RNA–Protein interactions for RNA: ENST00000472815.5

HIF3A-206, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 1,709 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-206ENST00000472815 IGKV2D-28P01615 120 aa9.56□□□□□ -0.88
HIF3A-206ENST00000472815 OR13C6PQ8NH95 151 aa9.56□□□□□ -0.88
HIF3A-206ENST00000472815 DNAH1Q9P2D7 4330 aa9.56□□□□□ -0.88
HIF3A-206ENST00000472815 LY6G6CO95867 125 aa9.56□□□□□ -0.88
HIF3A-206ENST00000472815 LINC00337Q8N6G1 96 aa9.56□□□□□ -0.88
HIF3A-206ENST00000472815 PKIGQ9Y2B9 76 aa9.56□□□□□ -0.88
HIF3A-206ENST00000472815 M0R2N4 97 aa9.55□□□□□ -0.88
HIF3A-206ENST00000472815 CNBPP62633 177 aaKnown RBP9.55□□□□□ -0.88
HIF3A-206ENST00000472815 TRBV10-2A0A0K0K1G8 114 aa9.54□□□□□ -0.88
HIF3A-206ENST00000472815 TRIAP1O43715 76 aa9.54□□□□□ -0.88
HIF3A-206ENST00000472815 RPL18AQ02543 176 aaKnown RBP9.54□□□□□ -0.88
HIF3A-206ENST00000472815 TMEM126AQ9H061 195 aa9.54□□□□□ -0.88
HIF3A-206ENST00000472815 LOC107984640A0A0U1RRK4 108 aa9.53□□□□□ -0.88
HIF3A-206ENST00000472815 GAGE2EQ4V326 116 aa9.53□□□□□ -0.88
HIF3A-206ENST00000472815 S100A7L2Q5SY68 101 aa9.53□□□□□ -0.88
HIF3A-206ENST00000472815 Q6ZR54 194 aa9.53□□□□□ -0.88
HIF3A-206ENST00000472815 LINC00476Q8WZB0 136 aa9.53□□□□□ -0.88
HIF3A-206ENST00000472815 XAGE1AQ9HD64 81 aa9.53□□□□□ -0.88
HIF3A-206ENST00000472815 GAGE2DQ9UEU5 116 aa9.53□□□□□ -0.88
HIF3A-206ENST00000472815 SLPIP03973 132 aa9.53□□□□□ -0.88
HIF3A-206ENST00000472815 Q6ZRN7 208 aaPredicted RBP9.53□□□□□ -0.88
HIF3A-206ENST00000472815 Q6ZRP5 223 aa9.53□□□□□ -0.88
HIF3A-206ENST00000472815 RPL28P46779 137 aaKnown RBP9.52□□□□□ -0.89
HIF3A-206ENST00000472815 CBY1Q9Y3M2 126 aa9.52□□□□□ -0.89
HIF3A-206ENST00000472815 WFDC2Q14508 124 aa9.51□□□□□ -0.89
HIF3A-206ENST00000472815 ATXN8Q156A1 80 aa9.51□□□□□ -0.89
HIF3A-206ENST00000472815 NCR3O14931 201 aa9.51□□□□□ -0.89
HIF3A-206ENST00000472815 C1orf134Q5TEV5 83 aa9.51□□□□□ -0.89
HIF3A-206ENST00000472815 LRCOL1A6NCL2 159 aa9.5□□□□□ -0.89
HIF3A-206ENST00000472815 VPS13DQ5THJ4 4388 aa9.49□□□□□ -0.89
HIF3A-206ENST00000472815 H3BMG7 143 aa9.49□□□□□ -0.89
HIF3A-206ENST00000472815 TCL1BO95988 128 aa9.49□□□□□ -0.89
HIF3A-206ENST00000472815 ALMS1Q8TCU4 4167 aa9.49□□□□□ -0.89
HIF3A-206ENST00000472815 PRR3P79522 188 aaKnown RBP9.48□□□□□ -0.89
HIF3A-206ENST00000472815 SMIM11BQ8TCY0 68 aa9.48□□□□□ -0.89
HIF3A-206ENST00000472815 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.48□□□□□ -0.89
HIF3A-206ENST00000472815 H0YGX0 51 aa9.48□□□□□ -0.89
HIF3A-206ENST00000472815 M0R378 163 aa9.48□□□□□ -0.89
HIF3A-206ENST00000472815 VPREB1P12018 145 aa9.48□□□□□ -0.89
HIF3A-206ENST00000472815 GAGE2BQ13066 116 aa9.48□□□□□ -0.89
HIF3A-206ENST00000472815 NKAPP1Q8N9T2 125 aa9.48□□□□□ -0.89
HIF3A-206ENST00000472815 PLA2G2DQ9UNK4 145 aa9.48□□□□□ -0.89
HIF3A-206ENST00000472815 F8W1H4 67 aa9.46□□□□□ -0.89
HIF3A-206ENST00000472815 C9orf129Q5T035 196 aaKnown RBP9.46□□□□□ -0.89
HIF3A-206ENST00000472815 Q8N814 137 aa9.46□□□□□ -0.89
HIF3A-206ENST00000472815 IGLV6-57P01721 117 aa9.45□□□□□ -0.9
HIF3A-206ENST00000472815 Q8NDZ9 215 aa9.45□□□□□ -0.9
HIF3A-206ENST00000472815 A0A087WTM6 91 aa9.45□□□□□ -0.9
HIF3A-206ENST00000472815 LCE6AA0A183 80 aa9.45□□□□□ -0.9
HIF3A-206ENST00000472815 C16orf90A8MZG2 172 aa9.45□□□□□ -0.9
HIF3A-206ENST00000472815 LST1O00453 97 aa9.44□□□□□ -0.9
HIF3A-206ENST00000472815 SNCGO76070 127 aa9.44□□□□□ -0.9
HIF3A-206ENST00000472815 C9orf163Q8N9P6 203 aa9.44□□□□□ -0.9
HIF3A-206ENST00000472815 KMT2AQ03164 3969 aa9.43□□□□□ -0.9
HIF3A-206ENST00000472815 CLEC2BQ92478 149 aa9.42□□□□□ -0.9
HIF3A-206ENST00000472815 LINC00474Q9P2X8 69 aa9.42□□□□□ -0.9
HIF3A-206ENST00000472815 IGLV5-37A0A075B6J1 123 aa9.42□□□□□ -0.9
HIF3A-206ENST00000472815 TRAV23DV6A0A075B6W5 121 aa9.42□□□□□ -0.9
HIF3A-206ENST00000472815 TRBV10-3A0A0K0K1G6 114 aa9.42□□□□□ -0.9
HIF3A-206ENST00000472815 LINC01620Q4KN68 170 aa9.42□□□□□ -0.9
HIF3A-206ENST00000472815 DNAH6Q9C0G6 4158 aa9.41□□□□□ -0.9
HIF3A-206ENST00000472815 SACSQ9NZJ4 4579 aa9.41□□□□□ -0.9
HIF3A-206ENST00000472815 TRACP01848 142 aa9.4□□□□□ -0.9
HIF3A-206ENST00000472815 C9JAW5 83 aa9.39□□□□□ -0.91
HIF3A-206ENST00000472815 DNAL4O96015 105 aa9.39□□□□□ -0.91
HIF3A-206ENST00000472815 DIRC1Q969H9 104 aa9.39□□□□□ -0.91
HIF3A-206ENST00000472815 A0A096LNI7 61 aa9.39□□□□□ -0.91
HIF3A-206ENST00000472815 A0A1B0GX51 115 aa9.39□□□□□ -0.91
HIF3A-206ENST00000472815 C6orf99Q4VX62 202 aa9.39□□□□□ -0.91
HIF3A-206ENST00000472815 SERTAD4-AS1Q5TG53 156 aa9.39□□□□□ -0.91
HIF3A-206ENST00000472815 DNAH10Q8IVF4 4471 aa9.38□□□□□ -0.91
HIF3A-206ENST00000472815 IGKV2-24A0A0C4DH68 120 aa9.38□□□□□ -0.91
HIF3A-206ENST00000472815 KMT2CQ8NEZ4 4911 aaKnown RBP9.38□□□□□ -0.91
HIF3A-206ENST00000472815 M0QXV9 152 aa9.37□□□□□ -0.91
HIF3A-206ENST00000472815 SLC25A20O43772 301 aa9.37□□□□□ -0.91
HIF3A-206ENST00000472815 ZNF73O43830 326 aaPredicted RBP9.37□□□□□ -0.91
HIF3A-206ENST00000472815 TRBV7-6A0A0J9YX20 115 aa9.36□□□□□ -0.91
HIF3A-206ENST00000472815 FAM19A5Q7Z5A7 132 aaPredicted RBP9.36□□□□□ -0.91
HIF3A-206ENST00000472815 PRO0461Q9UI25 63 aa9.36□□□□□ -0.91
HIF3A-206ENST00000472815 H3BT86 120 aa9.36□□□□□ -0.91
HIF3A-206ENST00000472815 MRPL55Q7Z7F7 128 aaKnown RBP9.36□□□□□ -0.91
HIF3A-206ENST00000472815 C7orf33Q8WU49 177 aa9.36□□□□□ -0.91
HIF3A-206ENST00000472815 C22orf24Q9Y442 160 aa9.36□□□□□ -0.91
HIF3A-206ENST00000472815 MTURNQ8N3F0 131 aa9.35□□□□□ -0.91
HIF3A-206ENST00000472815 FAM168BA1KXE4 195 aa9.34□□□□□ -0.91
HIF3A-206ENST00000472815 RTL8CO15255 209 aa9.34□□□□□ -0.91
HIF3A-206ENST00000472815 SDIM1Q6ZPB5 146 aa9.34□□□□□ -0.91
HIF3A-206ENST00000472815 ANKRD29Q8N6D5 301 aa9.34□□□□□ -0.91
HIF3A-206ENST00000472815 KCNQ1DNQ9H478 68 aa9.34□□□□□ -0.91
HIF3A-206ENST00000472815 HYDINQ4G0P3 5121 aa9.34□□□□□ -0.91
HIF3A-206ENST00000472815 PRYO14603 147 aa9.34□□□□□ -0.92
HIF3A-206ENST00000472815 FAM218AQ96MZ4 157 aa9.34□□□□□ -0.92
HIF3A-206ENST00000472815 A0A087WYN8 130 aa9.33□□□□□ -0.92
HIF3A-206ENST00000472815 IGLV5-52A0A0A0MRZ9 124 aa9.33□□□□□ -0.92
HIF3A-206ENST00000472815 COX7BP24311 80 aa9.32□□□□□ -0.92
HIF3A-206ENST00000472815 LINC00167Q96N53 147 aa9.32□□□□□ -0.92
HIF3A-206ENST00000472815 IGLV1-50A0A075B6I6 118 aa9.31□□□□□ -0.92
HIF3A-206ENST00000472815 LINC01600Q96MT4 127 aa9.31□□□□□ -0.92
HIF3A-206ENST00000472815 ELOF1P60002 83 aaKnown RBP9.31□□□□□ -0.92
HIF3A-206ENST00000472815 LINC00575Q6W349 94 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms