RNA–Protein interactions for RNA: ENST00000471357.1

LINC00880-201, long intergenic non-protein coding RNA 880, humanhuman

TSL 1 (best) BASIC

Gene LINC00880, Length 2,018 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00880-201ENST00000471357 TRAV13-2A0A0B4J235 113 aa7.78□□□□□ -1.16
LINC00880-201ENST00000471357 A0A1W2PPM0 123 aa7.78□□□□□ -1.16
LINC00880-201ENST00000471357 H7C2G1 150 aa7.78□□□□□ -1.16
LINC00880-201ENST00000471357 TLX1NBP0CAT3 122 aa7.78□□□□□ -1.16
LINC00880-201ENST00000471357 C1orf134Q5TEV5 83 aa7.78□□□□□ -1.16
LINC00880-201ENST00000471357 Q6ZRP5 223 aa7.78□□□□□ -1.16
LINC00880-201ENST00000471357 XAGE1AQ9HD64 81 aa7.78□□□□□ -1.16
LINC00880-201ENST00000471357 RPL13AP40429 203 aaKnown RBP7.77□□□□□ -1.17
LINC00880-201ENST00000471357 CNBPP62633 177 aaKnown RBP7.77□□□□□ -1.17
LINC00880-201ENST00000471357 Q1RN00 199 aa7.77□□□□□ -1.17
LINC00880-201ENST00000471357 GAGE2EQ4V326 116 aa7.77□□□□□ -1.17
LINC00880-201ENST00000471357 GAGE2DQ9UEU5 116 aa7.77□□□□□ -1.17
LINC00880-201ENST00000471357 VAMP3Q15836 100 aa7.76□□□□□ -1.17
LINC00880-201ENST00000471357 LINC00337Q8N6G1 96 aa7.76□□□□□ -1.17
LINC00880-201ENST00000471357 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.76□□□□□ -1.17
LINC00880-201ENST00000471357 FABP2P12104 132 aa7.76□□□□□ -1.17
LINC00880-201ENST00000471357 DNAH2Q9P225 4427 aa7.75□□□□□ -1.17
LINC00880-201ENST00000471357 PRR3P79522 188 aaKnown RBP7.75□□□□□ -1.17
LINC00880-201ENST00000471357 RPL18AQ02543 176 aaKnown RBP7.75□□□□□ -1.17
LINC00880-201ENST00000471357 Q8NDZ9 215 aa7.75□□□□□ -1.17
LINC00880-201ENST00000471357 LOC107984640A0A0U1RRK4 108 aa7.74□□□□□ -1.17
LINC00880-201ENST00000471357 PSMB2P49721 201 aa7.74□□□□□ -1.17
LINC00880-201ENST00000471357 A0A087WTM6 91 aa7.74□□□□□ -1.17
LINC00880-201ENST00000471357 Q8N814 137 aa7.74□□□□□ -1.17
LINC00880-201ENST00000471357 OR13C6PQ8NH95 151 aa7.73□□□□□ -1.17
LINC00880-201ENST00000471357 NCR3O14931 201 aa7.73□□□□□ -1.17
LINC00880-201ENST00000471357 C9orf129Q5T035 196 aaKnown RBP7.73□□□□□ -1.17
LINC00880-201ENST00000471357 SCGB1C2P0DMR2 95 aa7.72□□□□□ -1.17
LINC00880-201ENST00000471357 GAGE2BQ13066 116 aa7.72□□□□□ -1.17
LINC00880-201ENST00000471357 SPCS1Q9Y6A9 102 aa7.72□□□□□ -1.17
LINC00880-201ENST00000471357 HYDINQ4G0P3 5121 aa7.71□□□□□ -1.17
LINC00880-201ENST00000471357 TRBV10-2A0A0K0K1G8 114 aa7.71□□□□□ -1.17
LINC00880-201ENST00000471357 GAGE10A6NGK3 116 aa7.71□□□□□ -1.17
LINC00880-201ENST00000471357 VPREB1P12018 145 aa7.71□□□□□ -1.17
LINC00880-201ENST00000471357 LYRM7Q5U5X0 104 aa7.71□□□□□ -1.17
LINC00880-201ENST00000471357 TRIAP1O43715 76 aa7.71□□□□□ -1.18
LINC00880-201ENST00000471357 C9orf163Q8N9P6 203 aa7.71□□□□□ -1.18
LINC00880-201ENST00000471357 TMEM126AQ9H061 195 aa7.71□□□□□ -1.18
LINC00880-201ENST00000471357 K7EP34 96 aa7.7□□□□□ -1.18
LINC00880-201ENST00000471357 COX6CP09669 75 aa7.7□□□□□ -1.18
LINC00880-201ENST00000471357 GTF2H5Q6ZYL4 71 aa7.7□□□□□ -1.18
LINC00880-201ENST00000471357 DNAH17Q9UFH2 4485 aa7.7□□□□□ -1.18
LINC00880-201ENST00000471357 UBE2V1Q13404 147 aa7.69□□□□□ -1.18
LINC00880-201ENST00000471357 S100A7L2Q5SY68 101 aa7.69□□□□□ -1.18
LINC00880-201ENST00000471357 RPL28P46779 137 aaKnown RBP7.69□□□□□ -1.18
LINC00880-201ENST00000471357 SMIM11BQ8TCY0 68 aa7.69□□□□□ -1.18
LINC00880-201ENST00000471357 PLA2G2DQ9UNK4 145 aa7.69□□□□□ -1.18
LINC00880-201ENST00000471357 C16orf90A8MZG2 172 aa7.68□□□□□ -1.18
LINC00880-201ENST00000471357 PKIGQ9Y2B9 76 aa7.68□□□□□ -1.18
LINC00880-201ENST00000471357 M0R378 163 aa7.68□□□□□ -1.18
LINC00880-201ENST00000471357 SERTAD4-AS1Q5TG53 156 aa7.68□□□□□ -1.18
LINC00880-201ENST00000471357 TRBV20-1A0A075B6N2 111 aa7.67□□□□□ -1.18
LINC00880-201ENST00000471357 A0A096LNI7 61 aa7.67□□□□□ -1.18
LINC00880-201ENST00000471357 IGLV6-57P01721 117 aa7.67□□□□□ -1.18
LINC00880-201ENST00000471357 IGKV2-24A0A0C4DH68 120 aa7.66□□□□□ -1.18
LINC00880-201ENST00000471357 RTL8CO15255 209 aa7.66□□□□□ -1.18
LINC00880-201ENST00000471357 TCL1BO95988 128 aa7.66□□□□□ -1.18
LINC00880-201ENST00000471357 TNP2Q05952 138 aa7.66□□□□□ -1.18
LINC00880-201ENST00000471357 NKAPP1Q8N9T2 125 aa7.66□□□□□ -1.18
LINC00880-201ENST00000471357 SACSQ9NZJ4 4579 aa7.66□□□□□ -1.18
LINC00880-201ENST00000471357 LCE6AA0A183 80 aa7.66□□□□□ -1.18
LINC00880-201ENST00000471357 FAM168BA1KXE4 195 aa7.66□□□□□ -1.18
LINC00880-201ENST00000471357 LINC01620Q4KN68 170 aa7.66□□□□□ -1.18
LINC00880-201ENST00000471357 SDIM1Q6ZPB5 146 aa7.66□□□□□ -1.18
LINC00880-201ENST00000471357 IGLV5-37A0A075B6J1 123 aa7.65□□□□□ -1.18
LINC00880-201ENST00000471357 TRBV10-3A0A0K0K1G6 114 aa7.65□□□□□ -1.18
LINC00880-201ENST00000471357 H3BMG7 143 aa7.64□□□□□ -1.19
LINC00880-201ENST00000471357 FRAS1Q86XX4 4008 aa7.63□□□□□ -1.19
LINC00880-201ENST00000471357 ATXN8Q156A1 80 aa7.63□□□□□ -1.19
LINC00880-201ENST00000471357 FAM19A5Q7Z5A7 132 aaPredicted RBP7.63□□□□□ -1.19
LINC00880-201ENST00000471357 KRTAP7-1Q8IUC3 87 aa7.63□□□□□ -1.19
LINC00880-201ENST00000471357 CLEC2BQ92478 149 aa7.63□□□□□ -1.19
LINC00880-201ENST00000471357 H0YGX0 51 aa7.62□□□□□ -1.19
LINC00880-201ENST00000471357 FUSP35637 526 aaKnown RBP eCLIP7.62□□□□□ -1.19
LINC00880-201ENST00000471357 C7orf33Q8WU49 177 aa7.62□□□□□ -1.19
LINC00880-201ENST00000471357 C22orf24Q9Y442 160 aa7.62□□□□□ -1.19
LINC00880-201ENST00000471357 TRAV23DV6A0A075B6W5 121 aa7.62□□□□□ -1.19
LINC00880-201ENST00000471357 IGLV5-52A0A0A0MRZ9 124 aa7.62□□□□□ -1.19
LINC00880-201ENST00000471357 CHTF8P0CG12 524 aa7.62□□□□□ -1.19
LINC00880-201ENST00000471357 LINC00474Q9P2X8 69 aa7.62□□□□□ -1.19
LINC00880-201ENST00000471357 CBY1Q9Y3M2 126 aa7.62□□□□□ -1.19
LINC00880-201ENST00000471357 A0A1W2PNN7 141 aa7.61□□□□□ -1.19
LINC00880-201ENST00000471357 LST1O00453 97 aa7.61□□□□□ -1.19
LINC00880-201ENST00000471357 C6orf99Q4VX62 202 aa7.61□□□□□ -1.19
LINC00880-201ENST00000471357 HECTD4Q9Y4D8 3996 aa7.61□□□□□ -1.19
LINC00880-201ENST00000471357 MRPL55Q7Z7F7 128 aaKnown RBP7.61□□□□□ -1.19
LINC00880-201ENST00000471357 LINC00167Q96N53 147 aa7.6□□□□□ -1.19
LINC00880-201ENST00000471357 ZNF73O43830 326 aaPredicted RBP7.59□□□□□ -1.19
LINC00880-201ENST00000471357 FAM218AQ96MZ4 157 aa7.59□□□□□ -1.19
LINC00880-201ENST00000471357 M0QXV9 152 aa7.59□□□□□ -1.19
LINC00880-201ENST00000471357 DIRC1Q969H9 104 aa7.59□□□□□ -1.19
LINC00880-201ENST00000471357 KCNQ1DNQ9H478 68 aa7.59□□□□□ -1.19
LINC00880-201ENST00000471357 FAT2Q9NYQ8 4349 aa7.58□□□□□ -1.2
LINC00880-201ENST00000471357 IGLV1-50A0A075B6I6 118 aa7.58□□□□□ -1.2
LINC00880-201ENST00000471357 DPH3Q96FX2 82 aa7.58□□□□□ -1.2
LINC00880-201ENST00000471357 DNAH11Q96DT5 4516 aa7.58□□□□□ -1.2
LINC00880-201ENST00000471357 RPL37AP8A6NKH3 93 aa7.57□□□□□ -1.2
LINC00880-201ENST00000471357 F8W1H4 67 aa7.57□□□□□ -1.2
LINC00880-201ENST00000471357 PANO1I0J062 215 aa7.57□□□□□ -1.2
LINC00880-201ENST00000471357 A0A087WYN8 130 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms