RNA–Protein interactions for RNA: ENST00000468653.5

SMC4-209, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,756 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-209ENST00000468653 RNF151Q2KHN1 245 aa12.41□□□□□ -0.42
SMC4-209ENST00000468653 XAGE1AQ9HD64 81 aa12.41□□□□□ -0.42
SMC4-209ENST00000468653 DNAH1Q9P2D7 4330 aa12.4□□□□□ -0.42
SMC4-209ENST00000468653 TRIAP1O43715 76 aa12.39□□□□□ -0.43
SMC4-209ENST00000468653 OR13C6PQ8NH95 151 aa12.39□□□□□ -0.43
SMC4-209ENST00000468653 PRR3P79522 188 aaKnown RBP12.38□□□□□ -0.43
SMC4-209ENST00000468653 GAGE2EQ4V326 116 aa12.38□□□□□ -0.43
SMC4-209ENST00000468653 GAGE2DQ9UEU5 116 aa12.38□□□□□ -0.43
SMC4-209ENST00000468653 LY6G6CO95867 125 aa12.38□□□□□ -0.43
SMC4-209ENST00000468653 COX6CP09669 75 aa12.38□□□□□ -0.43
SMC4-209ENST00000468653 C14orf177Q52M58 125 aa12.38□□□□□ -0.43
SMC4-209ENST00000468653 Q6ZRP5 223 aa12.37□□□□□ -0.43
SMC4-209ENST00000468653 C3orf84H3BNL1 204 aa12.36□□□□□ -0.43
SMC4-209ENST00000468653 NCR3O14931 201 aa12.35□□□□□ -0.43
SMC4-209ENST00000468653 Q6ZRN7 208 aaPredicted RBP12.35□□□□□ -0.43
SMC4-209ENST00000468653 Q8NDZ9 215 aa12.35□□□□□ -0.43
SMC4-209ENST00000468653 TRBV20-1A0A075B6N2 111 aa12.35□□□□□ -0.43
SMC4-209ENST00000468653 RPL18AQ02543 176 aaKnown RBP12.35□□□□□ -0.43
SMC4-209ENST00000468653 H3BMG7 143 aa12.34□□□□□ -0.43
SMC4-209ENST00000468653 TLX1NBP0CAT3 122 aa12.34□□□□□ -0.43
SMC4-209ENST00000468653 TCL1BO95988 128 aa12.33□□□□□ -0.44
SMC4-209ENST00000468653 Q6ZR54 194 aa12.33□□□□□ -0.44
SMC4-209ENST00000468653 VPS13DQ5THJ4 4388 aa12.32□□□□□ -0.44
SMC4-209ENST00000468653 LRCOL1A6NCL2 159 aa12.32□□□□□ -0.44
SMC4-209ENST00000468653 RPL28P46779 137 aaKnown RBP12.32□□□□□ -0.44
SMC4-209ENST00000468653 SMIM11BQ8TCY0 68 aa12.32□□□□□ -0.44
SMC4-209ENST00000468653 LINC00476Q8WZB0 136 aa12.32□□□□□ -0.44
SMC4-209ENST00000468653 CNBPP62633 177 aaKnown RBP12.31□□□□□ -0.44
SMC4-209ENST00000468653 S100A7L2Q5SY68 101 aa12.31□□□□□ -0.44
SMC4-209ENST00000468653 TMEM126AQ9H061 195 aa12.31□□□□□ -0.44
SMC4-209ENST00000468653 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.3□□□□□ -0.44
SMC4-209ENST00000468653 LOC107984640A0A0U1RRK4 108 aa12.3□□□□□ -0.44
SMC4-209ENST00000468653 TRBV10-2A0A0K0K1G8 114 aa12.29□□□□□ -0.44
SMC4-209ENST00000468653 C9orf129Q5T035 196 aaKnown RBP12.29□□□□□ -0.44
SMC4-209ENST00000468653 VPREB1P12018 145 aa12.28□□□□□ -0.44
SMC4-209ENST00000468653 ATXN8Q156A1 80 aa12.28□□□□□ -0.44
SMC4-209ENST00000468653 GAGE2BQ13066 116 aa12.28□□□□□ -0.44
SMC4-209ENST00000468653 CLEC2BQ92478 149 aa12.28□□□□□ -0.44
SMC4-209ENST00000468653 C1orf134Q5TEV5 83 aa12.26□□□□□ -0.45
SMC4-209ENST00000468653 M0R378 163 aa12.24□□□□□ -0.45
SMC4-209ENST00000468653 MTURNQ8N3F0 131 aa12.24□□□□□ -0.45
SMC4-209ENST00000468653 F8W1H4 67 aa12.23□□□□□ -0.45
SMC4-209ENST00000468653 IGLV6-57P01721 117 aa12.23□□□□□ -0.45
SMC4-209ENST00000468653 Q8N814 137 aa12.23□□□□□ -0.45
SMC4-209ENST00000468653 DNAH10Q8IVF4 4471 aa12.23□□□□□ -0.45
SMC4-209ENST00000468653 A0A087WTM6 91 aa12.23□□□□□ -0.45
SMC4-209ENST00000468653 LST1O00453 97 aa12.23□□□□□ -0.45
SMC4-209ENST00000468653 NKAPP1Q8N9T2 125 aa12.23□□□□□ -0.45
SMC4-209ENST00000468653 TRBV10-3A0A0K0K1G6 114 aa12.22□□□□□ -0.45
SMC4-209ENST00000468653 PLA2G2DQ9UNK4 145 aa12.22□□□□□ -0.45
SMC4-209ENST00000468653 H0YGX0 51 aa12.21□□□□□ -0.45
SMC4-209ENST00000468653 LINC01620Q4KN68 170 aa12.21□□□□□ -0.45
SMC4-209ENST00000468653 SERTAD4-AS1Q5TG53 156 aa12.21□□□□□ -0.45
SMC4-209ENST00000468653 C9JAW5 83 aa12.2□□□□□ -0.46
SMC4-209ENST00000468653 PRO0461Q9UI25 63 aa12.2□□□□□ -0.46
SMC4-209ENST00000468653 C16orf90A8MZG2 172 aa12.19□□□□□ -0.46
SMC4-209ENST00000468653 C9orf163Q8N9P6 203 aa12.19□□□□□ -0.46
SMC4-209ENST00000468653 A0A096LNI7 61 aa12.18□□□□□ -0.46
SMC4-209ENST00000468653 FAM168BA1KXE4 195 aa12.18□□□□□ -0.46
SMC4-209ENST00000468653 C6orf99Q4VX62 202 aa12.18□□□□□ -0.46
SMC4-209ENST00000468653 TRAV23DV6A0A075B6W5 121 aa12.18□□□□□ -0.46
SMC4-209ENST00000468653 FAM218AQ96MZ4 157 aa12.18□□□□□ -0.46
SMC4-209ENST00000468653 PKIGQ9Y2B9 76 aa12.18□□□□□ -0.46
SMC4-209ENST00000468653 IGKV2-24A0A0C4DH68 120 aa12.17□□□□□ -0.46
SMC4-209ENST00000468653 CBY1Q9Y3M2 126 aa12.16□□□□□ -0.46
SMC4-209ENST00000468653 IGLV5-37A0A075B6J1 123 aa12.15□□□□□ -0.46
SMC4-209ENST00000468653 SLC25A20O43772 301 aa12.15□□□□□ -0.46
SMC4-209ENST00000468653 FAM19A5Q7Z5A7 132 aaPredicted RBP12.15□□□□□ -0.46
SMC4-209ENST00000468653 TRACP01848 142 aa12.15□□□□□ -0.46
SMC4-209ENST00000468653 C7orf33Q8WU49 177 aa12.15□□□□□ -0.46
SMC4-209ENST00000468653 SMCPP49901 116 aaPredicted RBP12.14□□□□□ -0.47
SMC4-209ENST00000468653 KMT2AQ03164 3969 aa12.14□□□□□ -0.47
SMC4-209ENST00000468653 A0A087WYN8 130 aa12.13□□□□□ -0.47
SMC4-209ENST00000468653 ZNF73O43830 326 aaPredicted RBP12.13□□□□□ -0.47
SMC4-209ENST00000468653 DIRC1Q969H9 104 aa12.13□□□□□ -0.47
SMC4-209ENST00000468653 C22orf24Q9Y442 160 aa12.13□□□□□ -0.47
SMC4-209ENST00000468653 ALMS1Q8TCU4 4167 aa12.12□□□□□ -0.47
SMC4-209ENST00000468653 SDIM1Q6ZPB5 146 aa12.12□□□□□ -0.47
SMC4-209ENST00000468653 KRTAP7-1Q8IUC3 87 aa12.12□□□□□ -0.47
SMC4-209ENST00000468653 DNAL4O96015 105 aa12.1□□□□□ -0.47
SMC4-209ENST00000468653 CHTF8P0CG12 524 aa12.1□□□□□ -0.47
SMC4-209ENST00000468653 ETDBQ3ZM63 59 aa12.1□□□□□ -0.47
SMC4-209ENST00000468653 MRPL55Q7Z7F7 128 aaKnown RBP12.1□□□□□ -0.47
SMC4-209ENST00000468653 ANKRD29Q8N6D5 301 aa12.1□□□□□ -0.47
SMC4-209ENST00000468653 RTL8CO15255 209 aa12.09□□□□□ -0.47
SMC4-209ENST00000468653 LINC00167Q96N53 147 aa12.09□□□□□ -0.47
SMC4-209ENST00000468653 DNAH6Q9C0G6 4158 aa12.08□□□□□ -0.47
SMC4-209ENST00000468653 RPL37AP8A6NKH3 93 aa12.08□□□□□ -0.48
SMC4-209ENST00000468653 TNP2Q05952 138 aa12.08□□□□□ -0.48
SMC4-209ENST00000468653 LINC00474Q9P2X8 69 aa12.08□□□□□ -0.48
SMC4-209ENST00000468653 A0A1W2PNN7 141 aa12.07□□□□□ -0.48
SMC4-209ENST00000468653 H3BT86 120 aa12.07□□□□□ -0.48
SMC4-209ENST00000468653 M0QXV9 152 aa12.07□□□□□ -0.48
SMC4-209ENST00000468653 SNCGO76070 127 aa12.07□□□□□ -0.48
SMC4-209ENST00000468653 KCNQ1DNQ9H478 68 aa12.07□□□□□ -0.48
SMC4-209ENST00000468653 A0A1B0GX51 115 aa12.07□□□□□ -0.48
SMC4-209ENST00000468653 COX7BP24311 80 aa12.07□□□□□ -0.48
SMC4-209ENST00000468653 FUSP35637 526 aaKnown RBP eCLIP12.07□□□□□ -0.48
SMC4-209ENST00000468653 IGLV1-50A0A075B6I6 118 aa12.06□□□□□ -0.48
SMC4-209ENST00000468653 LINC00575Q6W349 94 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms