RNA–Protein interactions for RNA: ENST00000470356.3

HMG20B-209, Transcript of high mobility group 20B, humanhuman

TSL 1 (best)

Gene HMG20B, Length 806 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-209ENST00000470356 FAM19A1Q7Z5A9 133 aa18.31■□□□□ 0.52
HMG20B-209ENST00000470356 NDUFA5Q16718 116 aa18.3■□□□□ 0.52
HMG20B-209ENST00000470356 M0R378 163 aa18.29■□□□□ 0.52
HMG20B-209ENST00000470356 LINC00158P58513 81 aa18.26■□□□□ 0.51
HMG20B-209ENST00000470356 CHCHD1Q96BP2 118 aaKnown RBP18.26■□□□□ 0.51
HMG20B-209ENST00000470356 TRAV12-1A0A0B4J245 112 aa18.25■□□□□ 0.51
HMG20B-209ENST00000470356 TMEM223A0PJW6 202 aa18.25■□□□□ 0.51
HMG20B-209ENST00000470356 IGKV2D-26A0A0A0MRZ7 120 aa18.24■□□□□ 0.51
HMG20B-209ENST00000470356 LINC00304Q8N9R0 145 aa18.24■□□□□ 0.51
HMG20B-209ENST00000470356 IFI27L1Q96BM0 104 aa18.24■□□□□ 0.51
HMG20B-209ENST00000470356 YPEL4Q96NS1 127 aa18.24■□□□□ 0.51
HMG20B-209ENST00000470356 PLEKHB2Q96CS7 222 aa18.22■□□□□ 0.51
HMG20B-209ENST00000470356 MUC2Q02817 5179 aa18.21■□□□□ 0.51
HMG20B-209ENST00000470356 CBLN2Q8IUK8 224 aa18.2■□□□□ 0.5
HMG20B-209ENST00000470356 A0A0U1RRA0 63 aa18.18■□□□□ 0.5
HMG20B-209ENST00000470356 CTAG1AP78358 180 aa18.16■□□□□ 0.5
HMG20B-209ENST00000470356 HIGD2AQ9BW72 106 aa18.15■□□□□ 0.5
HMG20B-209ENST00000470356 SMIM13P0DJ93 91 aa18.14■□□□□ 0.49
HMG20B-209ENST00000470356 RETNLBQ9BQ08 111 aa18.14■□□□□ 0.49
HMG20B-209ENST00000470356 ATP6V1G1O75348 118 aa18.13■□□□□ 0.49
HMG20B-209ENST00000470356 HERV-K104P63124 156 aa18.11■□□□□ 0.49
HMG20B-209ENST00000470356 HSBP1O75506 76 aa18.1■□□□□ 0.49
HMG20B-209ENST00000470356 MEIG1Q5JSS6 88 aa18.1■□□□□ 0.49
HMG20B-209ENST00000470356 BOD1L2Q8IYS8 172 aa18.1■□□□□ 0.49
HMG20B-209ENST00000470356 FAM19A2Q8N3H0 131 aa18.09■□□□□ 0.49
HMG20B-209ENST00000470356 C3orf22Q8N5N4 141 aa18.09■□□□□ 0.49
HMG20B-209ENST00000470356 MIR7-3HGQ8N6C7 128 aa18.08■□□□□ 0.48
HMG20B-209ENST00000470356 LINC00587B1AMM8 73 aa18.07■□□□□ 0.48
HMG20B-209ENST00000470356 SPRR4Q96PI1 79 aa18.07■□□□□ 0.48
HMG20B-209ENST00000470356 PRYO14603 147 aa18.06■□□□□ 0.48
HMG20B-209ENST00000470356 NDUFA12Q9UI09 145 aa18.06■□□□□ 0.48
HMG20B-209ENST00000470356 KCNQ1DNQ9H478 68 aa18.04■□□□□ 0.48
HMG20B-209ENST00000470356 MYMXA0A1B0GTQ4 84 aa18.03■□□□□ 0.48
HMG20B-209ENST00000470356 SPRR1AP35321 89 aa18.03■□□□□ 0.48
HMG20B-209ENST00000470356 LINC00337Q8N6G1 96 aa18.03■□□□□ 0.48
HMG20B-209ENST00000470356 ZNF706Q9Y5V0 76 aaPredicted RBP18.03■□□□□ 0.48
HMG20B-209ENST00000470356 A0A0U1RQV1 116 aa18.02■□□□□ 0.48
HMG20B-209ENST00000470356 NCR3O14931 201 aa18.02■□□□□ 0.48
HMG20B-209ENST00000470356 MAP1LC3CQ9BXW4 147 aa18.01■□□□□ 0.47
HMG20B-209ENST00000470356 IGLV7-46A0A075B6I9 117 aa18■□□□□ 0.47
HMG20B-209ENST00000470356 TPRXLQ17RH7 258 aa18■□□□□ 0.47
HMG20B-209ENST00000470356 SPAG11AQ6PDA7 123 aa18■□□□□ 0.47
HMG20B-209ENST00000470356 H0Y8G0 127 aa17.99■□□□□ 0.47
HMG20B-209ENST00000470356 KRTAP4-16G5E9R7 235 aaPredicted RBP17.98■□□□□ 0.47
HMG20B-209ENST00000470356 TRGC2P03986 189 aa17.98■□□□□ 0.47
HMG20B-209ENST00000470356 LEPROTL1O95214 131 aa17.97■□□□□ 0.47
HMG20B-209ENST00000470356 TRBV10-3A0A0K0K1G6 114 aa17.96■□□□□ 0.47
HMG20B-209ENST00000470356 CDIP1Q9H305 208 aa17.96■□□□□ 0.47
HMG20B-209ENST00000470356 ETDCA0A1B0GVM5 59 aa17.95■□□□□ 0.46
HMG20B-209ENST00000470356 SMCR5Q8TEV8 140 aa17.95■□□□□ 0.46
HMG20B-209ENST00000470356 LEPROTO15243 131 aa17.94■□□□□ 0.46
HMG20B-209ENST00000470356 LINC00310P59036 64 aa17.94■□□□□ 0.46
HMG20B-209ENST00000470356 TSPEAR-AS2P59090 65 aa17.94■□□□□ 0.46
HMG20B-209ENST00000470356 LOC107984156A0A0G2JMH3 177 aa17.93■□□□□ 0.46
HMG20B-209ENST00000470356 SERF1AO75920 110 aa17.93■□□□□ 0.46
HMG20B-209ENST00000470356 PLNP26678 52 aa17.93■□□□□ 0.46
HMG20B-209ENST00000470356 ARL17AQ8IVW1 177 aa17.93■□□□□ 0.46
HMG20B-209ENST00000470356 S100A12P80511 92 aa17.9■□□□□ 0.46
HMG20B-209ENST00000470356 C4orf48Q5BLP8 95 aa17.9■□□□□ 0.46
HMG20B-209ENST00000470356 DAND5Q8N907 189 aa17.89■□□□□ 0.45
HMG20B-209ENST00000470356 J3QQQ9 107 aa17.88■□□□□ 0.45
HMG20B-209ENST00000470356 PPDPFQ9H3Y8 114 aa17.88■□□□□ 0.45
HMG20B-209ENST00000470356 HSPB8Q9UJY1 196 aa17.88■□□□□ 0.45
HMG20B-209ENST00000470356 TRBV10-2A0A0K0K1G8 114 aa17.87■□□□□ 0.45
HMG20B-209ENST00000470356 DPM2O94777 84 aa17.86■□□□□ 0.45
HMG20B-209ENST00000470356 Q8NBF4 154 aa17.86■□□□□ 0.45
HMG20B-209ENST00000470356 B5MCH6 92 aa17.85■□□□□ 0.45
HMG20B-209ENST00000470356 LINC00483Q53H64 154 aa17.85■□□□□ 0.45
HMG20B-209ENST00000470356 FABP4P15090 132 aa17.84■□□□□ 0.45
HMG20B-209ENST00000470356 NMUP48645 174 aa17.84■□□□□ 0.45
HMG20B-209ENST00000470356 HERVK_113P61574 105 aa17.84■□□□□ 0.45
HMG20B-209ENST00000470356 DDTP30046 118 aa17.83■□□□□ 0.44
HMG20B-209ENST00000470356 FP248Q71RG6 208 aaPredicted RBP17.83■□□□□ 0.44
HMG20B-209ENST00000470356 PMCHL2Q9BQD1 86 aa17.82■□□□□ 0.44
HMG20B-209ENST00000470356 IGKCP01834 107 aa17.8■□□□□ 0.44
HMG20B-209ENST00000470356 LGALS3P17931 250 aaKnown RBP17.8■□□□□ 0.44
HMG20B-209ENST00000470356 GAGE2AQ6NT46 116 aa17.8■□□□□ 0.44
HMG20B-209ENST00000470356 SPANXB1Q9NS25 103 aaPredicted RBP17.8■□□□□ 0.44
HMG20B-209ENST00000470356 MUC17Q685J3 4493 aa17.79■□□□□ 0.44
HMG20B-209ENST00000470356 MIEN1Q9BRT3 115 aa17.79■□□□□ 0.44
HMG20B-209ENST00000470356 ERC2-IT1O76042 136 aa17.78■□□□□ 0.44
HMG20B-209ENST00000470356 SPINK1P00995 79 aa17.78■□□□□ 0.44
HMG20B-209ENST00000470356 NDUFC2O95298 119 aa17.77■□□□□ 0.44
HMG20B-209ENST00000470356 Q6ZRX8 168 aa17.76■□□□□ 0.43
HMG20B-209ENST00000470356 FAT4Q6V0I7 4981 aa17.75■□□□□ 0.43
HMG20B-209ENST00000470356 COLCA2A8K830 154 aa17.75■□□□□ 0.43
HMG20B-209ENST00000470356 Q9BRP9 147 aa17.75■□□□□ 0.43
HMG20B-209ENST00000470356 IGLV6-57P01721 117 aa17.74■□□□□ 0.43
HMG20B-209ENST00000470356 S100A7L2Q5SY68 101 aa17.73■□□□□ 0.43
HMG20B-209ENST00000470356 LCE2AQ5TA79 106 aaPredicted RBP17.72■□□□□ 0.43
HMG20B-209ENST00000470356 SSBP3-AS1Q7Z2R9 100 aa17.71■□□□□ 0.43
HMG20B-209ENST00000470356 MOBPQ13875 183 aa17.7■□□□□ 0.42
HMG20B-209ENST00000470356 KRTAP13-3Q3SY46 172 aa17.69■□□□□ 0.42
HMG20B-209ENST00000470356 SLC7A5P1Q8MH63 180 aa17.69■□□□□ 0.42
HMG20B-209ENST00000470356 IGLV9-49A0A0B4J1Y8 123 aa17.68■□□□□ 0.42
HMG20B-209ENST00000470356 A0A0J9YXY3 114 aa17.68■□□□□ 0.42
HMG20B-209ENST00000470356 ADAMTSL4-AS1Q5T5F5 129 aa17.68■□□□□ 0.42
HMG20B-209ENST00000470356 SOSTDC1Q6X4U4 206 aa17.68■□□□□ 0.42
HMG20B-209ENST00000470356 E9PLD3 99 aa17.67■□□□□ 0.42
HMG20B-209ENST00000470356 TRAV23DV6A0A075B6W5 121 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms