RNA–Protein interactions for RNA: ENST00000469534.1

ITGA6-208, Transcript of integrin subunit alpha 6, humanhuman

TSL 2

Gene ITGA6, Length 581 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA6-208ENST00000469534 SYCNQ0VAF6 134 aa3.4□□□□□ -1.87
ITGA6-208ENST00000469534 GAGE2BQ13066 116 aa3.4□□□□□ -1.87
ITGA6-208ENST00000469534 SRSF9Q13242 221 aaKnown RBP eCLIP3.4□□□□□ -1.87
ITGA6-208ENST00000469534 GAGE2EQ4V326 116 aa3.4□□□□□ -1.87
ITGA6-208ENST00000469534 MIR7-3HGQ8N6C7 128 aa3.4□□□□□ -1.87
ITGA6-208ENST00000469534 HIST1H4GQ99525 98 aa3.4□□□□□ -1.87
ITGA6-208ENST00000469534 LITAFQ99732 161 aa3.4□□□□□ -1.87
ITGA6-208ENST00000469534 GAGE2DQ9UEU5 116 aa3.4□□□□□ -1.87
ITGA6-208ENST00000469534 ERG28Q9UKR5 140 aa3.4□□□□□ -1.87
ITGA6-208ENST00000469534 IGKV2-24A0A0C4DH68 120 aa3.39□□□□□ -1.87
ITGA6-208ENST00000469534 DLEU1O43261 78 aa3.39□□□□□ -1.87
ITGA6-208ENST00000469534 SOSTDC1Q6X4U4 206 aa3.39□□□□□ -1.87
ITGA6-208ENST00000469534 MUSTN1Q8IVN3 82 aa3.39□□□□□ -1.87
ITGA6-208ENST00000469534 Q8N814 137 aa3.39□□□□□ -1.87
ITGA6-208ENST00000469534 XAGE1AQ9HD64 81 aa3.39□□□□□ -1.87
ITGA6-208ENST00000469534 K7ERJ3 54 aa3.38□□□□□ -1.87
ITGA6-208ENST00000469534 CHTF8P0CG12 524 aa3.38□□□□□ -1.87
ITGA6-208ENST00000469534 CXCL5P42830 114 aa3.38□□□□□ -1.87
ITGA6-208ENST00000469534 FXYD2P54710 66 aa3.38□□□□□ -1.87
ITGA6-208ENST00000469534 HERV-K104P63124 156 aa3.38□□□□□ -1.87
ITGA6-208ENST00000469534 PRR3P79522 188 aaKnown RBP3.38□□□□□ -1.87
ITGA6-208ENST00000469534 C2orf48Q96LS8 159 aa3.38□□□□□ -1.87
ITGA6-208ENST00000469534 KMT2AQ03164 3969 aa3.38□□□□□ -1.87
ITGA6-208ENST00000469534 FAM168BA1KXE4 195 aa3.37□□□□□ -1.87
ITGA6-208ENST00000469534 TMEM238C9JI98 176 aa3.37□□□□□ -1.87
ITGA6-208ENST00000469534 H7C2G1 150 aa3.37□□□□□ -1.87
ITGA6-208ENST00000469534 NCR3O14931 201 aa3.37□□□□□ -1.87
ITGA6-208ENST00000469534 HAMPP81172 84 aa3.37□□□□□ -1.87
ITGA6-208ENST00000469534 HSD52Q0P140 79 aa3.37□□□□□ -1.87
ITGA6-208ENST00000469534 CIRBPQ14011 172 aaKnown RBP3.37□□□□□ -1.87
ITGA6-208ENST00000469534 C14orf177Q52M58 125 aa3.37□□□□□ -1.87
ITGA6-208ENST00000469534 BVES-AS1Q5T3Y7 98 aa3.37□□□□□ -1.87
ITGA6-208ENST00000469534 Q6ZRP5 223 aa3.37□□□□□ -1.87
ITGA6-208ENST00000469534 Q6ZVH6 145 aa3.37□□□□□ -1.87
ITGA6-208ENST00000469534 CEND1Q8N111 149 aa3.37□□□□□ -1.87
ITGA6-208ENST00000469534 Q8NDZ9 215 aa3.37□□□□□ -1.87
ITGA6-208ENST00000469534 LINC00308Q8TCZ7 52 aa3.37□□□□□ -1.87
ITGA6-208ENST00000469534 RAB37Q96AX2 223 aa3.37□□□□□ -1.87
ITGA6-208ENST00000469534 NAA38Q9BRA0 125 aaKnown RBP3.37□□□□□ -1.87
ITGA6-208ENST00000469534 SND1-IT1Q9HBX3 110 aa3.37□□□□□ -1.87
ITGA6-208ENST00000469534 SACSQ9NZJ4 4579 aa3.37□□□□□ -1.87
ITGA6-208ENST00000469534 A0A096LNI7 61 aa3.36□□□□□ -1.87
ITGA6-208ENST00000469534 IGLV5-52A0A0A0MRZ9 124 aa3.36□□□□□ -1.87
ITGA6-208ENST00000469534 TRBV30A0A0K0K1B3 111 aa3.36□□□□□ -1.87
ITGA6-208ENST00000469534 A4D1N5 150 aa3.36□□□□□ -1.87
ITGA6-208ENST00000469534 PANO1I0J062 215 aa3.36□□□□□ -1.87
ITGA6-208ENST00000469534 FAM19A5Q7Z5A7 132 aaPredicted RBP3.36□□□□□ -1.87
ITGA6-208ENST00000469534 SPANXDQ9BXN6 97 aa3.36□□□□□ -1.87
ITGA6-208ENST00000469534 SNHG12Q9BXW3 62 aa3.36□□□□□ -1.87
ITGA6-208ENST00000469534 SPANXB1Q9NS25 103 aaPredicted RBP3.36□□□□□ -1.87
ITGA6-208ENST00000469534 NHP2Q9NX24 153 aaKnown RBP3.36□□□□□ -1.87
ITGA6-208ENST00000469534 SPANXCQ9NY87 97 aa3.36□□□□□ -1.87
ITGA6-208ENST00000469534 HIGD1BQ9P298 99 aa3.36□□□□□ -1.87
ITGA6-208ENST00000469534 DNAH2Q9P225 4427 aa3.35□□□□□ -1.87
ITGA6-208ENST00000469534 DNAH17Q9UFH2 4485 aa3.35□□□□□ -1.87
ITGA6-208ENST00000469534 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.35□□□□□ -1.87
ITGA6-208ENST00000469534 LOC107984640A0A0U1RRK4 108 aa3.35□□□□□ -1.87
ITGA6-208ENST00000469534 GAGE10A6NGK3 116 aa3.35□□□□□ -1.87
ITGA6-208ENST00000469534 TIMM17BO60830 172 aa3.35□□□□□ -1.87
ITGA6-208ENST00000469534 C9orf129Q5T035 196 aaKnown RBP3.35□□□□□ -1.87
ITGA6-208ENST00000469534 LCE1AQ5T7P2 110 aa3.35□□□□□ -1.87
ITGA6-208ENST00000469534 SERTAD4-AS1Q5TG53 156 aa3.35□□□□□ -1.87
ITGA6-208ENST00000469534 SFTA2Q6UW10 78 aa3.35□□□□□ -1.87
ITGA6-208ENST00000469534 RYR2Q92736 4967 aa3.35□□□□□ -1.87
ITGA6-208ENST00000469534 NDUFC2-KCTD14E9PQ53 114 aa3.34□□□□□ -1.87
ITGA6-208ENST00000469534 M0R143 59 aa3.34□□□□□ -1.87
ITGA6-208ENST00000469534 CNBPP62633 177 aaKnown RBP3.34□□□□□ -1.87
ITGA6-208ENST00000469534 TAL2Q16559 108 aa3.34□□□□□ -1.87
ITGA6-208ENST00000469534 C9orf163Q8N9P6 203 aa3.34□□□□□ -1.87
ITGA6-208ENST00000469534 OR13C6PQ8NH95 151 aa3.34□□□□□ -1.87
ITGA6-208ENST00000469534 DPH3Q96FX2 82 aa3.34□□□□□ -1.87
ITGA6-208ENST00000469534 A0A1W2PNN7 141 aa3.33□□□□□ -1.88
ITGA6-208ENST00000469534 CFC1BP0CG36 223 aa3.33□□□□□ -1.88
ITGA6-208ENST00000469534 CFC1P0CG37 223 aa3.33□□□□□ -1.88
ITGA6-208ENST00000469534 RPL13AP40429 203 aaKnown RBP3.33□□□□□ -1.88
ITGA6-208ENST00000469534 KRTAP10-1P60331 282 aa3.33□□□□□ -1.88
ITGA6-208ENST00000469534 RPL24P83731 157 aaKnown RBP3.33□□□□□ -1.88
ITGA6-208ENST00000469534 COX17Q14061 63 aa3.33□□□□□ -1.88
ITGA6-208ENST00000469534 FRAS1Q86XX4 4008 aa3.33□□□□□ -1.88
ITGA6-208ENST00000469534 IGKV2-28A0A075B6P5 120 aa3.32□□□□□ -1.88
ITGA6-208ENST00000469534 A6NDN8 102 aa3.32□□□□□ -1.88
ITGA6-208ENST00000469534 RPL37AP8A6NKH3 93 aa3.32□□□□□ -1.88
ITGA6-208ENST00000469534 F8WDY8 70 aa3.32□□□□□ -1.88
ITGA6-208ENST00000469534 IGKV2D-28P01615 120 aa3.32□□□□□ -1.88
ITGA6-208ENST00000469534 VPREB1P12018 145 aa3.32□□□□□ -1.88
ITGA6-208ENST00000469534 IFITM1P13164 125 aa3.32□□□□□ -1.88
ITGA6-208ENST00000469534 Q1RN00 199 aa3.32□□□□□ -1.88
ITGA6-208ENST00000469534 SDIM1Q6ZPB5 146 aa3.32□□□□□ -1.88
ITGA6-208ENST00000469534 PHF5AQ7RTV0 110 aaKnown RBP3.32□□□□□ -1.88
ITGA6-208ENST00000469534 KRTAP7-1Q8IUC3 87 aa3.32□□□□□ -1.88
ITGA6-208ENST00000469534 C16orf90A8MZG2 172 aa3.31□□□□□ -1.88
ITGA6-208ENST00000469534 TLX1NBP0CAT3 122 aa3.31□□□□□ -1.88
ITGA6-208ENST00000469534 S100A7L2Q5SY68 101 aa3.31□□□□□ -1.88
ITGA6-208ENST00000469534 LINC00337Q8N6G1 96 aa3.31□□□□□ -1.88
ITGA6-208ENST00000469534 NKAPP1Q8N9T2 125 aa3.31□□□□□ -1.88
ITGA6-208ENST00000469534 C7orf33Q8WU49 177 aa3.31□□□□□ -1.88
ITGA6-208ENST00000469534 A0A087WYN8 130 aa3.3□□□□□ -1.88
ITGA6-208ENST00000469534 TRBV10-3A0A0K0K1G6 114 aa3.3□□□□□ -1.88
ITGA6-208ENST00000469534 A0A1B0GVY2 172 aa3.3□□□□□ -1.88
ITGA6-208ENST00000469534 H3BUT2 72 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 118.8 ms