RNA–Protein interactions for RNA: ENST00000472696.1

EPHA4-212, Transcript of EPH receptor A4, humanhuman

TSL 4

Gene EPHA4, Length 531 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-212ENST00000472696 J3QQQ9 107 aa3.87□□□□□ -1.79
EPHA4-212ENST00000472696 M0R2N4 97 aa3.87□□□□□ -1.79
EPHA4-212ENST00000472696 SEC61BP60468 96 aaKnown RBP3.87□□□□□ -1.79
EPHA4-212ENST00000472696 CNBPP62633 177 aaKnown RBP3.87□□□□□ -1.79
EPHA4-212ENST00000472696 COX17Q14061 63 aa3.87□□□□□ -1.79
EPHA4-212ENST00000472696 WFDC2Q14508 124 aa3.87□□□□□ -1.79
EPHA4-212ENST00000472696 C4orf26Q17RF5 130 aa3.87□□□□□ -1.79
EPHA4-212ENST00000472696 COX7B2Q8TF08 81 aa3.87□□□□□ -1.79
EPHA4-212ENST00000472696 NTN5Q8WTR8 489 aaPredicted RBP3.87□□□□□ -1.79
EPHA4-212ENST00000472696 PPDPFLQ8WWR9 84 aa3.87□□□□□ -1.79
EPHA4-212ENST00000472696 PRO0628Q9UI54 55 aa3.87□□□□□ -1.79
EPHA4-212ENST00000472696 DNAH10Q8IVF4 4471 aa3.86□□□□□ -1.79
EPHA4-212ENST00000472696 TRBV30A0A0K0K1B3 111 aa3.86□□□□□ -1.79
EPHA4-212ENST00000472696 A0A1B0GWB2 263 aa3.86□□□□□ -1.79
EPHA4-212ENST00000472696 NDUFA1O15239 70 aa3.86□□□□□ -1.79
EPHA4-212ENST00000472696 LGALS3P17931 250 aaKnown RBP3.86□□□□□ -1.79
EPHA4-212ENST00000472696 SPAG11BQ08648 103 aa3.86□□□□□ -1.79
EPHA4-212ENST00000472696 CIRBPQ14011 172 aaKnown RBP3.86□□□□□ -1.79
EPHA4-212ENST00000472696 KIAA0087Q14695 138 aa3.86□□□□□ -1.79
EPHA4-212ENST00000472696 ETDBQ3ZM63 59 aa3.86□□□□□ -1.79
EPHA4-212ENST00000472696 C15orf56Q8N910 161 aa3.86□□□□□ -1.79
EPHA4-212ENST00000472696 TENM2Q9NT68 2774 aa3.86□□□□□ -1.79
EPHA4-212ENST00000472696 A0A087WTM6 91 aa3.85□□□□□ -1.79
EPHA4-212ENST00000472696 TLX1NBP0CAT3 122 aa3.85□□□□□ -1.79
EPHA4-212ENST00000472696 IFITM1P13164 125 aa3.85□□□□□ -1.79
EPHA4-212ENST00000472696 C1orf195Q5TG92 126 aa3.85□□□□□ -1.79
EPHA4-212ENST00000472696 Q8N814 137 aa3.85□□□□□ -1.79
EPHA4-212ENST00000472696 MAPKAPK5-AS1Q8N8E1 139 aa3.85□□□□□ -1.79
EPHA4-212ENST00000472696 CAMK2N2Q96S95 79 aa3.85□□□□□ -1.79
EPHA4-212ENST00000472696 RTL8CO15255 209 aa3.84□□□□□ -1.79
EPHA4-212ENST00000472696 TIMM17BO60830 172 aa3.84□□□□□ -1.79
EPHA4-212ENST00000472696 SNCGO76070 127 aa3.84□□□□□ -1.79
EPHA4-212ENST00000472696 RPL18AQ02543 176 aaKnown RBP3.84□□□□□ -1.79
EPHA4-212ENST00000472696 SYCNQ0VAF6 134 aa3.84□□□□□ -1.79
EPHA4-212ENST00000472696 Q6ZVQ6 151 aa3.84□□□□□ -1.79
EPHA4-212ENST00000472696 CEND1Q8N111 149 aa3.84□□□□□ -1.79
EPHA4-212ENST00000472696 COPS9Q8WXC6 57 aa3.84□□□□□ -1.79
EPHA4-212ENST00000472696 ZNF625Q96I27 306 aaPredicted RBP3.84□□□□□ -1.79
EPHA4-212ENST00000472696 PPDPFQ9H3Y8 114 aa3.84□□□□□ -1.79
EPHA4-212ENST00000472696 TOMM7Q9P0U1 55 aa3.84□□□□□ -1.79
EPHA4-212ENST00000472696 NDUFA12Q9UI09 145 aa3.84□□□□□ -1.79
EPHA4-212ENST00000472696 KMT2CQ8NEZ4 4911 aaKnown RBP3.83□□□□□ -1.8
EPHA4-212ENST00000472696 TRBV20-1A0A075B6N2 111 aa3.83□□□□□ -1.8
EPHA4-212ENST00000472696 A0A0J9YXY3 114 aa3.83□□□□□ -1.8
EPHA4-212ENST00000472696 MT-ATP8P03928 68 aa3.83□□□□□ -1.8
EPHA4-212ENST00000472696 NDUFV3P56181 108 aaKnown RBP3.83□□□□□ -1.8
EPHA4-212ENST00000472696 LCE2AQ5TA79 106 aaPredicted RBP3.83□□□□□ -1.8
EPHA4-212ENST00000472696 C9orf163Q8N9P6 203 aa3.83□□□□□ -1.8
EPHA4-212ENST00000472696 CARD19Q96LW7 228 aa3.83□□□□□ -1.8
EPHA4-212ENST00000472696 LINC00474Q9P2X8 69 aa3.83□□□□□ -1.8
EPHA4-212ENST00000472696 PRO0461Q9UI25 63 aa3.83□□□□□ -1.8
EPHA4-212ENST00000472696 RYR2Q92736 4967 aa3.82□□□□□ -1.8
EPHA4-212ENST00000472696 FRAS1Q86XX4 4008 aa3.82□□□□□ -1.8
EPHA4-212ENST00000472696 IGKV2D-26A0A0A0MRZ7 120 aa3.82□□□□□ -1.8
EPHA4-212ENST00000472696 FAM240AA0A1B0GVK7 77 aa3.82□□□□□ -1.8
EPHA4-212ENST00000472696 ZNF815PA8K554 130 aa3.82□□□□□ -1.8
EPHA4-212ENST00000472696 NDUFC2-KCTD14E9PQ53 114 aa3.82□□□□□ -1.8
EPHA4-212ENST00000472696 SCGB1C2P0DMR2 95 aa3.82□□□□□ -1.8
EPHA4-212ENST00000472696 RPS28P62857 69 aaKnown RBP3.82□□□□□ -1.8
EPHA4-212ENST00000472696 HIGD2BQ4VC39 106 aa3.82□□□□□ -1.8
EPHA4-212ENST00000472696 MEIG1Q5JSS6 88 aa3.82□□□□□ -1.8
EPHA4-212ENST00000472696 SCGB1D4Q6XE38 83 aa3.82□□□□□ -1.8
EPHA4-212ENST00000472696 TEN1Q86WV5 123 aa3.82□□□□□ -1.8
EPHA4-212ENST00000472696 NAA38Q9BRA0 125 aaKnown RBP3.82□□□□□ -1.8
EPHA4-212ENST00000472696 NHP2Q9NX24 153 aaKnown RBP3.82□□□□□ -1.8
EPHA4-212ENST00000472696 FAT2Q9NYQ8 4349 aa3.81□□□□□ -1.8
EPHA4-212ENST00000472696 LOC107984156A0A0G2JMH3 177 aa3.81□□□□□ -1.8
EPHA4-212ENST00000472696 LOC107984640A0A0U1RRK4 108 aa3.81□□□□□ -1.8
EPHA4-212ENST00000472696 Q6ZRU5 148 aa3.81□□□□□ -1.8
EPHA4-212ENST00000472696 ARL17AQ8IVW1 177 aa3.81□□□□□ -1.8
EPHA4-212ENST00000472696 IGLV5-52A0A0A0MRZ9 124 aa3.8□□□□□ -1.8
EPHA4-212ENST00000472696 A0A1B0GX51 115 aa3.8□□□□□ -1.8
EPHA4-212ENST00000472696 C16orf90A8MZG2 172 aa3.8□□□□□ -1.8
EPHA4-212ENST00000472696 SLPIP03973 132 aa3.8□□□□□ -1.8
EPHA4-212ENST00000472696 FXYD2P54710 66 aa3.8□□□□□ -1.8
EPHA4-212ENST00000472696 TSPEAR-AS2P59090 65 aa3.8□□□□□ -1.8
EPHA4-212ENST00000472696 C2orf82Q6UX34 121 aa3.8□□□□□ -1.8
EPHA4-212ENST00000472696 UNQ6190/PRO20217Q6UXQ8 127 aa3.8□□□□□ -1.8
EPHA4-212ENST00000472696 PCP2Q8IVA1 136 aa3.8□□□□□ -1.8
EPHA4-212ENST00000472696 C6orf48Q9UBA6 75 aa3.8□□□□□ -1.8
EPHA4-212ENST00000472696 DNAH11Q96DT5 4516 aa3.8□□□□□ -1.8
EPHA4-212ENST00000472696 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.79□□□□□ -1.8
EPHA4-212ENST00000472696 J3KT08 172 aa3.79□□□□□ -1.8
EPHA4-212ENST00000472696 LECT2O14960 151 aa3.79□□□□□ -1.8
EPHA4-212ENST00000472696 NDUFC2O95298 119 aa3.79□□□□□ -1.8
EPHA4-212ENST00000472696 LINC00158P58513 81 aa3.79□□□□□ -1.8
EPHA4-212ENST00000472696 MRPL55Q7Z7F7 128 aaKnown RBP3.79□□□□□ -1.8
EPHA4-212ENST00000472696 HIST1H4GQ99525 98 aa3.79□□□□□ -1.8
EPHA4-212ENST00000472696 IMUPQ9GZP8 106 aa3.79□□□□□ -1.8
EPHA4-212ENST00000472696 TP73-AS1Q9UF72 201 aa3.79□□□□□ -1.8
EPHA4-212ENST00000472696 CCDC179H3BU77 68 aa3.78□□□□□ -1.8
EPHA4-212ENST00000472696 SRSF9Q13242 221 aaKnown RBP eCLIP3.78□□□□□ -1.8
EPHA4-212ENST00000472696 C10orf25Q5T742 122 aa3.78□□□□□ -1.8
EPHA4-212ENST00000472696 SDIM1Q6ZPB5 146 aa3.78□□□□□ -1.8
EPHA4-212ENST00000472696 LINC00526Q96FQ7 95 aa3.78□□□□□ -1.8
EPHA4-212ENST00000472696 LINC01600Q96MT4 127 aa3.78□□□□□ -1.8
EPHA4-212ENST00000472696 DNAH5Q8TE73 4624 aa3.77□□□□□ -1.81
EPHA4-212ENST00000472696 A0A1B0GVY2 172 aa3.77□□□□□ -1.81
EPHA4-212ENST00000472696 CDK2AP2O75956 126 aa3.77□□□□□ -1.81
EPHA4-212ENST00000472696 PFN2P35080 140 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms