RNA–Protein interactions for RNA: ENST00000470396.1

PSMD4-210, Transcript of proteasome 26S subunit, non-ATPase 4, human

TSL 1 (best)

Gene PSMD4, Length 338 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMD4-210	ENST00000470396	NDUFA12	Q9UI09	145 aa		4.16	□□□□□ -1.74
PSMD4-210	ENST00000470396	RNF213	Q63HN8	5207 aa		4.16	□□□□□ -1.74
PSMD4-210	ENST00000470396		A0A0U1RRA0	63 aa		4.15	□□□□□ -1.75
PSMD4-210	ENST00000470396		J3QQQ9	107 aa		4.15	□□□□□ -1.75
PSMD4-210	ENST00000470396	IGLV7-43	P04211	117 aa		4.15	□□□□□ -1.75
PSMD4-210	ENST00000470396	SMIM13	P0DJ93	91 aa		4.15	□□□□□ -1.75
PSMD4-210	ENST00000470396	SFTA2	Q6UW10	78 aa		4.15	□□□□□ -1.75
PSMD4-210	ENST00000470396	SPINK6	Q6UWN8	80 aa		4.15	□□□□□ -1.75
PSMD4-210	ENST00000470396	MRPL55	Q7Z7F7	128 aa	Known RBP	4.15	□□□□□ -1.75
PSMD4-210	ENST00000470396	LINC00167	Q96N53	147 aa		4.15	□□□□□ -1.75
PSMD4-210	ENST00000470396	IGKV2D-26	A0A0A0MRZ7	120 aa		4.14	□□□□□ -1.75
PSMD4-210	ENST00000470396	GAGE10	A6NGK3	116 aa		4.14	□□□□□ -1.75
PSMD4-210	ENST00000470396	RPL37AP8	A6NKH3	93 aa		4.14	□□□□□ -1.75
PSMD4-210	ENST00000470396	LINC00158	P58513	81 aa		4.14	□□□□□ -1.75
PSMD4-210	ENST00000470396	UBE2B	P63146	152 aa		4.14	□□□□□ -1.75
PSMD4-210	ENST00000470396	PET117	Q6UWS5	81 aa		4.14	□□□□□ -1.75
PSMD4-210	ENST00000470396	HIST3H2BB	Q8N257	126 aa		4.14	□□□□□ -1.75
PSMD4-210	ENST00000470396	PLEKHB2	Q96CS7	222 aa		4.14	□□□□□ -1.75
PSMD4-210	ENST00000470396	MYMX	A0A1B0GTQ4	84 aa		4.13	□□□□□ -1.75
PSMD4-210	ENST00000470396		E9PLD3	99 aa		4.13	□□□□□ -1.75
PSMD4-210	ENST00000470396		J3QL48	77 aa		4.13	□□□□□ -1.75
PSMD4-210	ENST00000470396	EIF4EBP3	O60516	100 aa	Predicted RBP	4.13	□□□□□ -1.75
PSMD4-210	ENST00000470396	KRTDAP	P60985	99 aa		4.13	□□□□□ -1.75
PSMD4-210	ENST00000470396	HERV-K104	P63124	156 aa		4.13	□□□□□ -1.75
PSMD4-210	ENST00000470396	MIR7-3HG	Q8N6C7	128 aa		4.13	□□□□□ -1.75
PSMD4-210	ENST00000470396	DAND5	Q8N907	189 aa		4.13	□□□□□ -1.75
PSMD4-210	ENST00000470396	LINC01600	Q96MT4	127 aa		4.13	□□□□□ -1.75
PSMD4-210	ENST00000470396	HIST1H2BL	Q99880	126 aa		4.13	□□□□□ -1.75
PSMD4-210	ENST00000470396	TTTY13	Q9BZ97	58 aa		4.13	□□□□□ -1.75
PSMD4-210	ENST00000470396	LRP2	P98164	4655 aa		4.12	□□□□□ -1.75
PSMD4-210	ENST00000470396	IGLV1-50	A0A075B6I6	118 aa		4.12	□□□□□ -1.75
PSMD4-210	ENST00000470396	IGKV2-28	A0A075B6P5	120 aa		4.12	□□□□□ -1.75
PSMD4-210	ENST00000470396	IGKV2D-28	P01615	120 aa		4.12	□□□□□ -1.75
PSMD4-210	ENST00000470396	KRTAP1-4	P0C5Y4	121 aa		4.12	□□□□□ -1.75
PSMD4-210	ENST00000470396	KRTAP10-8	P60410	259 aa		4.12	□□□□□ -1.75
PSMD4-210	ENST00000470396	LBH	Q53QV2	105 aa	Predicted RBP	4.12	□□□□□ -1.75
PSMD4-210	ENST00000470396	MEIG1	Q5JSS6	88 aa		4.12	□□□□□ -1.75
PSMD4-210	ENST00000470396	ADAMTSL4-AS1	Q5T5F5	129 aa		4.12	□□□□□ -1.75
PSMD4-210	ENST00000470396	KRTAP13-1	Q8IUC0	172 aa		4.12	□□□□□ -1.75
PSMD4-210	ENST00000470396	LOC107984156	A0A0G2JMH3	177 aa		4.11	□□□□□ -1.75
PSMD4-210	ENST00000470396		A0A0J9YXY3	114 aa		4.11	□□□□□ -1.75
PSMD4-210	ENST00000470396	TMEM238	C9JI98	176 aa		4.11	□□□□□ -1.75
PSMD4-210	ENST00000470396		H0Y9J4	135 aa		4.11	□□□□□ -1.75
PSMD4-210	ENST00000470396	BCE1	O60756	84 aa		4.11	□□□□□ -1.75
PSMD4-210	ENST00000470396	NMU	P48645	174 aa		4.11	□□□□□ -1.75
PSMD4-210	ENST00000470396	HERVK_113	P61574	105 aa		4.11	□□□□□ -1.75
PSMD4-210	ENST00000470396	ANKRD39	Q53RE8	183 aa		4.11	□□□□□ -1.75
PSMD4-210	ENST00000470396	SOSTDC1	Q6X4U4	206 aa		4.11	□□□□□ -1.75
PSMD4-210	ENST00000470396	ARL17A	Q8IVW1	177 aa		4.11	□□□□□ -1.75
PSMD4-210	ENST00000470396	ATOH7	Q8N100	152 aa		4.11	□□□□□ -1.75
PSMD4-210	ENST00000470396	NKAPP1	Q8N9T2	125 aa		4.11	□□□□□ -1.75
PSMD4-210	ENST00000470396	LITAF	Q99732	161 aa		4.11	□□□□□ -1.75
PSMD4-210	ENST00000470396		M0R378	163 aa		4.1	□□□□□ -1.75
PSMD4-210	ENST00000470396	ZNF861P	O60384	105 aa		4.1	□□□□□ -1.75
PSMD4-210	ENST00000470396	LGALS3	P17931	250 aa	Known RBP	4.1	□□□□□ -1.75
PSMD4-210	ENST00000470396	BOD1L2	Q8IYS8	172 aa		4.1	□□□□□ -1.75
PSMD4-210	ENST00000470396	C5orf52	A6NGY3	159 aa		4.09	□□□□□ -1.75
PSMD4-210	ENST00000470396	SNRPE	P62304	92 aa	Known RBP	4.09	□□□□□ -1.75
PSMD4-210	ENST00000470396	RPL24	P83731	157 aa	Known RBP	4.09	□□□□□ -1.75
PSMD4-210	ENST00000470396	REG3G	Q6UW15	175 aa		4.09	□□□□□ -1.75
PSMD4-210	ENST00000470396	DIRC1	Q969H9	104 aa		4.09	□□□□□ -1.75
PSMD4-210	ENST00000470396	TMEM126A	Q9H061	195 aa		4.09	□□□□□ -1.75
PSMD4-210	ENST00000470396	LINC00587	B1AMM8	73 aa		4.08	□□□□□ -1.76
PSMD4-210	ENST00000470396	NCR3	O14931	201 aa		4.08	□□□□□ -1.76
PSMD4-210	ENST00000470396	PRLH	P81277	87 aa		4.08	□□□□□ -1.76
PSMD4-210	ENST00000470396	PCP2	Q8IVA1	136 aa		4.08	□□□□□ -1.76
PSMD4-210	ENST00000470396	PRR26	Q8N8Z3	221 aa		4.08	□□□□□ -1.76
PSMD4-210	ENST00000470396	TRBV10-3	A0A0K0K1G6	114 aa		4.07	□□□□□ -1.76
PSMD4-210	ENST00000470396	C20orf202	A1L168	122 aa		4.07	□□□□□ -1.76
PSMD4-210	ENST00000470396	ZNF815P	A8K554	130 aa		4.07	□□□□□ -1.76
PSMD4-210	ENST00000470396	KRTAP4-16	G5E9R7	235 aa	Predicted RBP	4.07	□□□□□ -1.76
PSMD4-210	ENST00000470396	NPC2	P61916	151 aa		4.07	□□□□□ -1.76
PSMD4-210	ENST00000470396		A0A087X002	238 aa		4.06	□□□□□ -1.76
PSMD4-210	ENST00000470396	TIMM17B	O60830	172 aa		4.06	□□□□□ -1.76
PSMD4-210	ENST00000470396	S100A6	P06703	90 aa		4.06	□□□□□ -1.76
PSMD4-210	ENST00000470396	S100A2	P29034	98 aa		4.06	□□□□□ -1.76
PSMD4-210	ENST00000470396	SPRR1A	P35321	89 aa		4.06	□□□□□ -1.76
PSMD4-210	ENST00000470396	RPL28	P46779	137 aa	Known RBP	4.06	□□□□□ -1.76
PSMD4-210	ENST00000470396	LINC00308	Q8TCZ7	52 aa		4.06	□□□□□ -1.76
PSMD4-210	ENST00000470396	KCNQ1DN	Q9H478	68 aa		4.06	□□□□□ -1.76
PSMD4-210	ENST00000470396	ANAPC11	Q9NYG5	84 aa		4.06	□□□□□ -1.76
PSMD4-210	ENST00000470396	TRBV10-2	A0A0K0K1G8	114 aa		4.05	□□□□□ -1.76
PSMD4-210	ENST00000470396	NDUFC2	O95298	119 aa		4.05	□□□□□ -1.76
PSMD4-210	ENST00000470396	IGLV6-57	P01721	117 aa		4.05	□□□□□ -1.76
PSMD4-210	ENST00000470396	UBE2A	P49459	152 aa		4.05	□□□□□ -1.76
PSMD4-210	ENST00000470396	FAM19A1	Q7Z5A9	133 aa		4.05	□□□□□ -1.76
PSMD4-210	ENST00000470396	SPANXB1	Q9NS25	103 aa	Predicted RBP	4.05	□□□□□ -1.76
PSMD4-210	ENST00000470396	LPA	P08519	4548 aa		4.05	□□□□□ -1.76
PSMD4-210	ENST00000470396	PRY	O14603	147 aa		4.04	□□□□□ -1.76
PSMD4-210	ENST00000470396	KRTAP13-2	Q52LG2	175 aa		4.04	□□□□□ -1.76
PSMD4-210	ENST00000470396	DDT	P30046	118 aa		4.03	□□□□□ -1.76
PSMD4-210	ENST00000470396	LINC00337	Q8N6G1	96 aa		4.03	□□□□□ -1.76
PSMD4-210	ENST00000470396	SMCR5	Q8TEV8	140 aa		4.03	□□□□□ -1.76
PSMD4-210	ENST00000470396	MIEN1	Q9BRT3	115 aa		4.03	□□□□□ -1.76
PSMD4-210	ENST00000470396	SPANXD	Q9BXN6	97 aa		4.03	□□□□□ -1.76
PSMD4-210	ENST00000470396	SPANXC	Q9NY87	97 aa		4.03	□□□□□ -1.76
PSMD4-210	ENST00000470396		B5MCH6	92 aa		4.02	□□□□□ -1.77
PSMD4-210	ENST00000470396	ERC2-IT1	O76042	136 aa		4.02	□□□□□ -1.77
PSMD4-210	ENST00000470396	AKR1D1	P51857	326 aa		4.02	□□□□□ -1.77
PSMD4-210	ENST00000470396	SCGB1D4	Q6XE38	83 aa		4.02	□□□□□ -1.77

Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms