RNA–Protein interactions for RNA: ENST00000472648.1

SIK3-208, Transcript of SIK family kinase 3, humanhuman

TSL 3

Gene SIK3, Length 267 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-208ENST00000472648 URB1-AS1Q96HZ7 61 aa3.29□□□□□ -1.88
SIK3-208ENST00000472648 CST9LQ9H4G1 147 aa3.29□□□□□ -1.88
SIK3-208ENST00000472648 GAGE2DQ9UEU5 116 aa3.29□□□□□ -1.88
SIK3-208ENST00000472648 C20orf202A1L168 122 aa3.28□□□□□ -1.88
SIK3-208ENST00000472648 KRTDAPP60985 99 aa3.28□□□□□ -1.88
SIK3-208ENST00000472648 SPAG11BQ08648 103 aa3.28□□□□□ -1.88
SIK3-208ENST00000472648 TMEM170BQ5T4T1 132 aa3.28□□□□□ -1.88
SIK3-208ENST00000472648 ZC2HC1BQ5TFG8 222 aa3.28□□□□□ -1.88
SIK3-208ENST00000472648 KRTAP19-1Q8IUB9 90 aa3.28□□□□□ -1.88
SIK3-208ENST00000472648 AMELXQ99217 191 aa3.28□□□□□ -1.88
SIK3-208ENST00000472648 TOMM7Q9P0U1 55 aa3.28□□□□□ -1.88
SIK3-208ENST00000472648 TMA7Q9Y2S6 64 aaKnown RBP3.28□□□□□ -1.88
SIK3-208ENST00000472648 A0A096LNJ9 63 aa3.27□□□□□ -1.89
SIK3-208ENST00000472648 TRAV12-1A0A0B4J245 112 aa3.27□□□□□ -1.89
SIK3-208ENST00000472648 TINCRA0A1B0GVN0 87 aa3.27□□□□□ -1.89
SIK3-208ENST00000472648 NDUFA1O15239 70 aa3.27□□□□□ -1.89
SIK3-208ENST00000472648 TLX1NBP0CAT3 122 aa3.27□□□□□ -1.89
SIK3-208ENST00000472648 AKR1D1P51857 326 aa3.27□□□□□ -1.89
SIK3-208ENST00000472648 CKS1BP61024 79 aa3.27□□□□□ -1.89
SIK3-208ENST00000472648 SNRPEP62304 92 aaKnown RBP3.27□□□□□ -1.89
SIK3-208ENST00000472648 C6orf226Q5I0X4 101 aa3.27□□□□□ -1.89
SIK3-208ENST00000472648 LINC00242Q5T6M2 205 aa3.27□□□□□ -1.89
SIK3-208ENST00000472648 SPAG11AQ6PDA7 123 aa3.27□□□□□ -1.89
SIK3-208ENST00000472648 COX6B2Q6YFQ2 88 aa3.27□□□□□ -1.89
SIK3-208ENST00000472648 KRTAP7-1Q8IUC3 87 aa3.27□□□□□ -1.89
SIK3-208ENST00000472648 DAND5Q8N907 189 aa3.27□□□□□ -1.89
SIK3-208ENST00000472648 ORAOV1Q8WV07 137 aa3.27□□□□□ -1.89
SIK3-208ENST00000472648 MRPL35Q9NZE8 188 aaKnown RBP3.27□□□□□ -1.89
SIK3-208ENST00000472648 IGLV8-61A0A075B6I0 122 aa3.26□□□□□ -1.89
SIK3-208ENST00000472648 F8VRH5 84 aa3.26□□□□□ -1.89
SIK3-208ENST00000472648 KRTAP4-16G5E9R7 235 aaPredicted RBP3.26□□□□□ -1.89
SIK3-208ENST00000472648 DPM2O94777 84 aa3.26□□□□□ -1.89
SIK3-208ENST00000472648 SPINK8P0C7L1 97 aa3.26□□□□□ -1.89
SIK3-208ENST00000472648 CFC1P0CG37 223 aa3.26□□□□□ -1.89
SIK3-208ENST00000472648 PLNP26678 52 aa3.26□□□□□ -1.89
SIK3-208ENST00000472648 HERVK_113P61574 105 aa3.26□□□□□ -1.89
SIK3-208ENST00000472648 COA6Q5JTJ3 125 aaKnown RBP3.26□□□□□ -1.89
SIK3-208ENST00000472648 OR10D4PQ8NGN7 298 aa3.26□□□□□ -1.89
SIK3-208ENST00000472648 NDUFA12Q9UI09 145 aa3.26□□□□□ -1.89
SIK3-208ENST00000472648 F8WDY8 70 aa3.25□□□□□ -1.89
SIK3-208ENST00000472648 SYS1-DBNDD2H3BUS1 97 aa3.25□□□□□ -1.89
SIK3-208ENST00000472648 BCE1O60756 84 aa3.25□□□□□ -1.89
SIK3-208ENST00000472648 SCGB1D1O95968 90 aa3.25□□□□□ -1.89
SIK3-208ENST00000472648 IGKCP01834 107 aa3.25□□□□□ -1.89
SIK3-208ENST00000472648 IGLC3P0DOY3 106 aa3.25□□□□□ -1.89
SIK3-208ENST00000472648 LINC00310P59036 64 aa3.25□□□□□ -1.89
SIK3-208ENST00000472648 C4orf48Q5BLP8 95 aa3.25□□□□□ -1.89
SIK3-208ENST00000472648 XP32Q5T750 250 aa3.25□□□□□ -1.89
SIK3-208ENST00000472648 PET117Q6UWS5 81 aa3.25□□□□□ -1.89
SIK3-208ENST00000472648 FAM19A3Q7Z5A8 133 aa3.25□□□□□ -1.89
SIK3-208ENST00000472648 LINC01561Q8N1V8 128 aa3.25□□□□□ -1.89
SIK3-208ENST00000472648 COX7B2Q8TF08 81 aa3.25□□□□□ -1.89
SIK3-208ENST00000472648 PMCHL2Q9BQD1 86 aa3.25□□□□□ -1.89
SIK3-208ENST00000472648 CDKN2A-AS1Q9UH64 79 aa3.25□□□□□ -1.89
SIK3-208ENST00000472648 IGHV3OR16-9A0A0B4J2B5 98 aa3.24□□□□□ -1.89
SIK3-208ENST00000472648 C11orf86A6NJI1 115 aa3.24□□□□□ -1.89
SIK3-208ENST00000472648 HSBP1L1C9JCN9 74 aa3.24□□□□□ -1.89
SIK3-208ENST00000472648 C3orf79P0CE67 100 aa3.24□□□□□ -1.89
SIK3-208ENST00000472648 LBHQ53QV2 105 aaPredicted RBP3.24□□□□□ -1.89
SIK3-208ENST00000472648 HIST3H2BBQ8N257 126 aa3.24□□□□□ -1.89
SIK3-208ENST00000472648 FAM104AQ969W3 186 aa3.24□□□□□ -1.89
SIK3-208ENST00000472648 HIST1H2BLQ99880 126 aa3.24□□□□□ -1.89
SIK3-208ENST00000472648 C6orf48Q9UBA6 75 aa3.24□□□□□ -1.89
SIK3-208ENST00000472648 IGLV5-45A0A087WSX0 123 aa3.23□□□□□ -1.89
SIK3-208ENST00000472648 C5orf52A6NGY3 159 aa3.23□□□□□ -1.89
SIK3-208ENST00000472648 ZNF22P17026 224 aaPredicted RBP3.23□□□□□ -1.89
SIK3-208ENST00000472648 LGALS3P17931 250 aaKnown RBP3.23□□□□□ -1.89
SIK3-208ENST00000472648 CXCL5P42830 114 aa3.23□□□□□ -1.89
SIK3-208ENST00000472648 UBE2AP49459 152 aa3.23□□□□□ -1.89
SIK3-208ENST00000472648 C10orf25Q5T742 122 aa3.23□□□□□ -1.89
SIK3-208ENST00000472648 SFTA2Q6UW10 78 aa3.23□□□□□ -1.89
SIK3-208ENST00000472648 UNQ6190/PRO20217Q6UXQ8 127 aa3.23□□□□□ -1.89
SIK3-208ENST00000472648 Q8IZM0 81 aa3.23□□□□□ -1.89
SIK3-208ENST00000472648 PLEKHB2Q96CS7 222 aa3.23□□□□□ -1.89
SIK3-208ENST00000472648 LINC00846Q9NV44 126 aa3.23□□□□□ -1.89
SIK3-208ENST00000472648 TRBV30A0A0K0K1B3 111 aa3.22□□□□□ -1.89
SIK3-208ENST00000472648 TMEM223A0PJW6 202 aa3.22□□□□□ -1.89
SIK3-208ENST00000472648 SMIM1B2RUZ4 78 aa3.22□□□□□ -1.89
SIK3-208ENST00000472648 NDUFC2-KCTD14E9PQ53 114 aa3.22□□□□□ -1.89
SIK3-208ENST00000472648 KRTAP6-3Q3LI67 103 aa3.22□□□□□ -1.89
SIK3-208ENST00000472648 PCOTHQ58A44 107 aa3.22□□□□□ -1.89
SIK3-208ENST00000472648 MEIG1Q5JSS6 88 aa3.22□□□□□ -1.89
SIK3-208ENST00000472648 C9orf129Q5T035 196 aaKnown RBP3.22□□□□□ -1.89
SIK3-208ENST00000472648 C3orf22Q8N5N4 141 aa3.22□□□□□ -1.89
SIK3-208ENST00000472648 C22orf24Q9Y442 160 aa3.22□□□□□ -1.89
SIK3-208ENST00000472648 MYMXA0A1B0GTQ4 84 aa3.21□□□□□ -1.9
SIK3-208ENST00000472648 LINC00587B1AMM8 73 aa3.21□□□□□ -1.9
SIK3-208ENST00000472648 LEPROTO15243 131 aa3.21□□□□□ -1.9
SIK3-208ENST00000472648 NMUP48645 174 aa3.21□□□□□ -1.9
SIK3-208ENST00000472648 KRTAP20-1Q3LI63 56 aa3.21□□□□□ -1.9
SIK3-208ENST00000472648 LINC01545Q5VT33 79 aa3.21□□□□□ -1.9
SIK3-208ENST00000472648 C2orf82Q6UX34 121 aa3.21□□□□□ -1.9
SIK3-208ENST00000472648 MRPL55Q7Z7F7 128 aaKnown RBP3.21□□□□□ -1.9
SIK3-208ENST00000472648 ATOH7Q8N100 152 aa3.21□□□□□ -1.9
SIK3-208ENST00000472648 J3QQQ9 107 aa3.2□□□□□ -1.9
SIK3-208ENST00000472648 PFN2P35080 140 aa3.2□□□□□ -1.9
SIK3-208ENST00000472648 LINC00158P58513 81 aa3.2□□□□□ -1.9
SIK3-208ENST00000472648 HERV-K104P63124 156 aa3.2□□□□□ -1.9
SIK3-208ENST00000472648 ZNF625Q96I27 306 aaPredicted RBP3.2□□□□□ -1.9
SIK3-208ENST00000472648 IGLV5-39A0A0G2JS06 123 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms