RNA–Protein interactions for RNA: ENST00000471445.5

SREBF1-210, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 936 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-210ENST00000471445 LINC00310P59036 64 aa12.38□□□□□ -0.43
SREBF1-210ENST00000471445 TMEM126AQ9H061 195 aa12.38□□□□□ -0.43
SREBF1-210ENST00000471445 TMEM238C9JI98 176 aa12.36□□□□□ -0.43
SREBF1-210ENST00000471445 CRYGAP11844 174 aa12.36□□□□□ -0.43
SREBF1-210ENST00000471445 LINC00158P58513 81 aa12.36□□□□□ -0.43
SREBF1-210ENST00000471445 PRLHP81277 87 aa12.36□□□□□ -0.43
SREBF1-210ENST00000471445 M0R378 163 aa12.35□□□□□ -0.43
SREBF1-210ENST00000471445 SERF1AO75920 110 aa12.34□□□□□ -0.43
SREBF1-210ENST00000471445 FAM19A1Q7Z5A9 133 aa12.34□□□□□ -0.43
SREBF1-210ENST00000471445 A0A0U1RRA0 63 aa12.33□□□□□ -0.44
SREBF1-210ENST00000471445 LEPROTL1O95214 131 aa12.33□□□□□ -0.44
SREBF1-210ENST00000471445 TYMSOSQ8TAI1 123 aa12.33□□□□□ -0.44
SREBF1-210ENST00000471445 SMIM13P0DJ93 91 aa12.32□□□□□ -0.44
SREBF1-210ENST00000471445 HERV-K104P63124 156 aa12.32□□□□□ -0.44
SREBF1-210ENST00000471445 FAM229BQ4G0N7 80 aa12.32□□□□□ -0.44
SREBF1-210ENST00000471445 ANAPC11Q9NYG5 84 aa12.32□□□□□ -0.44
SREBF1-210ENST00000471445 H0Y8G0 127 aa12.31□□□□□ -0.44
SREBF1-210ENST00000471445 KRTAP13-2Q52LG2 175 aa12.31□□□□□ -0.44
SREBF1-210ENST00000471445 MEIG1Q5JSS6 88 aa12.31□□□□□ -0.44
SREBF1-210ENST00000471445 SLC7A5P1Q8MH63 180 aa12.31□□□□□ -0.44
SREBF1-210ENST00000471445 NDUFA12Q9UI09 145 aa12.3□□□□□ -0.44
SREBF1-210ENST00000471445 MIR7-3HGQ8N6C7 128 aa12.29□□□□□ -0.44
SREBF1-210ENST00000471445 TSPEAR-AS2P59090 65 aa12.28□□□□□ -0.44
SREBF1-210ENST00000471445 MYMXA0A1B0GTQ4 84 aa12.27□□□□□ -0.45
SREBF1-210ENST00000471445 COLCA2A8K830 154 aa12.27□□□□□ -0.45
SREBF1-210ENST00000471445 PRR4Q16378 134 aa12.27□□□□□ -0.45
SREBF1-210ENST00000471445 LINC00587B1AMM8 73 aa12.26□□□□□ -0.45
SREBF1-210ENST00000471445 ATP6V1G1O75348 118 aa12.26□□□□□ -0.45
SREBF1-210ENST00000471445 TSPAN13O95857 204 aa12.26□□□□□ -0.45
SREBF1-210ENST00000471445 PLNP26678 52 aa12.26□□□□□ -0.45
SREBF1-210ENST00000471445 BOD1L2Q8IYS8 172 aa12.26□□□□□ -0.45
SREBF1-210ENST00000471445 HSPB8Q9UJY1 196 aa12.26□□□□□ -0.45
SREBF1-210ENST00000471445 LEPROTO15243 131 aa12.24□□□□□ -0.45
SREBF1-210ENST00000471445 IGKV2D-26A0A0A0MRZ7 120 aa12.23□□□□□ -0.45
SREBF1-210ENST00000471445 PRYO14603 147 aa12.23□□□□□ -0.45
SREBF1-210ENST00000471445 NCR3O14931 201 aa12.23□□□□□ -0.45
SREBF1-210ENST00000471445 PLEKHB2Q96CS7 222 aa12.23□□□□□ -0.45
SREBF1-210ENST00000471445 MAP1LC3CQ9BXW4 147 aa12.23□□□□□ -0.45
SREBF1-210ENST00000471445 DPM2O94777 84 aa12.22□□□□□ -0.45
SREBF1-210ENST00000471445 FABP4P15090 132 aa12.22□□□□□ -0.45
SREBF1-210ENST00000471445 HIGD2AQ9BW72 106 aa12.22□□□□□ -0.45
SREBF1-210ENST00000471445 SPRR1AP35321 89 aa12.21□□□□□ -0.45
SREBF1-210ENST00000471445 PMCHL2Q9BQD1 86 aa12.21□□□□□ -0.45
SREBF1-210ENST00000471445 J3QQQ9 107 aa12.2□□□□□ -0.46
SREBF1-210ENST00000471445 HERVK_113P61574 105 aa12.2□□□□□ -0.46
SREBF1-210ENST00000471445 LINC00304Q8N9R0 145 aa12.2□□□□□ -0.46
SREBF1-210ENST00000471445 KCNQ1DNQ9H478 68 aa12.2□□□□□ -0.46
SREBF1-210ENST00000471445 LOC107984156A0A0G2JMH3 177 aa12.19□□□□□ -0.46
SREBF1-210ENST00000471445 IGKCP01834 107 aa12.19□□□□□ -0.46
SREBF1-210ENST00000471445 ARL17AQ8IVW1 177 aa12.19□□□□□ -0.46
SREBF1-210ENST00000471445 LINC00337Q8N6G1 96 aa12.19□□□□□ -0.46
SREBF1-210ENST00000471445 NMUP48645 174 aa12.18□□□□□ -0.46
SREBF1-210ENST00000471445 TRBV10-3A0A0K0K1G6 114 aa12.17□□□□□ -0.46
SREBF1-210ENST00000471445 KRTAP4-16G5E9R7 235 aaPredicted RBP12.17□□□□□ -0.46
SREBF1-210ENST00000471445 DAND5Q8N907 189 aa12.17□□□□□ -0.46
SREBF1-210ENST00000471445 SPRR4Q96PI1 79 aa12.17□□□□□ -0.46
SREBF1-210ENST00000471445 LGALS3P17931 250 aaKnown RBP12.15□□□□□ -0.46
SREBF1-210ENST00000471445 C3orf22Q8N5N4 141 aa12.15□□□□□ -0.46
SREBF1-210ENST00000471445 ZNF706Q9Y5V0 76 aaPredicted RBP12.14□□□□□ -0.47
SREBF1-210ENST00000471445 TRBV10-2A0A0K0K1G8 114 aa12.13□□□□□ -0.47
SREBF1-210ENST00000471445 CTAG1AP78358 180 aa12.13□□□□□ -0.47
SREBF1-210ENST00000471445 ETDCA0A1B0GVM5 59 aa12.12□□□□□ -0.47
SREBF1-210ENST00000471445 HIST1H2BKO60814 126 aa12.12□□□□□ -0.47
SREBF1-210ENST00000471445 HIST1H2BJP06899 126 aa12.12□□□□□ -0.47
SREBF1-210ENST00000471445 HIST1H2BOP23527 126 aa12.12□□□□□ -0.47
SREBF1-210ENST00000471445 HIST1H2BBP33778 126 aa12.12□□□□□ -0.47
SREBF1-210ENST00000471445 HIST1H2BDP58876 126 aa12.12□□□□□ -0.47
SREBF1-210ENST00000471445 HIST1H2BCP62807 126 aa12.12□□□□□ -0.47
SREBF1-210ENST00000471445 HIST2H2BEQ16778 126 aa12.12□□□□□ -0.47
SREBF1-210ENST00000471445 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.12□□□□□ -0.47
SREBF1-210ENST00000471445 HIST1H2BHQ93079 126 aa12.12□□□□□ -0.47
SREBF1-210ENST00000471445 HIST1H2BNQ99877 126 aa12.12□□□□□ -0.47
SREBF1-210ENST00000471445 HIST1H2BMQ99879 126 aa12.12□□□□□ -0.47
SREBF1-210ENST00000471445 SPANXB1Q9NS25 103 aaPredicted RBP12.11□□□□□ -0.47
SREBF1-210ENST00000471445 E9PLD3 99 aa12.1□□□□□ -0.47
SREBF1-210ENST00000471445 SMCR5Q8TEV8 140 aa12.1□□□□□ -0.47
SREBF1-210ENST00000471445 RETNLBQ9BQ08 111 aa12.1□□□□□ -0.47
SREBF1-210ENST00000471445 MIEN1Q9BRT3 115 aa12.1□□□□□ -0.47
SREBF1-210ENST00000471445 DDTP30046 118 aa12.09□□□□□ -0.47
SREBF1-210ENST00000471445 S100A12P80511 92 aa12.09□□□□□ -0.47
SREBF1-210ENST00000471445 SYS1-DBNDD2H3BUS1 97 aa12.08□□□□□ -0.48
SREBF1-210ENST00000471445 NDUFC2O95298 119 aa12.08□□□□□ -0.48
SREBF1-210ENST00000471445 A0A0J9YXY3 114 aa12.07□□□□□ -0.48
SREBF1-210ENST00000471445 B5MCH6 92 aa12.07□□□□□ -0.48
SREBF1-210ENST00000471445 SOSTDC1Q6X4U4 206 aa12.07□□□□□ -0.48
SREBF1-210ENST00000471445 LINC00483Q53H64 154 aa12.05□□□□□ -0.48
SREBF1-210ENST00000471445 LINC01545Q5VT33 79 aa12.05□□□□□ -0.48
SREBF1-210ENST00000471445 IGLV6-57P01721 117 aa12.04□□□□□ -0.48
SREBF1-210ENST00000471445 SPAG11AQ6PDA7 123 aa12.04□□□□□ -0.48
SREBF1-210ENST00000471445 EIF4EBP3O60516 100 aaPredicted RBP12.03□□□□□ -0.48
SREBF1-210ENST00000471445 ADAMTSL4-AS1Q5T5F5 129 aa12.03□□□□□ -0.48
SREBF1-210ENST00000471445 Q6ZRX8 168 aa12.03□□□□□ -0.48
SREBF1-210ENST00000471445 NPC2P61916 151 aa12.02□□□□□ -0.49
SREBF1-210ENST00000471445 PPDPFQ9H3Y8 114 aa12.02□□□□□ -0.49
SREBF1-210ENST00000471445 ERC2-IT1O76042 136 aa12.01□□□□□ -0.49
SREBF1-210ENST00000471445 S100A7L2Q5SY68 101 aa12.01□□□□□ -0.49
SREBF1-210ENST00000471445 PET117Q6UWS5 81 aa12.01□□□□□ -0.49
SREBF1-210ENST00000471445 Q9BRP9 147 aa12.01□□□□□ -0.49
SREBF1-210ENST00000471445 TRAV23DV6A0A075B6W5 121 aa12□□□□□ -0.49
SREBF1-210ENST00000471445 TPRXLQ17RH7 258 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms