RNA–Protein interactions for RNA: ENST00000471667.5

LRCH3-213, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 4

Gene LRCH3, Length 586 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-213ENST00000471667 RPL39LQ96EH5 51 aaKnown RBP1.62□□□□□ -2.15
LRCH3-213ENST00000471667 OBSCN-AS1Q96MR7 158 aa1.62□□□□□ -2.15
LRCH3-213ENST00000471667 FAM236AA0A1B0GUQ0 79 aa1.61□□□□□ -2.15
LRCH3-213ENST00000471667 FAM236BA0A1B0GV22 79 aa1.61□□□□□ -2.15
LRCH3-213ENST00000471667 ANKRD20A5PA0PJZ0 165 aa1.61□□□□□ -2.15
LRCH3-213ENST00000471667 IGSF23A1L1A6 192 aa1.61□□□□□ -2.15
LRCH3-213ENST00000471667 TCAPO15273 167 aa1.61□□□□□ -2.15
LRCH3-213ENST00000471667 HMGB3O15347 200 aaKnown RBP1.61□□□□□ -2.15
LRCH3-213ENST00000471667 SCO1O75880 301 aa1.61□□□□□ -2.15
LRCH3-213ENST00000471667 LTAP01374 205 aa1.61□□□□□ -2.15
LRCH3-213ENST00000471667 S100A9P06702 114 aaKnown RBP1.61□□□□□ -2.15
LRCH3-213ENST00000471667 GCHFRP30047 84 aa1.61□□□□□ -2.15
LRCH3-213ENST00000471667 AKR1C3P42330 323 aa1.61□□□□□ -2.15
LRCH3-213ENST00000471667 RAB5BP61020 215 aa1.61□□□□□ -2.15
LRCH3-213ENST00000471667 Q1RN00 199 aa1.61□□□□□ -2.15
LRCH3-213ENST00000471667 C1orf195Q5TG92 126 aa1.61□□□□□ -2.15
LRCH3-213ENST00000471667 SMIM4Q8WVI0 70 aa1.61□□□□□ -2.15
LRCH3-213ENST00000471667 TCEAL7Q9BRU2 100 aa1.61□□□□□ -2.15
LRCH3-213ENST00000471667 C2orf88Q9BSF0 95 aa1.61□□□□□ -2.15
LRCH3-213ENST00000471667 PRO2289Q9P1D8 64 aa1.61□□□□□ -2.15
LRCH3-213ENST00000471667 AHNAKQ09666 5890 aaKnown RBP1.61□□□□□ -2.15
LRCH3-213ENST00000471667 TRBV6-5A0A0K0K1A5 114 aa1.6□□□□□ -2.15
LRCH3-213ENST00000471667 C9orf170A2RU37 121 aa1.6□□□□□ -2.15
LRCH3-213ENST00000471667 ERC2-IT1O76042 136 aa1.6□□□□□ -2.15
LRCH3-213ENST00000471667 PPP1R17O96001 155 aa1.6□□□□□ -2.15
LRCH3-213ENST00000471667 STAG3L2P0CL84 134 aa1.6□□□□□ -2.15
LRCH3-213ENST00000471667 STAG3L3P0CL85 134 aa1.6□□□□□ -2.15
LRCH3-213ENST00000471667 RBM3P98179 157 aaKnown RBP1.6□□□□□ -2.15
LRCH3-213ENST00000471667 Q5XG85 94 aa1.6□□□□□ -2.15
LRCH3-213ENST00000471667 Q96NJ1 140 aa1.6□□□□□ -2.15
LRCH3-213ENST00000471667 SPANXA1Q9NS26 97 aa1.6□□□□□ -2.15
LRCH3-213ENST00000471667 MED9Q9NWA0 146 aa1.6□□□□□ -2.15
LRCH3-213ENST00000471667 LAMTOR3Q9UHA4 124 aa1.6□□□□□ -2.15
LRCH3-213ENST00000471667 TRBV27A0A0K0K1C4 114 aa1.59□□□□□ -2.15
LRCH3-213ENST00000471667 A8MWL6 223 aa1.59□□□□□ -2.15
LRCH3-213ENST00000471667 RGS5O15539 181 aa1.59□□□□□ -2.15
LRCH3-213ENST00000471667 ATP5LO75964 103 aa1.59□□□□□ -2.15
LRCH3-213ENST00000471667 MBP02144 154 aa1.59□□□□□ -2.15
LRCH3-213ENST00000471667 MT1BP07438 61 aa1.59□□□□□ -2.15
LRCH3-213ENST00000471667 HRES1P13985 223 aa1.59□□□□□ -2.15
LRCH3-213ENST00000471667 IFI27P40305 119 aaPredicted RBP1.59□□□□□ -2.15
LRCH3-213ENST00000471667 DEFA1P59665 94 aa1.59□□□□□ -2.15
LRCH3-213ENST00000471667 RAB14P61106 215 aa1.59□□□□□ -2.15
LRCH3-213ENST00000471667 JOSD1Q15040 202 aaPredicted RBP1.59□□□□□ -2.15
LRCH3-213ENST00000471667 ZNF625Q96I27 306 aaPredicted RBP1.59□□□□□ -2.15
LRCH3-213ENST00000471667 PRO1933Q9H354 126 aa1.59□□□□□ -2.15
LRCH3-213ENST00000471667 LSM3P62310 102 aaKnown RBP1.58□□□□□ -2.16
LRCH3-213ENST00000471667 SEC11AP67812 179 aa1.58□□□□□ -2.16
LRCH3-213ENST00000471667 MRPS36P82909 103 aaKnown RBP1.58□□□□□ -2.16
LRCH3-213ENST00000471667 IGFL1Q6UW32 110 aa1.58□□□□□ -2.16
LRCH3-213ENST00000471667 TEX43Q6ZNM6 134 aa1.58□□□□□ -2.16
LRCH3-213ENST00000471667 BAGE2Q86Y30 109 aa1.58□□□□□ -2.16
LRCH3-213ENST00000471667 TOMM5Q8N4H5 51 aa1.58□□□□□ -2.16
LRCH3-213ENST00000471667 ACTR3CQ9C0K3 210 aaPredicted RBP1.58□□□□□ -2.16
LRCH3-213ENST00000471667 RNASE7Q9H1E1 156 aaKnown RBP1.58□□□□□ -2.16
LRCH3-213ENST00000471667 BORCS7-ASMTA0A0B4J1R7 106 aa1.57□□□□□ -2.16
LRCH3-213ENST00000471667 PPP1R2P9O14990 202 aa1.57□□□□□ -2.16
LRCH3-213ENST00000471667 IGLC6P0CF74 106 aa1.57□□□□□ -2.16
LRCH3-213ENST00000471667 TMEM136Q6ZRR5 245 aa1.57□□□□□ -2.16
LRCH3-213ENST00000471667 BORCS7Q96B45 105 aa1.57□□□□□ -2.16
LRCH3-213ENST00000471667 TMEM191AQ9H0A3 160 aa1.57□□□□□ -2.16
LRCH3-213ENST00000471667 VCX3BQ9H321 246 aa1.57□□□□□ -2.16
LRCH3-213ENST00000471667 VCX3AQ9NNX9 186 aa1.57□□□□□ -2.16
LRCH3-213ENST00000471667 MUC19Q7Z5P9 8384 aa1.57□□□□□ -2.16
LRCH3-213ENST00000471667 INMT-MINDY4F8WBC2 141 aa1.56□□□□□ -2.16
LRCH3-213ENST00000471667 NDUFB6O95139 128 aa1.56□□□□□ -2.16
LRCH3-213ENST00000471667 PFN2P35080 140 aa1.56□□□□□ -2.16
LRCH3-213ENST00000471667 AKR1D1P51857 326 aa1.56□□□□□ -2.16
LRCH3-213ENST00000471667 POLR2KP53803 58 aaKnown RBP1.56□□□□□ -2.16
LRCH3-213ENST00000471667 KRTAP19-8Q3LI54 63 aa1.56□□□□□ -2.16
LRCH3-213ENST00000471667 ALKAL2Q6UX46 152 aa1.56□□□□□ -2.16
LRCH3-213ENST00000471667 CNBD2Q96M20 576 aa1.56□□□□□ -2.16
LRCH3-213ENST00000471667 BIN3Q9NQY0 253 aa1.56□□□□□ -2.16
LRCH3-213ENST00000471667 A0A1W2PNM2 257 aa1.55□□□□□ -2.16
LRCH3-213ENST00000471667 A4D1N5 150 aa1.55□□□□□ -2.16
LRCH3-213ENST00000471667 FAM74A7A6NL05 159 aa1.55□□□□□ -2.16
LRCH3-213ENST00000471667 PFDN1O60925 122 aa1.55□□□□□ -2.16
LRCH3-213ENST00000471667 NDUFA6P56556 154 aa1.55□□□□□ -2.16
LRCH3-213ENST00000471667 HERVK_113P63121 156 aa1.55□□□□□ -2.16
LRCH3-213ENST00000471667 NEDD8Q15843 81 aa1.55□□□□□ -2.16
LRCH3-213ENST00000471667 C9orf62Q8N4C0 152 aa1.55□□□□□ -2.16
LRCH3-213ENST00000471667 COX7B2Q8TF08 81 aa1.55□□□□□ -2.16
LRCH3-213ENST00000471667 TMEM141Q96I45 108 aa1.55□□□□□ -2.16
LRCH3-213ENST00000471667 Q9BRP9 147 aa1.55□□□□□ -2.16
LRCH3-213ENST00000471667 KCNQ1DNQ9H478 68 aa1.55□□□□□ -2.16
LRCH3-213ENST00000471667 DHRS4-AS1Q9P1J3 65 aa1.55□□□□□ -2.16
LRCH3-213ENST00000471667 TNFSF18Q9UNG2 199 aa1.55□□□□□ -2.16
LRCH3-213ENST00000471667 TRBV20OR9-2A0A075B6H5 130 aa1.54□□□□□ -2.16
LRCH3-213ENST00000471667 A8MUU9 505 aa1.54□□□□□ -2.16
LRCH3-213ENST00000471667 PET100P0DJ07 73 aa1.54□□□□□ -2.16
LRCH3-213ENST00000471667 RAB5AP20339 215 aa1.54□□□□□ -2.16
LRCH3-213ENST00000471667 SPRR1AP35321 89 aa1.54□□□□□ -2.16
LRCH3-213ENST00000471667 RPL35P42766 123 aaKnown RBP1.54□□□□□ -2.16
LRCH3-213ENST00000471667 HINT1P49773 126 aaPredicted RBP1.54□□□□□ -2.16
LRCH3-213ENST00000471667 COX17Q14061 63 aa1.54□□□□□ -2.16
LRCH3-213ENST00000471667 CNPY1Q3B7I2 92 aa1.54□□□□□ -2.16
LRCH3-213ENST00000471667 SND1-IT1Q9HBX3 110 aa1.54□□□□□ -2.16
LRCH3-213ENST00000471667 NAP1L6A6NFF2 107 aa1.53□□□□□ -2.16
LRCH3-213ENST00000471667 CCDC160A6NGH7 325 aa1.53□□□□□ -2.16
LRCH3-213ENST00000471667 ATP6V1G1O75348 118 aa1.53□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms