RNA–Protein interactions for RNA: ENST00000469129.1

SMC1A-205, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-205ENST00000469129 PRO0461Q9UI25 63 aa6.18□□□□□ -1.42
SMC1A-205ENST00000469129 STAB2Q8WWQ8 2551 aa6.17□□□□□ -1.42
SMC1A-205ENST00000469129 C9JAW5 83 aa6.17□□□□□ -1.42
SMC1A-205ENST00000469129 H0YGX0 51 aa6.17□□□□□ -1.42
SMC1A-205ENST00000469129 H3BT86 120 aa6.17□□□□□ -1.42
SMC1A-205ENST00000469129 SLC25A20O43772 301 aa6.17□□□□□ -1.42
SMC1A-205ENST00000469129 C14orf177Q52M58 125 aa6.17□□□□□ -1.42
SMC1A-205ENST00000469129 CBY1Q9Y3M2 126 aa6.17□□□□□ -1.42
SMC1A-205ENST00000469129 J3QR89 54 aa6.16□□□□□ -1.42
SMC1A-205ENST00000469129 PSCAO43653 123 aa6.16□□□□□ -1.42
SMC1A-205ENST00000469129 TRACP01848 142 aa6.16□□□□□ -1.42
SMC1A-205ENST00000469129 TLX1NBP0CAT3 122 aa6.16□□□□□ -1.42
SMC1A-205ENST00000469129 OCIAD2Q56VL3 154 aa6.16□□□□□ -1.42
SMC1A-205ENST00000469129 S100A7L2Q5SY68 101 aa6.16□□□□□ -1.42
SMC1A-205ENST00000469129 SMIM11BQ8TCY0 68 aa6.16□□□□□ -1.42
SMC1A-205ENST00000469129 CLEC2BQ92478 149 aa6.16□□□□□ -1.42
SMC1A-205ENST00000469129 NCR3O14931 201 aa6.15□□□□□ -1.42
SMC1A-205ENST00000469129 WFDC2Q14508 124 aa6.15□□□□□ -1.42
SMC1A-205ENST00000469129 TEN1Q86WV5 123 aa6.15□□□□□ -1.42
SMC1A-205ENST00000469129 MTURNQ8N3F0 131 aa6.15□□□□□ -1.42
SMC1A-205ENST00000469129 LINC01600Q96MT4 127 aa6.15□□□□□ -1.42
SMC1A-205ENST00000469129 PKIGQ9Y2B9 76 aa6.15□□□□□ -1.42
SMC1A-205ENST00000469129 NBDYA0A0U1RRE5 68 aa6.14□□□□□ -1.43
SMC1A-205ENST00000469129 A0A1B0GX51 115 aa6.14□□□□□ -1.43
SMC1A-205ENST00000469129 SNCGO76070 127 aa6.14□□□□□ -1.43
SMC1A-205ENST00000469129 DNAL4O96015 105 aa6.14□□□□□ -1.43
SMC1A-205ENST00000469129 ANKRD29Q8N6D5 301 aa6.14□□□□□ -1.43
SMC1A-205ENST00000469129 DYNC2H1Q8NCM8 4307 aaKnown RBP6.13□□□□□ -1.43
SMC1A-205ENST00000469129 RPL18AQ02543 176 aaKnown RBP6.13□□□□□ -1.43
SMC1A-205ENST00000469129 ETDBQ3ZM63 59 aa6.13□□□□□ -1.43
SMC1A-205ENST00000469129 KRTAP1-5Q9BYS1 174 aa6.13□□□□□ -1.43
SMC1A-205ENST00000469129 XAGE1AQ9HD64 81 aa6.13□□□□□ -1.43
SMC1A-205ENST00000469129 LOC107984640A0A0U1RRK4 108 aa6.12□□□□□ -1.43
SMC1A-205ENST00000469129 SMCPP49901 116 aaPredicted RBP6.12□□□□□ -1.43
SMC1A-205ENST00000469129 CASC10Q5T4H9 136 aa6.12□□□□□ -1.43
SMC1A-205ENST00000469129 PPDPFLQ8WWR9 84 aa6.12□□□□□ -1.43
SMC1A-205ENST00000469129 DNAH7Q8WXX0 4024 aa6.12□□□□□ -1.43
SMC1A-205ENST00000469129 M0R378 163 aa6.11□□□□□ -1.43
SMC1A-205ENST00000469129 IGLV6-57P01721 117 aa6.11□□□□□ -1.43
SMC1A-205ENST00000469129 VPREB1P12018 145 aa6.11□□□□□ -1.43
SMC1A-205ENST00000469129 GAGE2EQ4V326 116 aa6.11□□□□□ -1.43
SMC1A-205ENST00000469129 Q6ZRP5 223 aa6.11□□□□□ -1.43
SMC1A-205ENST00000469129 NKAPP1Q8N9T2 125 aa6.11□□□□□ -1.43
SMC1A-205ENST00000469129 GAGE2DQ9UEU5 116 aa6.11□□□□□ -1.43
SMC1A-205ENST00000469129 PLA2G2DQ9UNK4 145 aa6.11□□□□□ -1.43
SMC1A-205ENST00000469129 TRAV23DV6A0A075B6W5 121 aa6.1□□□□□ -1.43
SMC1A-205ENST00000469129 C3orf84H3BNL1 204 aa6.1□□□□□ -1.43
SMC1A-205ENST00000469129 CNBPP62633 177 aaKnown RBP6.1□□□□□ -1.43
SMC1A-205ENST00000469129 Q8NDZ9 215 aa6.1□□□□□ -1.43
SMC1A-205ENST00000469129 LECT2O14960 151 aa6.09□□□□□ -1.43
SMC1A-205ENST00000469129 PRR3P79522 188 aaKnown RBP6.09□□□□□ -1.43
SMC1A-205ENST00000469129 LCE2DQ5TA82 110 aaPredicted RBP6.09□□□□□ -1.43
SMC1A-205ENST00000469129 DIRC1Q969H9 104 aa6.09□□□□□ -1.43
SMC1A-205ENST00000469129 FAM218AQ96MZ4 157 aa6.09□□□□□ -1.43
SMC1A-205ENST00000469129 IGLV5-37A0A075B6J1 123 aa6.08□□□□□ -1.44
SMC1A-205ENST00000469129 A0A087WYN8 130 aa6.08□□□□□ -1.44
SMC1A-205ENST00000469129 TRBV7-6A0A0J9YX20 115 aa6.08□□□□□ -1.44
SMC1A-205ENST00000469129 TRBV10-3A0A0K0K1G6 114 aa6.08□□□□□ -1.44
SMC1A-205ENST00000469129 C6orf99Q4VX62 202 aa6.08□□□□□ -1.44
SMC1A-205ENST00000469129 C9orf129Q5T035 196 aaKnown RBP6.08□□□□□ -1.44
SMC1A-205ENST00000469129 SLPIP03973 132 aa6.07□□□□□ -1.44
SMC1A-205ENST00000469129 KMT2CQ8NEZ4 4911 aaKnown RBP6.07□□□□□ -1.44
SMC1A-205ENST00000469129 DNAH1Q9P2D7 4330 aa6.07□□□□□ -1.44
SMC1A-205ENST00000469129 H3BQ85 93 aa6.06□□□□□ -1.44
SMC1A-205ENST00000469129 ZNF73O43830 326 aaPredicted RBP6.06□□□□□ -1.44
SMC1A-205ENST00000469129 BAALC-AS2P0C853 105 aa6.06□□□□□ -1.44
SMC1A-205ENST00000469129 GAGE2BQ13066 116 aa6.06□□□□□ -1.44
SMC1A-205ENST00000469129 LINC00167Q96N53 147 aa6.06□□□□□ -1.44
SMC1A-205ENST00000469129 VPS25Q9BRG1 176 aa6.06□□□□□ -1.44
SMC1A-205ENST00000469129 ORMDL1Q9P0S3 153 aa6.06□□□□□ -1.44
SMC1A-205ENST00000469129 GHRHP01286 108 aa6.05□□□□□ -1.44
SMC1A-205ENST00000469129 INAFM2P0DMQ5 153 aa6.05□□□□□ -1.44
SMC1A-205ENST00000469129 COX7BP24311 80 aa6.05□□□□□ -1.44
SMC1A-205ENST00000469129 Q8N814 137 aa6.05□□□□□ -1.44
SMC1A-205ENST00000469129 STARD9Q9P2P6 4700 aa6.04□□□□□ -1.44
SMC1A-205ENST00000469129 C16orf90A8MZG2 172 aa6.04□□□□□ -1.44
SMC1A-205ENST00000469129 PRYO14603 147 aa6.04□□□□□ -1.44
SMC1A-205ENST00000469129 LINC00575Q6W349 94 aa6.04□□□□□ -1.44
SMC1A-205ENST00000469129 Q6ZRN7 208 aaPredicted RBP6.04□□□□□ -1.44
SMC1A-205ENST00000469129 hADV29S1A0JD25 119 aa6.03□□□□□ -1.44
SMC1A-205ENST00000469129 LRCOL1A6NCL2 159 aa6.03□□□□□ -1.44
SMC1A-205ENST00000469129 ELOF1P60002 83 aaKnown RBP6.03□□□□□ -1.44
SMC1A-205ENST00000469129 SERTAD4-AS1Q5TG53 156 aa6.03□□□□□ -1.44
SMC1A-205ENST00000469129 C7orf33Q8WU49 177 aa6.03□□□□□ -1.44
SMC1A-205ENST00000469129 CSMD3Q7Z407 3707 aa6.03□□□□□ -1.44
SMC1A-205ENST00000469129 SACSQ9NZJ4 4579 aa6.03□□□□□ -1.44
SMC1A-205ENST00000469129 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.02□□□□□ -1.45
SMC1A-205ENST00000469129 TEX49A0A1B0GTD5 131 aa6.02□□□□□ -1.45
SMC1A-205ENST00000469129 TMEM256-PLSCR3K7ERE1 68 aa6.02□□□□□ -1.45
SMC1A-205ENST00000469129 Q6ZR54 194 aa6.02□□□□□ -1.45
SMC1A-205ENST00000469129 KCNQ1DNQ9H478 68 aa6.02□□□□□ -1.45
SMC1A-205ENST00000469129 A0A096LNI7 61 aa6.01□□□□□ -1.45
SMC1A-205ENST00000469129 M0R2N4 97 aa6.01□□□□□ -1.45
SMC1A-205ENST00000469129 FAM19A5Q7Z5A7 132 aaPredicted RBP6.01□□□□□ -1.45
SMC1A-205ENST00000469129 MRPL55Q7Z7F7 128 aaKnown RBP6.01□□□□□ -1.45
SMC1A-205ENST00000469129 C9orf163Q8N9P6 203 aa6.01□□□□□ -1.45
SMC1A-205ENST00000469129 LINC00474Q9P2X8 69 aa6.01□□□□□ -1.45
SMC1A-205ENST00000469129 FAM240AA0A1B0GVK7 77 aa6□□□□□ -1.45
SMC1A-205ENST00000469129 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6□□□□□ -1.45
SMC1A-205ENST00000469129 LINC00476Q8WZB0 136 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms