 122 aa1.34□□□□□ -2.19
CNOT4-209ENST00000473470 HOPXQ9BPY8 73 aaPredicted RBP1.34□□□□□ -2.19
CNOT4-209ENST00000473470 SH3BGRL3Q9H299 93 aa1.34□□□□□ -2.19
CNOT4-209ENST00000473470 BCE1O60756 84 aa1.33□□□□□ -2.2
CNOT4-209ENST00000473470 HYPMO75409 117 aa1.33□□□□□ -2.2
CNOT4-209ENST00000473470 IL5P05113 134 aa1.33□□□□□ -2.2
CNOT4-209ENST00000473470 PYYP10082 97 aa1.33□□□□□ -2.2
CNOT4-209ENST00000473470 S100A5P33763 92 aa1.33□□□□□ -2.2
CNOT4-209ENST00000473470 PIGPP57054 158 aa1.33□□□□□ -2.2
CNOT4-209ENST00000473470 GNG2P59768 71 aa1.33□□□□□ -2.2
CNOT4-209ENST00000473470 NMSQ5H8A3 153 aa1.33□□□□□ -2.2
CNOT4-209ENST00000473470 DNAJC9Q8WXX5 260 aa1.33□□□□□ -2.2
CNOT4-209ENST00000473470 ANP32BQ92688 251 aaKnown RBP1.33□□□□□ -2.2
CNOT4-209ENST00000473470 TP53RKQ96S44 253 aa1.33□□□□□ -2.2
CNOT4-209ENST00000473470 TRBV10-1A0A0K0K1A3 114 aa1.32□□□□□ -2.2
CNOT4-209ENST00000473470 CCL25O15444 150 aa1.32□□□□□ -2.2
CNOT4-209ENST00000473470 FABP1P07148 127 aa1.32□□□□□ -2.2
CNOT4-209ENST00000473470 S100A4P26447 101 aaKnown RBP1.32□□□□□ -2.2
CNOT4-209ENST00000473470 RPS25P62851 125 aaKnown RBP1.32□□□□□ -2.2
CNOT4-209ENST00000473470 RHEBQ15382 184 aa1.32□□□□□ -2.2
CNOT4-209ENST00000473470 LINC01554Q52M75 96 aa1.32□□□□□ -2.2
CNOT4-209ENST00000473470 CYP2G1PQ6ZSU1 146 aa1.32□□□□□ -2.2
CNOT4-209ENST00000473470 LINC00305Q7Z4B0 112 aa1.32□□□□□ -2.2
CNOT4-209ENST00000473470 CANT1Q8WVQ1 401 aa1.32□□□□□ -2.2
CNOT4-209ENST00000473470 AQP10Q96PS8 301 aa1.32□□□□□ -2.2
CNOT4-209ENST00000473470 CYSLTR1Q9Y271 337 aa1.32□□□□□ -2.2
CNOT4-209ENST00000473470 C22orf24Q9Y442 160 aa1.32□□□□□ -2.2
CNOT4-209ENST00000473470 TRBV7-3A0A075B6L6 115 aa1.31□□□□□ -2.2
CNOT4-209ENST00000473470 IGHV1-58A0A0C4DH39 117 aa1.31□□□□□ -2.2
CNOT4-209ENST00000473470 IGLC2P0DOY2 106 aa1.31□□□□□ -2.2
CNOT4-209ENST00000473470 RNASE3P12724 160 aaKnown RBP1.31□□□□□ -2.2
CNOT4-209ENST00000473470 S100A10P60903 97 aa1.31□□□□□ -2.2
CNOT4-209ENST00000473470 RRAS2P62070 204 aaPredicted RBP1.31□□□□□ -2.2
CNOT4-209ENST00000473470 WHAMMP3Q1A5X7 153 aa1.31□□□□□ -2.2
CNOT4-209ENST00000473470 KHDC3LQ587J8 217 aa1.31□□□□□ -2.2
CNOT4-209ENST00000473470 SPANXN5Q5MJ07 72 aa1.31□□□□□ -2.2
CNOT4-209ENST00000473470 Q6AWC8 147 aa1.31□□□□□ -2.2
CNOT4-209ENST00000473470 SIGMAR1Q99720 223 aa1.31□□□□□ -2.2
CNOT4-209ENST00000473470 OR5AC2Q9NZP5 309 aa1.31□□□□□ -2.2
CNOT4-209ENST00000473470 TRBV25-1A0A075B6N4 114 aa1.3□□□□□ -2.2
CNOT4-209ENST00000473470 FXYD6-FXYD2A0A087WZ82 144 aa1.3□□□□□ -2.2
CNOT4-209ENST00000473470 TRBV6-1A0A0K0K1D8 114 aa1.3□□□□□ -2.2
CNOT4-209ENST00000473470 H3BVH4 76 aa1.3□□□□□ -2.2
CNOT4-209ENST00000473470 NUPR1O60356 82 aa1.3□□□□□ -2.2
CNOT4-209ENST00000473470 SPINK1P00995 79 aa1.3□□□□□ -2.2
CNOT4-209ENST00000473470 ZNF56Q15929 161 aa1.3□□□□□ -2.2
CNOT4-209ENST00000473470 Q5VV11 94 aa1.3□□□□□ -2.2
CNOT4-209ENST00000473470 C5orf38Q86SI9 138 aa1.3□□□□□ -2.2
CNOT4-209ENST00000473470 STX12Q86Y82 276 aa1.3□□□□□ -2.2
CNOT4-209ENST00000473470 DEFB107AQ8IZN7 70 aa1.3□□□□□ -2.2
CNOT4-209ENST00000473470 OSTCQ9NRP0 149 aa1.3□□□□□ -2.2
CNOT4-209ENST00000473470 TRBV20-1A0A075B6N2 111 aa1.29□□□□□ -2.2
CNOT4-209ENST00000473470 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.29□□□□□ -2.2
CNOT4-209ENST00000473470 IGHV1-24A0A0C4DH33 117 aa1.29□□□□□ -2.2
CNOT4-209ENST00000473470 EDF1O60869 148 aaKnown RBP1.29□□□□□ -2.2
CNOT4-209ENST00000473470 TCRAP04437 139 aa1.29□□□□□ -2.2
CNOT4-209ENST00000473470 MSMO1Q15800 293 aa1.29□□□□□ -2.2
CNOT4-209ENST00000473470 CCDC58Q4VC31 144 aa1.29□□□□□ -2.2
CNOT4-209ENST00000473470 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.29□□□□□ -2.2
CNOT4-209ENST00000473470 FAM19A2Q8N3H0 131 aa1.29□□□□□ -2.2
CNOT4-209ENST00000473470 PLEKHB2Q96CS7 222 aa1.29□□□□□ -2.2
CNOT4-209ENST00000473470 HYLS1Q96M11 299 aa1.29□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 135 ms