RNA–Protein interactions for RNA: ENST00000472224.1

CLRN1-205, Transcript of clarin 1, humanhuman

TSL 3

Gene CLRN1, Length 606 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1-205ENST00000472224 PMCHL2Q9BQD1 86 aa7.34□□□□□ -1.23
CLRN1-205ENST00000472224 CDIP1Q9H305 208 aa7.34□□□□□ -1.23
CLRN1-205ENST00000472224 MAP1LC3CQ9BXW4 147 aa7.33□□□□□ -1.24
CLRN1-205ENST00000472224 KRTAP9-2Q9BYQ4 174 aa7.33□□□□□ -1.24
CLRN1-205ENST00000472224 ERG28Q9UKR5 140 aa7.33□□□□□ -1.24
CLRN1-205ENST00000472224 ATP6V1G1O75348 118 aa7.32□□□□□ -1.24
CLRN1-205ENST00000472224 PLNP26678 52 aa7.32□□□□□ -1.24
CLRN1-205ENST00000472224 KRTAP11-1Q8IUC1 163 aa7.32□□□□□ -1.24
CLRN1-205ENST00000472224 DPM2O94777 84 aa7.31□□□□□ -1.24
CLRN1-205ENST00000472224 SFTA2Q6UW10 78 aa7.31□□□□□ -1.24
CLRN1-205ENST00000472224 C22orf24Q9Y442 160 aa7.31□□□□□ -1.24
CLRN1-205ENST00000472224 A0A0U1RRA0 63 aa7.3□□□□□ -1.24
CLRN1-205ENST00000472224 GAGE10A6NGK3 116 aa7.3□□□□□ -1.24
CLRN1-205ENST00000472224 IGKCP01834 107 aa7.3□□□□□ -1.24
CLRN1-205ENST00000472224 S100A1P23297 94 aa7.3□□□□□ -1.24
CLRN1-205ENST00000472224 LINC00158P58513 81 aa7.3□□□□□ -1.24
CLRN1-205ENST00000472224 HERVK_113P61574 105 aa7.3□□□□□ -1.24
CLRN1-205ENST00000472224 NKAPP1Q8N9T2 125 aa7.3□□□□□ -1.24
CLRN1-205ENST00000472224 LBHQ53QV2 105 aaPredicted RBP7.29□□□□□ -1.24
CLRN1-205ENST00000472224 MEIG1Q5JSS6 88 aa7.29□□□□□ -1.24
CLRN1-205ENST00000472224 SPINK6Q6UWN8 80 aa7.29□□□□□ -1.24
CLRN1-205ENST00000472224 MRPL55Q7Z7F7 128 aaKnown RBP7.29□□□□□ -1.24
CLRN1-205ENST00000472224 SND1-IT1Q9HBX3 110 aa7.29□□□□□ -1.24
CLRN1-205ENST00000472224 TSPEAR-AS2P59090 65 aa7.28□□□□□ -1.24
CLRN1-205ENST00000472224 COX17Q14061 63 aa7.28□□□□□ -1.24
CLRN1-205ENST00000472224 NDUFA12Q9UI09 145 aa7.28□□□□□ -1.24
CLRN1-205ENST00000472224 SYS1-DBNDD2H3BUS1 97 aa7.27□□□□□ -1.25
CLRN1-205ENST00000472224 LEPROTO15243 131 aa7.27□□□□□ -1.25
CLRN1-205ENST00000472224 IGLV7-43P04211 117 aa7.27□□□□□ -1.25
CLRN1-205ENST00000472224 REG3GQ6UW15 175 aa7.27□□□□□ -1.25
CLRN1-205ENST00000472224 PLEKHB2Q96CS7 222 aa7.27□□□□□ -1.25
CLRN1-205ENST00000472224 TP73-AS1Q9UF72 201 aa7.27□□□□□ -1.25
CLRN1-205ENST00000472224 MYMXA0A1B0GTQ4 84 aa7.26□□□□□ -1.25
CLRN1-205ENST00000472224 RPL37AP8A6NKH3 93 aa7.26□□□□□ -1.25
CLRN1-205ENST00000472224 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.26□□□□□ -1.25
CLRN1-205ENST00000472224 SMIM13P0DJ93 91 aa7.26□□□□□ -1.25
CLRN1-205ENST00000472224 LGALS3P17931 250 aaKnown RBP7.26□□□□□ -1.25
CLRN1-205ENST00000472224 HERV-K104P63124 156 aa7.26□□□□□ -1.25
CLRN1-205ENST00000472224 LINC00167Q96N53 147 aa7.26□□□□□ -1.25
CLRN1-205ENST00000472224 KRTAP9-6A0A140TA67 174 aa7.25□□□□□ -1.25
CLRN1-205ENST00000472224 KRTDAPP60985 99 aa7.25□□□□□ -1.25
CLRN1-205ENST00000472224 SRSF9Q13242 221 aaKnown RBP eCLIP7.25□□□□□ -1.25
CLRN1-205ENST00000472224 KRTAP4-12Q9BQ66 201 aa7.25□□□□□ -1.25
CLRN1-205ENST00000472224 FAT4Q6V0I7 4981 aa7.25□□□□□ -1.25
CLRN1-205ENST00000472224 IGLV5-37A0A075B6J1 123 aa7.24□□□□□ -1.25
CLRN1-205ENST00000472224 J3QQQ9 107 aa7.24□□□□□ -1.25
CLRN1-205ENST00000472224 VPREB1P12018 145 aa7.24□□□□□ -1.25
CLRN1-205ENST00000472224 RPL24P83731 157 aaKnown RBP7.24□□□□□ -1.25
CLRN1-205ENST00000472224 COA6Q5JTJ3 125 aaKnown RBP7.24□□□□□ -1.25
CLRN1-205ENST00000472224 KRTAP19-1Q8IUB9 90 aa7.24□□□□□ -1.25
CLRN1-205ENST00000472224 IGKV2-28A0A075B6P5 120 aa7.23□□□□□ -1.25
CLRN1-205ENST00000472224 IGKV2D-28P01615 120 aa7.23□□□□□ -1.25
CLRN1-205ENST00000472224 C3orf79P0CE67 100 aa7.23□□□□□ -1.25
CLRN1-205ENST00000472224 PET117Q6UWS5 81 aa7.23□□□□□ -1.25
CLRN1-205ENST00000472224 MIR7-3HGQ8N6C7 128 aa7.23□□□□□ -1.25
CLRN1-205ENST00000472224 DIRC1Q969H9 104 aa7.23□□□□□ -1.25
CLRN1-205ENST00000472224 LINC01545Q5VT33 79 aa7.22□□□□□ -1.25
CLRN1-205ENST00000472224 Q8NDZ9 215 aa7.22□□□□□ -1.25
CLRN1-205ENST00000472224 LINC00587B1AMM8 73 aa7.21□□□□□ -1.26
CLRN1-205ENST00000472224 NMUP48645 174 aa7.21□□□□□ -1.26
CLRN1-205ENST00000472224 DAND5Q8N907 189 aa7.21□□□□□ -1.26
CLRN1-205ENST00000472224 LINC01600Q96MT4 127 aa7.21□□□□□ -1.26
CLRN1-205ENST00000472224 LPAP08519 4548 aa7.21□□□□□ -1.26
CLRN1-205ENST00000472224 C20orf202A1L168 122 aa7.2□□□□□ -1.26
CLRN1-205ENST00000472224 E9PLD3 99 aa7.2□□□□□ -1.26
CLRN1-205ENST00000472224 H0Y9J4 135 aa7.2□□□□□ -1.26
CLRN1-205ENST00000472224 NCR3O14931 201 aa7.2□□□□□ -1.26
CLRN1-205ENST00000472224 BCE1O60756 84 aa7.2□□□□□ -1.26
CLRN1-205ENST00000472224 BOD1L2Q8IYS8 172 aa7.2□□□□□ -1.26
CLRN1-205ENST00000472224 MUC2Q02817 5179 aa7.19□□□□□ -1.26
CLRN1-205ENST00000472224 UBE2AP49459 152 aa7.19□□□□□ -1.26
CLRN1-205ENST00000472224 C21orf62-AS1Q17RA5 79 aa7.19□□□□□ -1.26
CLRN1-205ENST00000472224 TMEM238C9JI98 176 aa7.18□□□□□ -1.26
CLRN1-205ENST00000472224 ZNF861PO60384 105 aa7.18□□□□□ -1.26
CLRN1-205ENST00000472224 S100A2P29034 98 aa7.18□□□□□ -1.26
CLRN1-205ENST00000472224 RPL28P46779 137 aaKnown RBP7.18□□□□□ -1.26
CLRN1-205ENST00000472224 MIEN1Q9BRT3 115 aa7.18□□□□□ -1.26
CLRN1-205ENST00000472224 S100A6P06703 90 aa7.17□□□□□ -1.26
CLRN1-205ENST00000472224 NPC2P61916 151 aa7.17□□□□□ -1.26
CLRN1-205ENST00000472224 ATOH7Q8N100 152 aa7.17□□□□□ -1.26
CLRN1-205ENST00000472224 IGLV1-50A0A075B6I6 118 aa7.16□□□□□ -1.26
CLRN1-205ENST00000472224 A0A0J9YXY3 114 aa7.16□□□□□ -1.26
CLRN1-205ENST00000472224 M0R378 163 aa7.16□□□□□ -1.26
CLRN1-205ENST00000472224 FAM19A1Q7Z5A9 133 aa7.16□□□□□ -1.26
CLRN1-205ENST00000472224 HIST3H2BBQ8N257 126 aa7.16□□□□□ -1.26
CLRN1-205ENST00000472224 IGKV2D-26A0A0A0MRZ7 120 aa7.15□□□□□ -1.26
CLRN1-205ENST00000472224 ZNF815PA8K554 130 aa7.15□□□□□ -1.26
CLRN1-205ENST00000472224 PRLHP81277 87 aa7.15□□□□□ -1.26
CLRN1-205ENST00000472224 TMEM126AQ9H061 195 aa7.15□□□□□ -1.26
CLRN1-205ENST00000472224 PRR26Q8N8Z3 221 aa7.14□□□□□ -1.27
CLRN1-205ENST00000472224 HIST1H2BLQ99880 126 aa7.14□□□□□ -1.27
CLRN1-205ENST00000472224 TTTY13Q9BZ97 58 aa7.14□□□□□ -1.27
CLRN1-205ENST00000472224 KRTAP1-4P0C5Y4 121 aa7.12□□□□□ -1.27
CLRN1-205ENST00000472224 KRTAP10-8P60410 259 aa7.12□□□□□ -1.27
CLRN1-205ENST00000472224 ADAMTSL4-AS1Q5T5F5 129 aa7.12□□□□□ -1.27
CLRN1-205ENST00000472224 TRBV10-3A0A0K0K1G6 114 aa7.11□□□□□ -1.27
CLRN1-205ENST00000472224 PRYO14603 147 aa7.11□□□□□ -1.27
CLRN1-205ENST00000472224 SOSTDC1Q6X4U4 206 aa7.11□□□□□ -1.27
CLRN1-205ENST00000472224 KRTAP13-1Q8IUC0 172 aa7.11□□□□□ -1.27
CLRN1-205ENST00000472224 SPANXB1Q9NS25 103 aaPredicted RBP7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms