RNA–Protein interactions for RNA: ENST00000469670.1

TTC28-205, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 3

Gene TTC28, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-205ENST00000469670 TMEM218A2RU14 115 aa10.14□□□□□ -0.79
TTC28-205ENST00000469670 KRTAP19-2Q3LHN2 52 aa10.14□□□□□ -0.79
TTC28-205ENST00000469670 XP32Q5T750 250 aa10.14□□□□□ -0.79
TTC28-205ENST00000469670 ERASQ7Z444 233 aa10.14□□□□□ -0.79
TTC28-205ENST00000469670 Q8NDZ9 215 aa10.13□□□□□ -0.79
TTC28-205ENST00000469670 SCGB3A1Q96QR1 104 aa10.13□□□□□ -0.79
TTC28-205ENST00000469670 ADCYAP1P18509 176 aa10.11□□□□□ -0.79
TTC28-205ENST00000469670 ERG28Q9UKR5 140 aa10.11□□□□□ -0.79
TTC28-205ENST00000469670 C10orf91Q5T1B1 145 aa10.1□□□□□ -0.79
TTC28-205ENST00000469670 FAM19A2Q8N3H0 131 aa10.1□□□□□ -0.79
TTC28-205ENST00000469670 SEC11CQ9BY50 192 aa10.1□□□□□ -0.79
TTC28-205ENST00000469670 MRPL18Q9H0U6 180 aaKnown RBP10.1□□□□□ -0.79
TTC28-205ENST00000469670 CST9LQ9H4G1 147 aa10.1□□□□□ -0.79
TTC28-205ENST00000469670 Q8N377 158 aa10.09□□□□□ -0.79
TTC28-205ENST00000469670 H3BRM9 83 aa10.08□□□□□ -0.8
TTC28-205ENST00000469670 LORP23490 312 aaPredicted RBP10.08□□□□□ -0.8
TTC28-205ENST00000469670 RPS29P62273 56 aaKnown RBP10.07□□□□□ -0.8
TTC28-205ENST00000469670 COX17Q14061 63 aa10.07□□□□□ -0.8
TTC28-205ENST00000469670 APOC3P02656 99 aa10.06□□□□□ -0.8
TTC28-205ENST00000469670 IGLV5-39A0A0G2JS06 123 aa10.05□□□□□ -0.8
TTC28-205ENST00000469670 KRTAP10-6P60371 365 aaPredicted RBP10.05□□□□□ -0.8
TTC28-205ENST00000469670 PMVKQ15126 192 aa10.05□□□□□ -0.8
TTC28-205ENST00000469670 SMCR5Q8TEV8 140 aa10.05□□□□□ -0.8
TTC28-205ENST00000469670 ZNF625Q96I27 306 aaPredicted RBP10.05□□□□□ -0.8
TTC28-205ENST00000469670 SLC25A20O43772 301 aa10.04□□□□□ -0.8
TTC28-205ENST00000469670 SVBPQ8N300 66 aa10.04□□□□□ -0.8
TTC28-205ENST00000469670 LINC00483Q53H64 154 aa10.03□□□□□ -0.8
TTC28-205ENST00000469670 LINC01549A6NIU2 74 aa10.02□□□□□ -0.81
TTC28-205ENST00000469670 MOBPQ13875 183 aa10.02□□□□□ -0.81
TTC28-205ENST00000469670 SNAPINO95295 136 aa10.01□□□□□ -0.81
TTC28-205ENST00000469670 IGLV9-49A0A0B4J1Y8 123 aa10□□□□□ -0.81
TTC28-205ENST00000469670 PRYO14603 147 aa10□□□□□ -0.81
TTC28-205ENST00000469670 KIAA1644Q3SXP7 199 aa10□□□□□ -0.81
TTC28-205ENST00000469670 GAGE2AQ6NT46 116 aa10□□□□□ -0.81
TTC28-205ENST00000469670 SSBP3-AS1Q7Z2R9 100 aa10□□□□□ -0.81
TTC28-205ENST00000469670 IGLV8-61A0A075B6I0 122 aa9.99□□□□□ -0.81
TTC28-205ENST00000469670 IGLC3P0DOY3 106 aa9.99□□□□□ -0.81
TTC28-205ENST00000469670 PCOTHQ58A44 107 aa9.99□□□□□ -0.81
TTC28-205ENST00000469670 ANAPC16Q96DE5 110 aa9.99□□□□□ -0.81
TTC28-205ENST00000469670 ZNF22P17026 224 aaPredicted RBP9.98□□□□□ -0.81
TTC28-205ENST00000469670 SPRR1AP35321 89 aa9.98□□□□□ -0.81
TTC28-205ENST00000469670 MT-ND4LP03901 98 aa9.97□□□□□ -0.81
TTC28-205ENST00000469670 ETDCA0A1B0GVM5 59 aa9.96□□□□□ -0.82
TTC28-205ENST00000469670 LINC01546A6NGU7 62 aa9.96□□□□□ -0.82
TTC28-205ENST00000469670 KRTAP4-16G5E9R7 235 aaPredicted RBP9.96□□□□□ -0.82
TTC28-205ENST00000469670 KRTAP9-7A8MTY7 169 aa9.95□□□□□ -0.82
TTC28-205ENST00000469670 LINC00158P58513 81 aa9.95□□□□□ -0.82
TTC28-205ENST00000469670 RHEBQ15382 184 aa9.95□□□□□ -0.82
TTC28-205ENST00000469670 SFTA2Q6UW10 78 aa9.95□□□□□ -0.82
TTC28-205ENST00000469670 KCNQ1DNQ9H478 68 aa9.95□□□□□ -0.82
TTC28-205ENST00000469670 M0R2T5 61 aa9.94□□□□□ -0.82
TTC28-205ENST00000469670 NDUFA6P56556 154 aa9.93□□□□□ -0.82
TTC28-205ENST00000469670 RPS10P5Q9NQ39 176 aa9.93□□□□□ -0.82
TTC28-205ENST00000469670 A0A0U1RRA0 63 aa9.92□□□□□ -0.82
TTC28-205ENST00000469670 NCR3O14931 201 aa9.92□□□□□ -0.82
TTC28-205ENST00000469670 ERC2-IT1O76042 136 aa9.91□□□□□ -0.82
TTC28-205ENST00000469670 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.9□□□□□ -0.82
TTC28-205ENST00000469670 BOD1L2Q8IYS8 172 aa9.9□□□□□ -0.82
TTC28-205ENST00000469670 SMCO4Q9NRQ5 59 aa9.9□□□□□ -0.82
TTC28-205ENST00000469670 FA2HQ7L5A8 372 aa9.89□□□□□ -0.83
TTC28-205ENST00000469670 TRBV10-3A0A0K0K1G6 114 aa9.88□□□□□ -0.83
TTC28-205ENST00000469670 B5MCH6 92 aa9.88□□□□□ -0.83
TTC28-205ENST00000469670 TMEM170BQ5T4T1 132 aa9.87□□□□□ -0.83
TTC28-205ENST00000469670 C9orf92A6NGG3 77 aa9.86□□□□□ -0.83
TTC28-205ENST00000469670 C11orf86A6NJI1 115 aa9.86□□□□□ -0.83
TTC28-205ENST00000469670 C9orf153Q5TBE3 101 aa9.86□□□□□ -0.83
TTC28-205ENST00000469670 SMIM13P0DJ93 91 aa9.85□□□□□ -0.83
TTC28-205ENST00000469670 TRAV9-1A0A075B6T8 112 aa9.84□□□□□ -0.83
TTC28-205ENST00000469670 S100A12P80511 92 aa9.84□□□□□ -0.83
TTC28-205ENST00000469670 Q9BRP9 147 aa9.84□□□□□ -0.83
TTC28-205ENST00000469670 FLGP20930 4061 aaPredicted RBP9.82□□□□□ -0.84
TTC28-205ENST00000469670 A0A096LNJ9 63 aa9.82□□□□□ -0.84
TTC28-205ENST00000469670 MIR7-3HGQ8N6C7 128 aa9.82□□□□□ -0.84
TTC28-205ENST00000469670 COLCA2A8K830 154 aa9.81□□□□□ -0.84
TTC28-205ENST00000469670 COX6B2Q6YFQ2 88 aa9.81□□□□□ -0.84
TTC28-205ENST00000469670 BAGE3Q86Y29 109 aa9.81□□□□□ -0.84
TTC28-205ENST00000469670 YPEL4Q96NS1 127 aa9.81□□□□□ -0.84
TTC28-205ENST00000469670 S100PP25815 95 aa9.8□□□□□ -0.84
TTC28-205ENST00000469670 MEIG1Q5JSS6 88 aa9.8□□□□□ -0.84
TTC28-205ENST00000469670 Q6ZRX8 168 aa9.79□□□□□ -0.84
TTC28-205ENST00000469670 LIMD2Q9BT23 127 aa9.78□□□□□ -0.84
TTC28-205ENST00000469670 TMEM223A0PJW6 202 aa9.76□□□□□ -0.85
TTC28-205ENST00000469670 IGLV6-57P01721 117 aa9.76□□□□□ -0.85
TTC28-205ENST00000469670 HBDP02042 147 aa9.76□□□□□ -0.85
TTC28-205ENST00000469670 DDTP30046 118 aa9.76□□□□□ -0.85
TTC28-205ENST00000469670 FABP9Q0Z7S8 132 aa9.74□□□□□ -0.85
TTC28-205ENST00000469670 PMCHL1Q16048 86 aa9.74□□□□□ -0.85
TTC28-205ENST00000469670 HRCT1Q6UXD1 115 aa9.74□□□□□ -0.85
TTC28-205ENST00000469670 CHTOPQ9Y3Y2 248 aaKnown RBP9.74□□□□□ -0.85
TTC28-205ENST00000469670 HERV-K104P63124 156 aa9.73□□□□□ -0.85
TTC28-205ENST00000469670 URB1-AS1Q96HZ7 61 aa9.73□□□□□ -0.85
TTC28-205ENST00000469670 LINC00587B1AMM8 73 aa9.72□□□□□ -0.85
TTC28-205ENST00000469670 LINC00614P0C842 121 aa9.72□□□□□ -0.85
TTC28-205ENST00000469670 ST20-AS1Q8NBB2 130 aa9.72□□□□□ -0.85
TTC28-205ENST00000469670 TMA7Q9Y2S6 64 aaKnown RBP9.72□□□□□ -0.85
TTC28-205ENST00000469670 TRBV10-2A0A0K0K1G8 114 aa9.71□□□□□ -0.86
TTC28-205ENST00000469670 JOSD1Q15040 202 aaPredicted RBP9.71□□□□□ -0.86
TTC28-205ENST00000469670 COX19Q49B96 90 aa9.71□□□□□ -0.86
TTC28-205ENST00000469670 MAP1LC3CQ9BXW4 147 aa9.7□□□□□ -0.86
TTC28-205ENST00000469670 SSPOA2VEC9 5147 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms