RNA–Protein interactions for RNA: ENST00000470338.1

TOP3B-215, Transcript of DNA topoisomerase III beta, humanhuman

TSL 5

Gene TOP3B, Length 624 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-215ENST00000470338 TMA7Q9Y2S6 64 aaKnown RBP8.56□□□□□ -1.04
TOP3B-215ENST00000470338 RPL37AP8A6NKH3 93 aa8.55□□□□□ -1.04
TOP3B-215ENST00000470338 ZNF861PO60384 105 aa8.55□□□□□ -1.04
TOP3B-215ENST00000470338 PLNP26678 52 aa8.55□□□□□ -1.04
TOP3B-215ENST00000470338 COA6Q5JTJ3 125 aaKnown RBP8.55□□□□□ -1.04
TOP3B-215ENST00000470338 NKAPP1Q8N9T2 125 aa8.55□□□□□ -1.04
TOP3B-215ENST00000470338 VPREB1P12018 145 aa8.54□□□□□ -1.04
TOP3B-215ENST00000470338 LINC00158P58513 81 aa8.54□□□□□ -1.04
TOP3B-215ENST00000470338 GAGE10A6NGK3 116 aa8.53□□□□□ -1.04
TOP3B-215ENST00000470338 BCE1O60756 84 aa8.53□□□□□ -1.04
TOP3B-215ENST00000470338 DPM2O94777 84 aa8.53□□□□□ -1.04
TOP3B-215ENST00000470338 HERV-K104P63124 156 aa8.53□□□□□ -1.04
TOP3B-215ENST00000470338 RPL24P83731 157 aaKnown RBP8.53□□□□□ -1.04
TOP3B-215ENST00000470338 MAP1LC3CQ9BXW4 147 aa8.53□□□□□ -1.04
TOP3B-215ENST00000470338 LEPROTO15243 131 aa8.52□□□□□ -1.05
TOP3B-215ENST00000470338 IGKCP01834 107 aa8.52□□□□□ -1.05
TOP3B-215ENST00000470338 KRTAP1-4P0C5Y4 121 aa8.52□□□□□ -1.05
TOP3B-215ENST00000470338 Q8NDZ9 215 aa8.52□□□□□ -1.05
TOP3B-215ENST00000470338 PMCHL2Q9BQD1 86 aa8.52□□□□□ -1.05
TOP3B-215ENST00000470338 NDUFA12Q9UI09 145 aa8.52□□□□□ -1.05
TOP3B-215ENST00000470338 IGLV1-50A0A075B6I6 118 aa8.51□□□□□ -1.05
TOP3B-215ENST00000470338 MYMXA0A1B0GTQ4 84 aa8.51□□□□□ -1.05
TOP3B-215ENST00000470338 SMIM13P0DJ93 91 aa8.51□□□□□ -1.05
TOP3B-215ENST00000470338 TSPEAR-AS2P59090 65 aa8.51□□□□□ -1.05
TOP3B-215ENST00000470338 PLEKHB2Q96CS7 222 aa8.51□□□□□ -1.05
TOP3B-215ENST00000470338 A0A0U1RRA0 63 aa8.5□□□□□ -1.05
TOP3B-215ENST00000470338 LINC00587B1AMM8 73 aa8.5□□□□□ -1.05
TOP3B-215ENST00000470338 IGKV2-28A0A075B6P5 120 aa8.49□□□□□ -1.05
TOP3B-215ENST00000470338 J3QQQ9 107 aa8.49□□□□□ -1.05
TOP3B-215ENST00000470338 IGKV2D-28P01615 120 aa8.49□□□□□ -1.05
TOP3B-215ENST00000470338 RPL28P46779 137 aaKnown RBP8.49□□□□□ -1.05
TOP3B-215ENST00000470338 MEIG1Q5JSS6 88 aa8.49□□□□□ -1.05
TOP3B-215ENST00000470338 PRR26Q8N8Z3 221 aa8.49□□□□□ -1.05
TOP3B-215ENST00000470338 SYS1-DBNDD2H3BUS1 97 aa8.48□□□□□ -1.05
TOP3B-215ENST00000470338 S100A2P29034 98 aa8.48□□□□□ -1.05
TOP3B-215ENST00000470338 HERVK_113P61574 105 aa8.48□□□□□ -1.05
TOP3B-215ENST00000470338 SNRPEP62304 92 aaKnown RBP8.48□□□□□ -1.05
TOP3B-215ENST00000470338 KRTAP13-1Q8IUC0 172 aa8.48□□□□□ -1.05
TOP3B-215ENST00000470338 MIR7-3HGQ8N6C7 128 aa8.48□□□□□ -1.05
TOP3B-215ENST00000470338 C5orf52A6NGY3 159 aa8.47□□□□□ -1.05
TOP3B-215ENST00000470338 NMUP48645 174 aa8.47□□□□□ -1.05
TOP3B-215ENST00000470338 HIST3H2BBQ8N257 126 aa8.46□□□□□ -1.06
TOP3B-215ENST00000470338 TMEM126AQ9H061 195 aa8.46□□□□□ -1.06
TOP3B-215ENST00000470338 LOC107984156A0A0G2JMH3 177 aa8.45□□□□□ -1.06
TOP3B-215ENST00000470338 M0R378 163 aa8.45□□□□□ -1.06
TOP3B-215ENST00000470338 LINC01545Q5VT33 79 aa8.45□□□□□ -1.06
TOP3B-215ENST00000470338 PET117Q6UWS5 81 aa8.45□□□□□ -1.06
TOP3B-215ENST00000470338 ARL17AQ8IVW1 177 aa8.45□□□□□ -1.06
TOP3B-215ENST00000470338 TMEM238C9JI98 176 aa8.44□□□□□ -1.06
TOP3B-215ENST00000470338 E9PLD3 99 aa8.44□□□□□ -1.06
TOP3B-215ENST00000470338 LGALS3P17931 250 aaKnown RBP8.44□□□□□ -1.06
TOP3B-215ENST00000470338 UBE2AP49459 152 aa8.44□□□□□ -1.06
TOP3B-215ENST00000470338 BOD1L2Q8IYS8 172 aa8.44□□□□□ -1.06
TOP3B-215ENST00000470338 IGKV2D-26A0A0A0MRZ7 120 aa8.42□□□□□ -1.06
TOP3B-215ENST00000470338 C3orf79P0CE67 100 aa8.42□□□□□ -1.06
TOP3B-215ENST00000470338 RPL13AP40429 203 aaKnown RBP8.42□□□□□ -1.06
TOP3B-215ENST00000470338 HIST1H2BLQ99880 126 aa8.42□□□□□ -1.06
TOP3B-215ENST00000470338 FAM19A1Q7Z5A9 133 aa8.41□□□□□ -1.06
TOP3B-215ENST00000470338 DAND5Q8N907 189 aa8.41□□□□□ -1.06
TOP3B-215ENST00000470338 PRLHP81277 87 aa8.4□□□□□ -1.06
TOP3B-215ENST00000470338 A0A0J9YXY3 114 aa8.39□□□□□ -1.07
TOP3B-215ENST00000470338 NCR3O14931 201 aa8.39□□□□□ -1.07
TOP3B-215ENST00000470338 KCNQ1DNQ9H478 68 aa8.39□□□□□ -1.07
TOP3B-215ENST00000470338 A0A087X002 238 aa8.38□□□□□ -1.07
TOP3B-215ENST00000470338 PRYO14603 147 aa8.38□□□□□ -1.07
TOP3B-215ENST00000470338 UBR4Q5T4S7 5183 aa8.37□□□□□ -1.07
TOP3B-215ENST00000470338 TRBV10-2A0A0K0K1G8 114 aa8.37□□□□□ -1.07
TOP3B-215ENST00000470338 CRYGAP11844 174 aa8.37□□□□□ -1.07
TOP3B-215ENST00000470338 SPRR1AP35321 89 aa8.37□□□□□ -1.07
TOP3B-215ENST00000470338 KRTDAPP60985 99 aa8.37□□□□□ -1.07
TOP3B-215ENST00000470338 ADAMTSL4-AS1Q5T5F5 129 aa8.37□□□□□ -1.07
TOP3B-215ENST00000470338 TRBV10-3A0A0K0K1G6 114 aa8.36□□□□□ -1.07
TOP3B-215ENST00000470338 NDUFC2O95298 119 aa8.36□□□□□ -1.07
TOP3B-215ENST00000470338 FAM229BQ4G0N7 80 aa8.36□□□□□ -1.07
TOP3B-215ENST00000470338 ANAPC11Q9NYG5 84 aa8.36□□□□□ -1.07
TOP3B-215ENST00000470338 LRP2P98164 4655 aa8.35□□□□□ -1.07
TOP3B-215ENST00000470338 C20orf202A1L168 122 aa8.35□□□□□ -1.07
TOP3B-215ENST00000470338 KRTAP4-16G5E9R7 235 aaPredicted RBP8.35□□□□□ -1.07
TOP3B-215ENST00000470338 SOSTDC1Q6X4U4 206 aa8.35□□□□□ -1.07
TOP3B-215ENST00000470338 LINC00337Q8N6G1 96 aa8.35□□□□□ -1.07
TOP3B-215ENST00000470338 MIEN1Q9BRT3 115 aa8.35□□□□□ -1.07
TOP3B-215ENST00000470338 EIF4EBP3O60516 100 aaPredicted RBP8.34□□□□□ -1.07
TOP3B-215ENST00000470338 AKR1D1P51857 326 aa8.34□□□□□ -1.07
TOP3B-215ENST00000470338 LITAFQ99732 161 aa8.34□□□□□ -1.07
TOP3B-215ENST00000470338 SPANXB1Q9NS25 103 aaPredicted RBP8.34□□□□□ -1.07
TOP3B-215ENST00000470338 TIMM17BO60830 172 aa8.33□□□□□ -1.08
TOP3B-215ENST00000470338 KRTAP13-2Q52LG2 175 aa8.33□□□□□ -1.08
TOP3B-215ENST00000470338 HIGD2AQ9BW72 106 aa8.33□□□□□ -1.08
TOP3B-215ENST00000470338 ZNF815PA8K554 130 aa8.32□□□□□ -1.08
TOP3B-215ENST00000470338 DDTP30046 118 aa8.32□□□□□ -1.08
TOP3B-215ENST00000470338 TYMSOSQ8TAI1 123 aa8.32□□□□□ -1.08
TOP3B-215ENST00000470338 TTTY13Q9BZ97 58 aa8.32□□□□□ -1.08
TOP3B-215ENST00000470338 IGLV6-57P01721 117 aa8.31□□□□□ -1.08
TOP3B-215ENST00000470338 NPC2P61916 151 aa8.31□□□□□ -1.08
TOP3B-215ENST00000470338 S100A12P80511 92 aa8.31□□□□□ -1.08
TOP3B-215ENST00000470338 ETDCA0A1B0GVM5 59 aa8.3□□□□□ -1.08
TOP3B-215ENST00000470338 LINC00308Q8TCZ7 52 aa8.3□□□□□ -1.08
TOP3B-215ENST00000470338 LOC105371267A0A1B0GV96 52 aa8.29□□□□□ -1.08
TOP3B-215ENST00000470338 B5MCH6 92 aa8.29□□□□□ -1.08
TOP3B-215ENST00000470338 SCGB1D1O95968 90 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms