RNA–Protein interactions for RNA: ENST00000471459.1

HOXB3-206, Transcript of homeobox B3, humanhuman

TSL 4

Gene HOXB3, Length 565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-206ENST00000471459 A0A0U1RRA0 63 aa8.9□□□□□ -0.98
HOXB3-206ENST00000471459 SLC7A5P1Q8MH63 180 aa8.9□□□□□ -0.98
HOXB3-206ENST00000471459 MAP1LC3CQ9BXW4 147 aa8.9□□□□□ -0.98
HOXB3-206ENST00000471459 MYMXA0A1B0GTQ4 84 aa8.89□□□□□ -0.99
HOXB3-206ENST00000471459 SCO1O75880 301 aa8.89□□□□□ -0.99
HOXB3-206ENST00000471459 SERF1AO75920 110 aa8.89□□□□□ -0.99
HOXB3-206ENST00000471459 FAM19A1Q7Z5A9 133 aa8.89□□□□□ -0.99
HOXB3-206ENST00000471459 TNXBP22105 4242 aa8.89□□□□□ -0.99
HOXB3-206ENST00000471459 PLNP26678 52 aa8.88□□□□□ -0.99
HOXB3-206ENST00000471459 TYMSOSQ8TAI1 123 aa8.88□□□□□ -0.99
HOXB3-206ENST00000471459 TMEM126AQ9H061 195 aa8.88□□□□□ -0.99
HOXB3-206ENST00000471459 M0R378 163 aa8.87□□□□□ -0.99
HOXB3-206ENST00000471459 SMIM13P0DJ93 91 aa8.87□□□□□ -0.99
HOXB3-206ENST00000471459 NDUFA12Q9UI09 145 aa8.87□□□□□ -0.99
HOXB3-206ENST00000471459 FABP4P15090 132 aa8.86□□□□□ -0.99
HOXB3-206ENST00000471459 HERVK_113P61574 105 aa8.86□□□□□ -0.99
HOXB3-206ENST00000471459 PLEKHB2Q96CS7 222 aa8.86□□□□□ -0.99
HOXB3-206ENST00000471459 TMEM238C9JI98 176 aa8.85□□□□□ -0.99
HOXB3-206ENST00000471459 DPM2O94777 84 aa8.85□□□□□ -0.99
HOXB3-206ENST00000471459 S100A12P80511 92 aa8.85□□□□□ -0.99
HOXB3-206ENST00000471459 KRTAP13-1Q8IUC0 172 aa8.85□□□□□ -0.99
HOXB3-206ENST00000471459 BOD1L2Q8IYS8 172 aa8.85□□□□□ -0.99
HOXB3-206ENST00000471459 COLCA2A8K830 154 aa8.84□□□□□ -0.99
HOXB3-206ENST00000471459 LEPROTO15243 131 aa8.84□□□□□ -0.99
HOXB3-206ENST00000471459 PRLHP81277 87 aa8.84□□□□□ -0.99
HOXB3-206ENST00000471459 PRR4Q16378 134 aa8.84□□□□□ -0.99
HOXB3-206ENST00000471459 MIR7-3HGQ8N6C7 128 aa8.84□□□□□ -0.99
HOXB3-206ENST00000471459 UBR4Q5T4S7 5183 aa8.84□□□□□ -1
HOXB3-206ENST00000471459 IGKV2D-26A0A0A0MRZ7 120 aa8.83□□□□□ -1
HOXB3-206ENST00000471459 FAM229BQ4G0N7 80 aa8.83□□□□□ -1
HOXB3-206ENST00000471459 A0A087X002 238 aa8.82□□□□□ -1
HOXB3-206ENST00000471459 TSPAN13O95857 204 aa8.82□□□□□ -1
HOXB3-206ENST00000471459 ANAPC11Q9NYG5 84 aa8.82□□□□□ -1
HOXB3-206ENST00000471459 IGKCP01834 107 aa8.81□□□□□ -1
HOXB3-206ENST00000471459 LGALS3P17931 250 aaKnown RBP8.81□□□□□ -1
HOXB3-206ENST00000471459 NMUP48645 174 aa8.81□□□□□ -1
HOXB3-206ENST00000471459 HIGD2AQ9BW72 106 aa8.81□□□□□ -1
HOXB3-206ENST00000471459 J3QQQ9 107 aa8.8□□□□□ -1
HOXB3-206ENST00000471459 LINC00310P59036 64 aa8.8□□□□□ -1
HOXB3-206ENST00000471459 Q8NDZ9 215 aa8.8□□□□□ -1
HOXB3-206ENST00000471459 MIEN1Q9BRT3 115 aa8.8□□□□□ -1
HOXB3-206ENST00000471459 PRYO14603 147 aa8.79□□□□□ -1
HOXB3-206ENST00000471459 NCR3O14931 201 aa8.78□□□□□ -1
HOXB3-206ENST00000471459 PMCHL2Q9BQD1 86 aa8.78□□□□□ -1
HOXB3-206ENST00000471459 ZNF706Q9Y5V0 76 aaPredicted RBP8.78□□□□□ -1
HOXB3-206ENST00000471459 ETDCA0A1B0GVM5 59 aa8.77□□□□□ -1.01
HOXB3-206ENST00000471459 KCNQ1DNQ9H478 68 aa8.76□□□□□ -1.01
HOXB3-206ENST00000471459 TSPEAR-AS2P59090 65 aa8.75□□□□□ -1.01
HOXB3-206ENST00000471459 LINC00337Q8N6G1 96 aa8.75□□□□□ -1.01
HOXB3-206ENST00000471459 LINC00304Q8N9R0 145 aa8.75□□□□□ -1.01
HOXB3-206ENST00000471459 LRP2P98164 4655 aa8.75□□□□□ -1.01
HOXB3-206ENST00000471459 LOC107984156A0A0G2JMH3 177 aa8.74□□□□□ -1.01
HOXB3-206ENST00000471459 TRBV10-3A0A0K0K1G6 114 aa8.74□□□□□ -1.01
HOXB3-206ENST00000471459 KRTAP13-2Q52LG2 175 aa8.74□□□□□ -1.01
HOXB3-206ENST00000471459 ARL17AQ8IVW1 177 aa8.74□□□□□ -1.01
HOXB3-206ENST00000471459 DAND5Q8N907 189 aa8.74□□□□□ -1.01
HOXB3-206ENST00000471459 TRBV10-2A0A0K0K1G8 114 aa8.73□□□□□ -1.01
HOXB3-206ENST00000471459 CTAG1AP78358 180 aa8.73□□□□□ -1.01
HOXB3-206ENST00000471459 E9PLD3 99 aa8.72□□□□□ -1.01
HOXB3-206ENST00000471459 SYS1-DBNDD2H3BUS1 97 aa8.72□□□□□ -1.01
HOXB3-206ENST00000471459 HIST1H2BKO60814 126 aa8.72□□□□□ -1.01
HOXB3-206ENST00000471459 HIST1H2BJP06899 126 aa8.72□□□□□ -1.01
HOXB3-206ENST00000471459 HIST1H2BOP23527 126 aa8.72□□□□□ -1.01
HOXB3-206ENST00000471459 DDTP30046 118 aa8.72□□□□□ -1.01
HOXB3-206ENST00000471459 HIST1H2BBP33778 126 aa8.72□□□□□ -1.01
HOXB3-206ENST00000471459 HIST1H2BDP58876 126 aa8.72□□□□□ -1.01
HOXB3-206ENST00000471459 HIST1H2BCP62807 126 aa8.72□□□□□ -1.01
HOXB3-206ENST00000471459 HIST2H2BEQ16778 126 aa8.72□□□□□ -1.01
HOXB3-206ENST00000471459 C4orf48Q5BLP8 95 aa8.72□□□□□ -1.01
HOXB3-206ENST00000471459 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.72□□□□□ -1.01
HOXB3-206ENST00000471459 S100A7L2Q5SY68 101 aa8.72□□□□□ -1.01
HOXB3-206ENST00000471459 HIST1H2BHQ93079 126 aa8.72□□□□□ -1.01
HOXB3-206ENST00000471459 HIST1H2BNQ99877 126 aa8.72□□□□□ -1.01
HOXB3-206ENST00000471459 HIST1H2BMQ99879 126 aa8.72□□□□□ -1.01
HOXB3-206ENST00000471459 SPANXB1Q9NS25 103 aaPredicted RBP8.72□□□□□ -1.01
HOXB3-206ENST00000471459 SPRR1AP35321 89 aa8.71□□□□□ -1.02
HOXB3-206ENST00000471459 SMCR5Q8TEV8 140 aa8.71□□□□□ -1.02
HOXB3-206ENST00000471459 SPRR4Q96PI1 79 aa8.71□□□□□ -1.02
HOXB3-206ENST00000471459 NDUFC2O95298 119 aa8.7□□□□□ -1.02
HOXB3-206ENST00000471459 SPAG11AQ6PDA7 123 aa8.7□□□□□ -1.02
HOXB3-206ENST00000471459 PET117Q6UWS5 81 aa8.7□□□□□ -1.02
HOXB3-206ENST00000471459 CBY1Q9Y3M2 126 aa8.7□□□□□ -1.02
HOXB3-206ENST00000471459 A0A0J9YXY3 114 aa8.69□□□□□ -1.02
HOXB3-206ENST00000471459 HINT1P49773 126 aaPredicted RBP8.67□□□□□ -1.02
HOXB3-206ENST00000471459 JOSD1Q15040 202 aaPredicted RBP8.67□□□□□ -1.02
HOXB3-206ENST00000471459 B5MCH6 92 aa8.66□□□□□ -1.02
HOXB3-206ENST00000471459 KRTAP4-16G5E9R7 235 aaPredicted RBP8.66□□□□□ -1.02
HOXB3-206ENST00000471459 NPC2P61916 151 aa8.66□□□□□ -1.02
HOXB3-206ENST00000471459 LINC01545Q5VT33 79 aa8.66□□□□□ -1.02
HOXB3-206ENST00000471459 C3orf22Q8N5N4 141 aa8.66□□□□□ -1.02
HOXB3-206ENST00000471459 PPDPFQ9H3Y8 114 aa8.65□□□□□ -1.02
HOXB3-206ENST00000471459 TRAV23DV6A0A075B6W5 121 aa8.64□□□□□ -1.03
HOXB3-206ENST00000471459 C20orf202A1L168 122 aa8.64□□□□□ -1.03
HOXB3-206ENST00000471459 IGLV6-57P01721 117 aa8.64□□□□□ -1.03
HOXB3-206ENST00000471459 ADAMTSL4-AS1Q5T5F5 129 aa8.64□□□□□ -1.03
HOXB3-206ENST00000471459 GAGE2AQ6NT46 116 aa8.64□□□□□ -1.03
HOXB3-206ENST00000471459 TIMM17BO60830 172 aa8.63□□□□□ -1.03
HOXB3-206ENST00000471459 KRTDAPP60985 99 aa8.63□□□□□ -1.03
HOXB3-206ENST00000471459 RETNLBQ9BQ08 111 aa8.63□□□□□ -1.03
HOXB3-206ENST00000471459 ZNF815PA8K554 130 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 118.8 ms