RNA–Protein interactions for RNA: ENST00000470537.1

XRN1-208, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-208ENST00000470537 ZNF706Q9Y5V0 76 aaPredicted RBP5.03□□□□□ -1.6
XRN1-208ENST00000470537 IGKV2-28A0A075B6P5 120 aa5.02□□□□□ -1.61
XRN1-208ENST00000470537 IGIPA6NJ69 53 aa5.02□□□□□ -1.61
XRN1-208ENST00000470537 ATP5LO75964 103 aa5.02□□□□□ -1.61
XRN1-208ENST00000470537 SPINK1P00995 79 aa5.02□□□□□ -1.61
XRN1-208ENST00000470537 IGKV2D-28P01615 120 aa5.02□□□□□ -1.61
XRN1-208ENST00000470537 RAB5BP61020 215 aa5.02□□□□□ -1.61
XRN1-208ENST00000470537 KRTAP13-3Q3SY46 172 aa5.02□□□□□ -1.61
XRN1-208ENST00000470537 Q8N8P6 123 aa5.02□□□□□ -1.61
XRN1-208ENST00000470537 DAND5Q8N907 189 aa5.02□□□□□ -1.61
XRN1-208ENST00000470537 COX7B2Q8TF08 81 aa5.02□□□□□ -1.61
XRN1-208ENST00000470537 MUC17Q685J3 4493 aa5.01□□□□□ -1.61
XRN1-208ENST00000470537 A0A1B0GXF2 115 aa5.01□□□□□ -1.61
XRN1-208ENST00000470537 LINC01549A6NIU2 74 aa5.01□□□□□ -1.61
XRN1-208ENST00000470537 CFC1BP0CG36 223 aa5.01□□□□□ -1.61
XRN1-208ENST00000470537 PRLHP81277 87 aa5.01□□□□□ -1.61
XRN1-208ENST00000470537 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.01□□□□□ -1.61
XRN1-208ENST00000470537 FAM19A2Q8N3H0 131 aa5.01□□□□□ -1.61
XRN1-208ENST00000470537 TIMM17AQ99595 171 aa5.01□□□□□ -1.61
XRN1-208ENST00000470537 TMEM126AQ9H061 195 aa5.01□□□□□ -1.61
XRN1-208ENST00000470537 NXT2Q9NPJ8 142 aaKnown RBP5.01□□□□□ -1.61
XRN1-208ENST00000470537 ZC2HC1BQ5TFG8 222 aa5□□□□□ -1.61
XRN1-208ENST00000470537 TINCRA0A1B0GVN0 87 aa4.99□□□□□ -1.61
XRN1-208ENST00000470537 SMIM1B2RUZ4 78 aa4.99□□□□□ -1.61
XRN1-208ENST00000470537 H3BRM9 83 aa4.99□□□□□ -1.61
XRN1-208ENST00000470537 COX17Q14061 63 aa4.99□□□□□ -1.61
XRN1-208ENST00000470537 PEA15Q15121 130 aa4.99□□□□□ -1.61
XRN1-208ENST00000470537 C3orf22Q8N5N4 141 aa4.99□□□□□ -1.61
XRN1-208ENST00000470537 HIGD2AQ9BW72 106 aa4.99□□□□□ -1.61
XRN1-208ENST00000470537 ERASQ7Z444 233 aa4.98□□□□□ -1.61
XRN1-208ENST00000470537 PFN2P35080 140 aa4.97□□□□□ -1.61
XRN1-208ENST00000470537 SFTA2Q6UW10 78 aa4.97□□□□□ -1.61
XRN1-208ENST00000470537 TOMM6Q96B49 74 aa4.97□□□□□ -1.61
XRN1-208ENST00000470537 SCGB3A1Q96QR1 104 aa4.97□□□□□ -1.61
XRN1-208ENST00000470537 IGLV5-45A0A087WSX0 123 aa4.96□□□□□ -1.62
XRN1-208ENST00000470537 TMEM238C9JI98 176 aa4.96□□□□□ -1.62
XRN1-208ENST00000470537 M0R378 163 aa4.96□□□□□ -1.62
XRN1-208ENST00000470537 RPS29P62273 56 aaKnown RBP4.96□□□□□ -1.62
XRN1-208ENST00000470537 Q8NBF4 154 aa4.96□□□□□ -1.62
XRN1-208ENST00000470537 SPRR4Q96PI1 79 aa4.96□□□□□ -1.62
XRN1-208ENST00000470537 TRIAP1O43715 76 aa4.95□□□□□ -1.62
XRN1-208ENST00000470537 SLC25A20O43772 301 aa4.95□□□□□ -1.62
XRN1-208ENST00000470537 VPREB1P12018 145 aa4.95□□□□□ -1.62
XRN1-208ENST00000470537 RAB14P61106 215 aa4.95□□□□□ -1.62
XRN1-208ENST00000470537 S100A12P80511 92 aa4.95□□□□□ -1.62
XRN1-208ENST00000470537 KRTAP5-11Q6L8G4 156 aa4.95□□□□□ -1.62
XRN1-208ENST00000470537 SND1-IT1Q9HBX3 110 aa4.95□□□□□ -1.62
XRN1-208ENST00000470537 SCO1O75880 301 aa4.94□□□□□ -1.62
XRN1-208ENST00000470537 SPINK8P0C7L1 97 aa4.94□□□□□ -1.62
XRN1-208ENST00000470537 KRTAP10-6P60371 365 aaPredicted RBP4.94□□□□□ -1.62
XRN1-208ENST00000470537 SSBP3-AS1Q7Z2R9 100 aa4.94□□□□□ -1.62
XRN1-208ENST00000470537 AKAP14Q86UN6 197 aa4.94□□□□□ -1.62
XRN1-208ENST00000470537 ERG28Q9UKR5 140 aa4.94□□□□□ -1.62
XRN1-208ENST00000470537 PMVKQ15126 192 aa4.93□□□□□ -1.62
XRN1-208ENST00000470537 CST9LQ9H4G1 147 aa4.93□□□□□ -1.62
XRN1-208ENST00000470537 MT-ND4LP03901 98 aa4.92□□□□□ -1.62
XRN1-208ENST00000470537 KRTAP4-1Q9BYQ7 146 aa4.92□□□□□ -1.62
XRN1-208ENST00000470537 C9JQL5 133 aa4.91□□□□□ -1.62
XRN1-208ENST00000470537 SCGB1D1O95968 90 aa4.91□□□□□ -1.62
XRN1-208ENST00000470537 IGKV2-30P06310 120 aa4.91□□□□□ -1.62
XRN1-208ENST00000470537 ETDCA0A1B0GVM5 59 aa4.9□□□□□ -1.63
XRN1-208ENST00000470537 PRYO14603 147 aa4.9□□□□□ -1.63
XRN1-208ENST00000470537 ATP6V1G1O75348 118 aa4.9□□□□□ -1.63
XRN1-208ENST00000470537 PCP4P48539 62 aa4.9□□□□□ -1.63
XRN1-208ENST00000470537 Q8N377 158 aa4.9□□□□□ -1.63
XRN1-208ENST00000470537 SMCR5Q8TEV8 140 aa4.9□□□□□ -1.63
XRN1-208ENST00000470537 IGLV5-39A0A0G2JS06 123 aa4.89□□□□□ -1.63
XRN1-208ENST00000470537 LINC00158P58513 81 aa4.89□□□□□ -1.63
XRN1-208ENST00000470537 LINC00483Q53H64 154 aa4.89□□□□□ -1.63
XRN1-208ENST00000470537 M0R2T5 61 aa4.88□□□□□ -1.63
XRN1-208ENST00000470537 ADCYAP1P18509 176 aa4.88□□□□□ -1.63
XRN1-208ENST00000470537 GAGE2AQ6NT46 116 aa4.88□□□□□ -1.63
XRN1-208ENST00000470537 ZNF625Q96I27 306 aaPredicted RBP4.88□□□□□ -1.63
XRN1-208ENST00000470537 SMCO4Q9NRQ5 59 aa4.88□□□□□ -1.63
XRN1-208ENST00000470537 IGLV8-61A0A075B6I0 122 aa4.87□□□□□ -1.63
XRN1-208ENST00000470537 IGLV9-49A0A0B4J1Y8 123 aa4.87□□□□□ -1.63
XRN1-208ENST00000470537 LINC00587B1AMM8 73 aa4.87□□□□□ -1.63
XRN1-208ENST00000470537 IGLC3P0DOY3 106 aa4.87□□□□□ -1.63
XRN1-208ENST00000470537 NDUFA6P56556 154 aa4.87□□□□□ -1.63
XRN1-208ENST00000470537 MT1HP80294 61 aa4.87□□□□□ -1.63
XRN1-208ENST00000470537 MOBPQ13875 183 aa4.87□□□□□ -1.63
XRN1-208ENST00000470537 KRTAP2-2Q9BYT5 123 aa4.87□□□□□ -1.63
XRN1-208ENST00000470537 KCNQ1DNQ9H478 68 aa4.87□□□□□ -1.63
XRN1-208ENST00000470537 TRAV9-1A0A075B6T8 112 aa4.86□□□□□ -1.63
XRN1-208ENST00000470537 SPRR1AP35321 89 aa4.86□□□□□ -1.63
XRN1-208ENST00000470537 FA2HQ7L5A8 372 aa4.86□□□□□ -1.63
XRN1-208ENST00000470537 LINC01546A6NGU7 62 aa4.85□□□□□ -1.63
XRN1-208ENST00000470537 ZNF22P17026 224 aaPredicted RBP4.84□□□□□ -1.63
XRN1-208ENST00000470537 KIAA1644Q3SXP7 199 aa4.84□□□□□ -1.63
XRN1-208ENST00000470537 PCOTHQ58A44 107 aa4.84□□□□□ -1.63
XRN1-208ENST00000470537 TMEM170BQ5T4T1 132 aa4.84□□□□□ -1.63
XRN1-208ENST00000470537 BOD1L2Q8IYS8 172 aa4.84□□□□□ -1.63
XRN1-208ENST00000470537 LIMD2Q9BT23 127 aa4.84□□□□□ -1.63
XRN1-208ENST00000470537 JOSD1Q15040 202 aaPredicted RBP4.83□□□□□ -1.64
XRN1-208ENST00000470537 COX19Q49B96 90 aa4.83□□□□□ -1.64
XRN1-208ENST00000470537 Q8NDZ9 215 aa4.83□□□□□ -1.64
XRN1-208ENST00000470537 MAP1LC3CQ9BXW4 147 aa4.83□□□□□ -1.64
XRN1-208ENST00000470537 KRTAP4-16G5E9R7 235 aaPredicted RBP4.82□□□□□ -1.64
XRN1-208ENST00000470537 KRTAP19-2Q3LHN2 52 aa4.82□□□□□ -1.64
XRN1-208ENST00000470537 C9orf153Q5TBE3 101 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms