RNA–Protein interactions for RNA: ENST00000469558.1

MCF2L-222, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 616 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-222ENST00000469558 H0Y9J4 135 aa7.04□□□□□ -1.28
MCF2L-222ENST00000469558 DPM2O94777 84 aa7.04□□□□□ -1.28
MCF2L-222ENST00000469558 KRTAP1-4P0C5Y4 121 aa7.04□□□□□ -1.28
MCF2L-222ENST00000469558 LBHQ53QV2 105 aaPredicted RBP7.04□□□□□ -1.28
MCF2L-222ENST00000469558 RPL37AP8A6NKH3 93 aa7.03□□□□□ -1.28
MCF2L-222ENST00000469558 SYS1-DBNDD2H3BUS1 97 aa7.03□□□□□ -1.28
MCF2L-222ENST00000469558 ATP6V1G1O75348 118 aa7.03□□□□□ -1.28
MCF2L-222ENST00000469558 IGKCP01834 107 aa7.03□□□□□ -1.28
MCF2L-222ENST00000469558 SMIM13P0DJ93 91 aa7.03□□□□□ -1.28
MCF2L-222ENST00000469558 REG3GQ6UW15 175 aa7.03□□□□□ -1.28
MCF2L-222ENST00000469558 KRTAP13-1Q8IUC0 172 aa7.03□□□□□ -1.28
MCF2L-222ENST00000469558 NDUFA12Q9UI09 145 aa7.03□□□□□ -1.28
MCF2L-222ENST00000469558 A0A0U1RRA0 63 aa7.02□□□□□ -1.29
MCF2L-222ENST00000469558 LEPROTO15243 131 aa7.02□□□□□ -1.29
MCF2L-222ENST00000469558 LINC01545Q5VT33 79 aa7.02□□□□□ -1.29
MCF2L-222ENST00000469558 MAP1LC3CQ9BXW4 147 aa7.02□□□□□ -1.29
MCF2L-222ENST00000469558 LINC00158P58513 81 aa7.01□□□□□ -1.29
MCF2L-222ENST00000469558 DIRC1Q969H9 104 aa7.01□□□□□ -1.29
MCF2L-222ENST00000469558 IGLV1-50A0A075B6I6 118 aa7□□□□□ -1.29
MCF2L-222ENST00000469558 J3QQQ9 107 aa7□□□□□ -1.29
MCF2L-222ENST00000469558 ZNF861PO60384 105 aa7□□□□□ -1.29
MCF2L-222ENST00000469558 BCE1O60756 84 aa7□□□□□ -1.29
MCF2L-222ENST00000469558 C3orf79P0CE67 100 aa7□□□□□ -1.29
MCF2L-222ENST00000469558 HERV-K104P63124 156 aa7□□□□□ -1.29
MCF2L-222ENST00000469558 MIR7-3HGQ8N6C7 128 aa7□□□□□ -1.29
MCF2L-222ENST00000469558 NKAPP1Q8N9T2 125 aa7□□□□□ -1.29
MCF2L-222ENST00000469558 PLEKHB2Q96CS7 222 aa7□□□□□ -1.29
MCF2L-222ENST00000469558 UBR4Q5T4S7 5183 aa7□□□□□ -1.29
MCF2L-222ENST00000469558 IGKV2-28A0A075B6P5 120 aa6.99□□□□□ -1.29
MCF2L-222ENST00000469558 MYMXA0A1B0GTQ4 84 aa6.99□□□□□ -1.29
MCF2L-222ENST00000469558 IGKV2D-28P01615 120 aa6.99□□□□□ -1.29
MCF2L-222ENST00000469558 S100A1P23297 94 aa6.99□□□□□ -1.29
MCF2L-222ENST00000469558 TMEM238C9JI98 176 aa6.98□□□□□ -1.29
MCF2L-222ENST00000469558 E9PLD3 99 aa6.98□□□□□ -1.29
MCF2L-222ENST00000469558 PET117Q6UWS5 81 aa6.98□□□□□ -1.29
MCF2L-222ENST00000469558 LOC107984156A0A0G2JMH3 177 aa6.97□□□□□ -1.29
MCF2L-222ENST00000469558 M0R378 163 aa6.97□□□□□ -1.29
MCF2L-222ENST00000469558 EIF4EBP3O60516 100 aaPredicted RBP6.97□□□□□ -1.29
MCF2L-222ENST00000469558 RPL24P83731 157 aaKnown RBP6.97□□□□□ -1.29
MCF2L-222ENST00000469558 MEIG1Q5JSS6 88 aa6.97□□□□□ -1.29
MCF2L-222ENST00000469558 ARL17AQ8IVW1 177 aa6.97□□□□□ -1.29
MCF2L-222ENST00000469558 PRR26Q8N8Z3 221 aa6.97□□□□□ -1.29
MCF2L-222ENST00000469558 DAND5Q8N907 189 aa6.97□□□□□ -1.29
MCF2L-222ENST00000469558 IGKV2D-26A0A0A0MRZ7 120 aa6.96□□□□□ -1.3
MCF2L-222ENST00000469558 NMUP48645 174 aa6.96□□□□□ -1.3
MCF2L-222ENST00000469558 HERVK_113P61574 105 aa6.96□□□□□ -1.3
MCF2L-222ENST00000469558 TMEM126AQ9H061 195 aa6.96□□□□□ -1.3
MCF2L-222ENST00000469558 A0A0J9YXY3 114 aa6.95□□□□□ -1.3
MCF2L-222ENST00000469558 ADAMTSL4-AS1Q5T5F5 129 aa6.95□□□□□ -1.3
MCF2L-222ENST00000469558 SOSTDC1Q6X4U4 206 aa6.95□□□□□ -1.3
MCF2L-222ENST00000469558 BOD1L2Q8IYS8 172 aa6.95□□□□□ -1.3
MCF2L-222ENST00000469558 LITAFQ99732 161 aa6.95□□□□□ -1.3
MCF2L-222ENST00000469558 LGALS3P17931 250 aaKnown RBP6.94□□□□□ -1.3
MCF2L-222ENST00000469558 RPL28P46779 137 aaKnown RBP6.94□□□□□ -1.3
MCF2L-222ENST00000469558 TTTY13Q9BZ97 58 aa6.94□□□□□ -1.3
MCF2L-222ENST00000469558 LINC00587B1AMM8 73 aa6.93□□□□□ -1.3
MCF2L-222ENST00000469558 NCR3O14931 201 aa6.93□□□□□ -1.3
MCF2L-222ENST00000469558 KRTDAPP60985 99 aa6.93□□□□□ -1.3
MCF2L-222ENST00000469558 PRLHP81277 87 aa6.93□□□□□ -1.3
MCF2L-222ENST00000469558 HIST3H2BBQ8N257 126 aa6.93□□□□□ -1.3
MCF2L-222ENST00000469558 A0A087X002 238 aa6.92□□□□□ -1.3
MCF2L-222ENST00000469558 KRTAP4-16G5E9R7 235 aaPredicted RBP6.92□□□□□ -1.3
MCF2L-222ENST00000469558 SPRR1AP35321 89 aa6.92□□□□□ -1.3
MCF2L-222ENST00000469558 ANKRD39Q53RE8 183 aa6.91□□□□□ -1.3
MCF2L-222ENST00000469558 HIST1H2BLQ99880 126 aa6.91□□□□□ -1.3
MCF2L-222ENST00000469558 TRBV10-3A0A0K0K1G6 114 aa6.9□□□□□ -1.3
MCF2L-222ENST00000469558 UBE2AP49459 152 aa6.9□□□□□ -1.3
MCF2L-222ENST00000469558 FAM19A1Q7Z5A9 133 aa6.9□□□□□ -1.3
MCF2L-222ENST00000469558 KCNQ1DNQ9H478 68 aa6.9□□□□□ -1.3
MCF2L-222ENST00000469558 ANAPC11Q9NYG5 84 aa6.9□□□□□ -1.3
MCF2L-222ENST00000469558 PRYO14603 147 aa6.89□□□□□ -1.31
MCF2L-222ENST00000469558 KRTAP13-2Q52LG2 175 aa6.89□□□□□ -1.31
MCF2L-222ENST00000469558 ATOH7Q8N100 152 aa6.89□□□□□ -1.31
MCF2L-222ENST00000469558 LRP2P98164 4655 aa6.88□□□□□ -1.31
MCF2L-222ENST00000469558 TRBV10-2A0A0K0K1G8 114 aa6.88□□□□□ -1.31
MCF2L-222ENST00000469558 TIMM17BO60830 172 aa6.88□□□□□ -1.31
MCF2L-222ENST00000469558 NDUFC2O95298 119 aa6.88□□□□□ -1.31
MCF2L-222ENST00000469558 ZNF815PA8K554 130 aa6.87□□□□□ -1.31
MCF2L-222ENST00000469558 IGLV6-57P01721 117 aa6.87□□□□□ -1.31
MCF2L-222ENST00000469558 NPC2P61916 151 aa6.87□□□□□ -1.31
MCF2L-222ENST00000469558 LINC00337Q8N6G1 96 aa6.87□□□□□ -1.31
MCF2L-222ENST00000469558 SPANXB1Q9NS25 103 aaPredicted RBP6.87□□□□□ -1.31
MCF2L-222ENST00000469558 LINC00308Q8TCZ7 52 aa6.86□□□□□ -1.31
MCF2L-222ENST00000469558 C20orf202A1L168 122 aa6.85□□□□□ -1.31
MCF2L-222ENST00000469558 RPL13AP40429 203 aaKnown RBP6.85□□□□□ -1.31
MCF2L-222ENST00000469558 PCP2Q8IVA1 136 aa6.85□□□□□ -1.31
MCF2L-222ENST00000469558 DDTP30046 118 aa6.84□□□□□ -1.31
MCF2L-222ENST00000469558 FAM229BQ4G0N7 80 aa6.84□□□□□ -1.31
MCF2L-222ENST00000469558 SMCR5Q8TEV8 140 aa6.84□□□□□ -1.31
MCF2L-222ENST00000469558 C5orf52A6NGY3 159 aa6.83□□□□□ -1.32
MCF2L-222ENST00000469558 B5MCH6 92 aa6.83□□□□□ -1.32
MCF2L-222ENST00000469558 CRYGAP11844 174 aa6.83□□□□□ -1.32
MCF2L-222ENST00000469558 SNRPEP62304 92 aaKnown RBP6.83□□□□□ -1.32
MCF2L-222ENST00000469558 SPRR4Q96PI1 79 aa6.83□□□□□ -1.32
MCF2L-222ENST00000469558 MIEN1Q9BRT3 115 aa6.83□□□□□ -1.32
MCF2L-222ENST00000469558 HIGD2AQ9BW72 106 aa6.83□□□□□ -1.32
MCF2L-222ENST00000469558 ERC2-IT1O76042 136 aa6.82□□□□□ -1.32
MCF2L-222ENST00000469558 Q9BRP9 147 aa6.82□□□□□ -1.32
MCF2L-222ENST00000469558 SPANXDQ9BXN6 97 aa6.82□□□□□ -1.32
MCF2L-222ENST00000469558 SPANXCQ9NY87 97 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms