RNA–Protein interactions for RNA: ENST00000471309.1

VPS52-216, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 505 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-216ENST00000471309 H7C2G1 150 aa6.13□□□□□ -1.43
VPS52-216ENST00000471309 LECT2O14960 151 aa6.13□□□□□ -1.43
VPS52-216ENST00000471309 TLX1NBP0CAT3 122 aa6.13□□□□□ -1.43
VPS52-216ENST00000471309 WFDC2Q14508 124 aa6.13□□□□□ -1.43
VPS52-216ENST00000471309 C14orf177Q52M58 125 aa6.13□□□□□ -1.43
VPS52-216ENST00000471309 Q6ZR54 194 aa6.13□□□□□ -1.43
VPS52-216ENST00000471309 Q6ZRN7 208 aaPredicted RBP6.13□□□□□ -1.43
VPS52-216ENST00000471309 LINC00337Q8N6G1 96 aa6.13□□□□□ -1.43
VPS52-216ENST00000471309 KMT2CQ8NEZ4 4911 aaKnown RBP6.13□□□□□ -1.43
VPS52-216ENST00000471309 DNAH7Q8WXX0 4024 aa6.13□□□□□ -1.43
VPS52-216ENST00000471309 GAGE10A6NGK3 116 aa6.12□□□□□ -1.43
VPS52-216ENST00000471309 SLPIP03973 132 aa6.12□□□□□ -1.43
VPS52-216ENST00000471309 PSMB2P49721 201 aa6.12□□□□□ -1.43
VPS52-216ENST00000471309 LINC00476Q8WZB0 136 aa6.12□□□□□ -1.43
VPS52-216ENST00000471309 TRIAP1O43715 76 aa6.11□□□□□ -1.43
VPS52-216ENST00000471309 CNBPP62633 177 aaKnown RBP6.11□□□□□ -1.43
VPS52-216ENST00000471309 TRBV20-1A0A075B6N2 111 aa6.1□□□□□ -1.43
VPS52-216ENST00000471309 TRBV10-2A0A0K0K1G8 114 aa6.1□□□□□ -1.43
VPS52-216ENST00000471309 LRCOL1A6NCL2 159 aa6.1□□□□□ -1.43
VPS52-216ENST00000471309 COX6CP09669 75 aa6.1□□□□□ -1.43
VPS52-216ENST00000471309 Q6ZRP5 223 aa6.1□□□□□ -1.43
VPS52-216ENST00000471309 Q8NDZ9 215 aa6.1□□□□□ -1.43
VPS52-216ENST00000471309 XAGE1AQ9HD64 81 aa6.1□□□□□ -1.43
VPS52-216ENST00000471309 RYR3Q15413 4870 aa6.1□□□□□ -1.43
VPS52-216ENST00000471309 M0R2N4 97 aa6.09□□□□□ -1.43
VPS52-216ENST00000471309 LY6G6CO95867 125 aa6.09□□□□□ -1.43
VPS52-216ENST00000471309 RPL28P46779 137 aaKnown RBP6.09□□□□□ -1.43
VPS52-216ENST00000471309 VPS13DQ5THJ4 4388 aa6.09□□□□□ -1.44
VPS52-216ENST00000471309 LOC107984640A0A0U1RRK4 108 aa6.08□□□□□ -1.44
VPS52-216ENST00000471309 NCR3O14931 201 aa6.08□□□□□ -1.44
VPS52-216ENST00000471309 TCL1BO95988 128 aa6.08□□□□□ -1.44
VPS52-216ENST00000471309 SCGB1C2P0DMR2 95 aa6.08□□□□□ -1.44
VPS52-216ENST00000471309 VPREB1P12018 145 aa6.08□□□□□ -1.44
VPS52-216ENST00000471309 RPL18AQ02543 176 aaKnown RBP6.08□□□□□ -1.44
VPS52-216ENST00000471309 GAGE2EQ4V326 116 aa6.08□□□□□ -1.44
VPS52-216ENST00000471309 C9orf129Q5T035 196 aaKnown RBP6.08□□□□□ -1.44
VPS52-216ENST00000471309 OR13C6PQ8NH95 151 aa6.08□□□□□ -1.44
VPS52-216ENST00000471309 TMEM126AQ9H061 195 aa6.08□□□□□ -1.44
VPS52-216ENST00000471309 GAGE2DQ9UEU5 116 aa6.08□□□□□ -1.44
VPS52-216ENST00000471309 GHRHP01286 108 aa6.07□□□□□ -1.44
VPS52-216ENST00000471309 PRR3P79522 188 aaKnown RBP6.07□□□□□ -1.44
VPS52-216ENST00000471309 SMIM11BQ8TCY0 68 aa6.07□□□□□ -1.44
VPS52-216ENST00000471309 PLA2G2DQ9UNK4 145 aa6.07□□□□□ -1.44
VPS52-216ENST00000471309 PKIGQ9Y2B9 76 aa6.07□□□□□ -1.44
VPS52-216ENST00000471309 H3BMG7 143 aa6.06□□□□□ -1.44
VPS52-216ENST00000471309 IGLV6-57P01721 117 aa6.06□□□□□ -1.44
VPS52-216ENST00000471309 ATXN8Q156A1 80 aa6.06□□□□□ -1.44
VPS52-216ENST00000471309 S100A7L2Q5SY68 101 aa6.06□□□□□ -1.44
VPS52-216ENST00000471309 Q8N814 137 aa6.06□□□□□ -1.44
VPS52-216ENST00000471309 LYSTQ99698 3801 aa6.06□□□□□ -1.44
VPS52-216ENST00000471309 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.05□□□□□ -1.44
VPS52-216ENST00000471309 M0R378 163 aa6.05□□□□□ -1.44
VPS52-216ENST00000471309 LST1O00453 97 aa6.05□□□□□ -1.44
VPS52-216ENST00000471309 C1orf134Q5TEV5 83 aa6.05□□□□□ -1.44
VPS52-216ENST00000471309 IGLV5-37A0A075B6J1 123 aa6.04□□□□□ -1.44
VPS52-216ENST00000471309 A0A087WTM6 91 aa6.04□□□□□ -1.44
VPS52-216ENST00000471309 GAGE2BQ13066 116 aa6.04□□□□□ -1.44
VPS52-216ENST00000471309 CLEC2BQ92478 149 aa6.04□□□□□ -1.44
VPS52-216ENST00000471309 TRBV10-3A0A0K0K1G6 114 aa6.03□□□□□ -1.44
VPS52-216ENST00000471309 C16orf90A8MZG2 172 aa6.03□□□□□ -1.44
VPS52-216ENST00000471309 F8W1H4 67 aa6.03□□□□□ -1.44
VPS52-216ENST00000471309 H0YGX0 51 aa6.03□□□□□ -1.44
VPS52-216ENST00000471309 SERTAD4-AS1Q5TG53 156 aa6.03□□□□□ -1.44
VPS52-216ENST00000471309 C9orf163Q8N9P6 203 aa6.03□□□□□ -1.44
VPS52-216ENST00000471309 PRO0461Q9UI25 63 aa6.03□□□□□ -1.44
VPS52-216ENST00000471309 CBY1Q9Y3M2 126 aa6.03□□□□□ -1.44
VPS52-216ENST00000471309 ALMS1Q8TCU4 4167 aa6.03□□□□□ -1.44
VPS52-216ENST00000471309 TENM2Q9NT68 2774 aa6.02□□□□□ -1.45
VPS52-216ENST00000471309 TRAV23DV6A0A075B6W5 121 aa6.02□□□□□ -1.45
VPS52-216ENST00000471309 A0A096LNI7 61 aa6.02□□□□□ -1.45
VPS52-216ENST00000471309 LINC01620Q4KN68 170 aa6.02□□□□□ -1.45
VPS52-216ENST00000471309 NKAPP1Q8N9T2 125 aa6.02□□□□□ -1.45
VPS52-216ENST00000471309 TRACP01848 142 aa6.01□□□□□ -1.45
VPS52-216ENST00000471309 LCE2CQ5TA81 110 aa6.01□□□□□ -1.45
VPS52-216ENST00000471309 FAM218AQ96MZ4 157 aa6.01□□□□□ -1.45
VPS52-216ENST00000471309 DNAH10Q8IVF4 4471 aa6.01□□□□□ -1.45
VPS52-216ENST00000471309 FAM168BA1KXE4 195 aa6□□□□□ -1.45
VPS52-216ENST00000471309 C9JAW5 83 aa6□□□□□ -1.45
VPS52-216ENST00000471309 M0QXV9 152 aa6□□□□□ -1.45
VPS52-216ENST00000471309 C6orf99Q4VX62 202 aa6□□□□□ -1.45
VPS52-216ENST00000471309 KRTAP7-1Q8IUC3 87 aa6□□□□□ -1.45
VPS52-216ENST00000471309 C7orf33Q8WU49 177 aa6□□□□□ -1.45
VPS52-216ENST00000471309 LINC01600Q96MT4 127 aa6□□□□□ -1.45
VPS52-216ENST00000471309 A0A1B0GX51 115 aa5.99□□□□□ -1.45
VPS52-216ENST00000471309 ZNF73O43830 326 aaPredicted RBP5.99□□□□□ -1.45
VPS52-216ENST00000471309 SDIM1Q6ZPB5 146 aa5.99□□□□□ -1.45
VPS52-216ENST00000471309 FAM19A5Q7Z5A7 132 aaPredicted RBP5.99□□□□□ -1.45
VPS52-216ENST00000471309 MTURNQ8N3F0 131 aa5.99□□□□□ -1.45
VPS52-216ENST00000471309 DIRC1Q969H9 104 aa5.99□□□□□ -1.45
VPS52-216ENST00000471309 LINC00474Q9P2X8 69 aa5.99□□□□□ -1.45
VPS52-216ENST00000471309 A0A087WYN8 130 aa5.98□□□□□ -1.45
VPS52-216ENST00000471309 IGKV2-24A0A0C4DH68 120 aa5.98□□□□□ -1.45
VPS52-216ENST00000471309 TRBV7-6A0A0J9YX20 115 aa5.98□□□□□ -1.45
VPS52-216ENST00000471309 H3BT86 120 aa5.98□□□□□ -1.45
VPS52-216ENST00000471309 RTL8CO15255 209 aa5.98□□□□□ -1.45
VPS52-216ENST00000471309 SLC25A20O43772 301 aa5.98□□□□□ -1.45
VPS52-216ENST00000471309 MRPL55Q7Z7F7 128 aaKnown RBP5.98□□□□□ -1.45
VPS52-216ENST00000471309 C22orf24Q9Y442 160 aa5.98□□□□□ -1.45
VPS52-216ENST00000471309 IGLV1-50A0A075B6I6 118 aa5.97□□□□□ -1.45
VPS52-216ENST00000471309 PRYO14603 147 aa5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 113.7 ms