RNA–Protein interactions for RNA: ENST00000470621.1

SSB-209, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 3

Gene SSB, Length 440 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-209ENST00000470621 PLGLAQ15195 96 aa0.26□□□□□ -2.37
SSB-209ENST00000470621 RRBP1Q9P2E9 1410 aaKnown RBP0.26□□□□□ -2.37
SSB-209ENST00000470621 NKTRP30414 1462 aaKnown RBP0.26□□□□□ -2.37
SSB-209ENST00000470621 PPRC1Q5VV67 1664 aaKnown RBP0.26□□□□□ -2.37
SSB-209ENST00000470621 LRRC37AA6NMS7 1700 aa0.25□□□□□ -2.37
SSB-209ENST00000470621 POLR1AO95602 1720 aaPredicted RBP0.25□□□□□ -2.37
SSB-209ENST00000470621 QSER1Q2KHR3 1735 aa0.25□□□□□ -2.37
SSB-209ENST00000470621 DOT1LQ8TEK3 1739 aa0.25□□□□□ -2.37
SSB-209ENST00000470621 ABCA8O94911 1581 aa0.25□□□□□ -2.37
SSB-209ENST00000470621 CFAP74Q9C0B2 1584 aa0.25□□□□□ -2.37
SSB-209ENST00000470621 FXYD6-FXYD2A0A087WZ82 144 aa0.25□□□□□ -2.37
SSB-209ENST00000470621 S100A3P33764 101 aa0.25□□□□□ -2.37
SSB-209ENST00000470621 SMIM11AP58511 58 aa0.25□□□□□ -2.37
SSB-209ENST00000470621 PIGYQ3MUY2 71 aa0.25□□□□□ -2.37
SSB-209ENST00000470621 SPINK6Q6UWN8 80 aa0.25□□□□□ -2.37
SSB-209ENST00000470621 S100A13Q99584 98 aa0.25□□□□□ -2.37
SSB-209ENST00000470621 PTPRZ1P23471 2315 aaPredicted RBP0.25□□□□□ -2.37
SSB-209ENST00000470621 KMT2DO14686 5537 aa0.24□□□□□ -2.37
SSB-209ENST00000470621 TSC2P49815 1807 aa0.24□□□□□ -2.37
SSB-209ENST00000470621 ZNF292O60281 2723 aa0.24□□□□□ -2.37
SSB-209ENST00000470621 PIK3C2BO00750 1634 aa0.24□□□□□ -2.37
SSB-209ENST00000470621 SETBP1Q9Y6X0 1596 aa0.24□□□□□ -2.37
SSB-209ENST00000470621 NCOA2Q15596 1464 aa0.24□□□□□ -2.37
SSB-209ENST00000470621 LRRC9Q6ZRR7 1453 aa0.24□□□□□ -2.37
SSB-209ENST00000470621 CEBPZOSA8MTT3 80 aa0.24□□□□□ -2.37
SSB-209ENST00000470621 SPRR1BP22528 89 aa0.24□□□□□ -2.37
SSB-209ENST00000470621 ADIRFQ15847 76 aa0.24□□□□□ -2.37
SSB-209ENST00000470621 DEFB121Q5J5C9 76 aa0.24□□□□□ -2.37
SSB-209ENST00000470621 LELP1Q5T871 98 aa0.24□□□□□ -2.37
SSB-209ENST00000470621 Q5VSD8 79 aa0.24□□□□□ -2.37
SSB-209ENST00000470621 PIEZO2Q9H5I5 2752 aa0.24□□□□□ -2.37
SSB-209ENST00000470621 KIF20BQ96Q89 1820 aa0.24□□□□□ -2.37
SSB-209ENST00000470621 GVINP1Q7Z2Y8 2422 aa0.24□□□□□ -2.37
SSB-209ENST00000470621 SPTBN1Q01082 2364 aaKnown RBP0.24□□□□□ -2.37
SSB-209ENST00000470621 IQGAP3Q86VI3 1631 aa0.24□□□□□ -2.37
SSB-209ENST00000470621 CHD9Q3L8U1 2897 aa0.24□□□□□ -2.37
SSB-209ENST00000470621 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP0.23□□□□□ -2.373e-6■□□□□ 10.1
SSB-209ENST00000470621 TRAV21A0A0B4J279 112 aa0.23□□□□□ -2.37
SSB-209ENST00000470621 A0A1B0GUT8 65 aa0.23□□□□□ -2.37
SSB-209ENST00000470621 ACYP1P07311 99 aa0.23□□□□□ -2.37
SSB-209ENST00000470621 PTPRQQ9UMZ3 2332 aa0.22□□□□□ -2.37
SSB-209ENST00000470621 CD163L1Q9NR16 1453 aa0.22□□□□□ -2.37
SSB-209ENST00000470621 SCN11AQ9UI33 1791 aa0.22□□□□□ -2.37
SSB-209ENST00000470621 TNXBP22105 4242 aa0.22□□□□□ -2.37
SSB-209ENST00000470621 KANTRA0A1W2PQU2 76 aa0.22□□□□□ -2.37
SSB-209ENST00000470621 COX6B1P14854 86 aa0.22□□□□□ -2.37
SSB-209ENST00000470621 KLK9Q2XQG4 91 aa0.22□□□□□ -2.37
SSB-209ENST00000470621 CCDC88BA6NC98 1476 aa0.22□□□□□ -2.37
SSB-209ENST00000470621 MYO5CQ9NQX4 1742 aa0.21□□□□□ -2.38
SSB-209ENST00000470621 FAT2Q9NYQ8 4349 aa0.21□□□□□ -2.38
SSB-209ENST00000470621 BSNQ9UPA5 3926 aa0.21□□□□□ -2.38
SSB-209ENST00000470621 DNMBPQ6XZF7 1577 aa0.21□□□□□ -2.38
SSB-209ENST00000470621 IFI6P09912 130 aa0.21□□□□□ -2.38
SSB-209ENST00000470621 HMGA1P17096 107 aaKnown RBP0.21□□□□□ -2.38
SSB-209ENST00000470621 COX7BP24311 80 aa0.21□□□□□ -2.38
SSB-209ENST00000470621 Q5BKY6 102 aa0.21□□□□□ -2.38
SSB-209ENST00000470621 C18orf32Q8TCD1 76 aa0.21□□□□□ -2.38
SSB-209ENST00000470621 MAGI3Q5TCQ9 1506 aa0.21□□□□□ -2.38
SSB-209ENST00000470621 AKAP6Q13023 2319 aa0.21□□□□□ -2.38
SSB-209ENST00000470621 ARFGEF2Q9Y6D5 1785 aa0.21□□□□□ -2.38
SSB-209ENST00000470621 PTPN23Q9H3S7 1636 aa0.2□□□□□ -2.38
SSB-209ENST00000470621 RGPD8O14715 1765 aaPredicted RBP0.2□□□□□ -2.38
SSB-209ENST00000470621 RGPD5Q99666 1765 aa0.2□□□□□ -2.38
SSB-209ENST00000470621 NAV2Q8IVL1 2488 aa0.2□□□□□ -2.38
SSB-209ENST00000470621 ABCC1P33527 1531 aa0.2□□□□□ -2.38
SSB-209ENST00000470621 URB2Q14146 1524 aaKnown RBP0.2□□□□□ -2.38
SSB-209ENST00000470621 CPSF4LA6NMK7 179 aaKnown RBP0.2□□□□□ -2.38
SSB-209ENST00000470621 H1FX-AS1Q4G0G2 97 aa0.2□□□□□ -2.38
SSB-209ENST00000470621 GAFA1Q96PS6 74 aa0.2□□□□□ -2.38
SSB-209ENST00000470621 MRPL34Q9BQ48 92 aaKnown RBP0.2□□□□□ -2.38
SSB-209ENST00000470621 PREX1Q8TCU6 1659 aa0.2□□□□□ -2.38
SSB-209ENST00000470621 COL14A1Q05707 1796 aaKnown RBP0.19□□□□□ -2.38
SSB-209ENST00000470621 IGF2RP11717 2491 aa0.19□□□□□ -2.38
SSB-209ENST00000470621 LCE6AA0A183 80 aa0.19□□□□□ -2.38
SSB-209ENST00000470621 CFDP00746 253 aaPredicted RBP0.19□□□□□ -2.38
SSB-209ENST00000470621 DEFB109BQ30KR1 87 aa0.19□□□□□ -2.38
SSB-209ENST00000470621 DEFB105AQ8NG35 78 aa0.19□□□□□ -2.38
SSB-209ENST00000470621 NCOR1O75376 2440 aa0.19□□□□□ -2.38
SSB-209ENST00000470621 ANKARQ7Z5J8 1434 aa0.19□□□□□ -2.38
SSB-209ENST00000470621 OTOGQ6ZRI0 2925 aa0.19□□□□□ -2.38
SSB-209ENST00000470621 CHD6Q8TD26 2715 aa0.19□□□□□ -2.38
SSB-209ENST00000470621 ZFYVE26Q68DK2 2539 aa0.19□□□□□ -2.38
SSB-209ENST00000470621 BCORQ6W2J9 1755 aa0.19□□□□□ -2.38
SSB-209ENST00000470621 VWFP04275 2813 aa0.19□□□□□ -2.38
SSB-209ENST00000470621 PKDREJQ9NTG1 2253 aa0.18□□□□□ -2.38
SSB-209ENST00000470621 UBR3Q6ZT12 1888 aa0.18□□□□□ -2.38
SSB-209ENST00000470621 CELSR1Q9NYQ6 3014 aa0.18□□□□□ -2.38
SSB-209ENST00000470621 SPTY2D1-AS1A0A0U1RR47 76 aa0.18□□□□□ -2.38
SSB-209ENST00000470621 SMIM13P0DJ93 91 aa0.18□□□□□ -2.38
SSB-209ENST00000470621 WFDC9Q8NEX5 89 aa0.18□□□□□ -2.38
SSB-209ENST00000470621 USMG5Q96IX5 58 aa0.18□□□□□ -2.38
SSB-209ENST00000470621 APLNQ9ULZ1 77 aa0.18□□□□□ -2.38
SSB-209ENST00000470621 HUWE1Q7Z6Z7 4374 aaKnown RBP0.18□□□□□ -2.38
SSB-209ENST00000470621 ITSN1Q15811 1721 aa0.18□□□□□ -2.38
SSB-209ENST00000470621 RICTORQ6R327 1708 aa0.18□□□□□ -2.38
SSB-209ENST00000470621 TIAM2Q8IVF5 1701 aa0.18□□□□□ -2.38
SSB-209ENST00000470621 PARP4Q9UKK3 1724 aaKnown RBP0.18□□□□□ -2.38
SSB-209ENST00000470621 PRKDCP78527 4128 aaKnown RBP0.18□□□□□ -2.38
SSB-209ENST00000470621 HMCN2Q8NDA2 5059 aa0.18□□□□□ -2.38
SSB-209ENST00000470621 UGGT2Q9NYU1 1516 aa0.18□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 184.7 ms