RNA–Protein interactions for RNA: ENST00000468612.5

NEDD9-207, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 3

Gene NEDD9, Length 809 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-207ENST00000468612 TIMM17AQ99595 171 aa5.77□□□□□ -1.49
NEDD9-207ENST00000468612 F8W036 122 aa5.76□□□□□ -1.49
NEDD9-207ENST00000468612 PRYO14603 147 aa5.76□□□□□ -1.49
NEDD9-207ENST00000468612 CEBPGP53567 150 aa5.76□□□□□ -1.49
NEDD9-207ENST00000468612 ORMDL3Q8N138 153 aa5.76□□□□□ -1.49
NEDD9-207ENST00000468612 PRELID3AQ96N28 172 aa5.76□□□□□ -1.49
NEDD9-207ENST00000468612 SMIM7Q9BQ49 75 aa5.76□□□□□ -1.49
NEDD9-207ENST00000468612 TINCRA0A1B0GVN0 87 aa5.75□□□□□ -1.49
NEDD9-207ENST00000468612 SMIM27A0A1W2PRY6 76 aa5.75□□□□□ -1.49
NEDD9-207ENST00000468612 ERC2-IT1O76042 136 aa5.75□□□□□ -1.49
NEDD9-207ENST00000468612 MT1FP04733 61 aa5.75□□□□□ -1.49
NEDD9-207ENST00000468612 SPINK8P0C7L1 97 aa5.75□□□□□ -1.49
NEDD9-207ENST00000468612 PAPPA-AS1Q5QFB9 102 aa5.75□□□□□ -1.49
NEDD9-207ENST00000468612 TMEM136Q6ZRR5 245 aa5.75□□□□□ -1.49
NEDD9-207ENST00000468612 A0A1B0GXF2 115 aa5.74□□□□□ -1.49
NEDD9-207ENST00000468612 LIMD2Q9BT23 127 aa5.74□□□□□ -1.49
NEDD9-207ENST00000468612 KCNQ1DNQ9H478 68 aa5.74□□□□□ -1.49
NEDD9-207ENST00000468612 ERG28Q9UKR5 140 aa5.74□□□□□ -1.49
NEDD9-207ENST00000468612 ETDCA0A1B0GVM5 59 aa5.73□□□□□ -1.49
NEDD9-207ENST00000468612 COX17Q14061 63 aa5.73□□□□□ -1.49
NEDD9-207ENST00000468612 KRTAP20-1Q3LI63 56 aa5.73□□□□□ -1.49
NEDD9-207ENST00000468612 C9orf153Q5TBE3 101 aa5.73□□□□□ -1.49
NEDD9-207ENST00000468612 MRPL54Q6P161 138 aaKnown RBP5.73□□□□□ -1.49
NEDD9-207ENST00000468612 Q8N8P6 123 aa5.73□□□□□ -1.49
NEDD9-207ENST00000468612 S100A8P05109 93 aa5.72□□□□□ -1.49
NEDD9-207ENST00000468612 ORMDL2Q53FV1 153 aa5.72□□□□□ -1.49
NEDD9-207ENST00000468612 MAP1LC3AQ9H492 121 aa5.71□□□□□ -1.5
NEDD9-207ENST00000468612 B5MCH6 92 aa5.7□□□□□ -1.5
NEDD9-207ENST00000468612 BATF3Q9NR55 127 aa5.7□□□□□ -1.5
NEDD9-207ENST00000468612 LAMTOR2Q9Y2Q5 125 aa5.7□□□□□ -1.5
NEDD9-207ENST00000468612 IGLV5-39A0A0G2JS06 123 aa5.69□□□□□ -1.5
NEDD9-207ENST00000468612 Q9BRP9 147 aa5.69□□□□□ -1.5
NEDD9-207ENST00000468612 K7EMI3 77 aa5.68□□□□□ -1.5
NEDD9-207ENST00000468612 KRTAP10-10P60014 251 aa5.68□□□□□ -1.5
NEDD9-207ENST00000468612 HRCT1Q6UXD1 115 aa5.68□□□□□ -1.5
NEDD9-207ENST00000468612 TOMM6Q96B49 74 aa5.68□□□□□ -1.5
NEDD9-207ENST00000468612 MRPL18Q9H0U6 180 aaKnown RBP5.68□□□□□ -1.5
NEDD9-207ENST00000468612 TRAV9-1A0A075B6T8 112 aa5.67□□□□□ -1.5
NEDD9-207ENST00000468612 RPL23P62829 140 aaKnown RBP5.67□□□□□ -1.5
NEDD9-207ENST00000468612 ZNF625Q96I27 306 aaPredicted RBP5.67□□□□□ -1.5
NEDD9-207ENST00000468612 KIAA1644Q3SXP7 199 aa5.66□□□□□ -1.5
NEDD9-207ENST00000468612 ERASQ7Z444 233 aa5.66□□□□□ -1.5
NEDD9-207ENST00000468612 CHTOPQ9Y3Y2 248 aaKnown RBP5.66□□□□□ -1.5
NEDD9-207ENST00000468612 H3BRM9 83 aa5.65□□□□□ -1.5
NEDD9-207ENST00000468612 NCR3O14931 201 aa5.65□□□□□ -1.5
NEDD9-207ENST00000468612 ADCYAP1P18509 176 aa5.65□□□□□ -1.5
NEDD9-207ENST00000468612 CST9LQ9H4G1 147 aa5.65□□□□□ -1.5
NEDD9-207ENST00000468612 TRBV10-3A0A0K0K1G6 114 aa5.64□□□□□ -1.51
NEDD9-207ENST00000468612 C20orf202A1L168 122 aa5.64□□□□□ -1.51
NEDD9-207ENST00000468612 SRP19P09132 144 aaKnown RBP5.64□□□□□ -1.51
NEDD9-207ENST00000468612 G0S2P27469 103 aa5.64□□□□□ -1.51
NEDD9-207ENST00000468612 SCGB3A1Q96QR1 104 aa5.64□□□□□ -1.51
NEDD9-207ENST00000468612 NXT2Q9NPJ8 142 aaKnown RBP5.64□□□□□ -1.51
NEDD9-207ENST00000468612 ADIRFQ15847 76 aa5.63□□□□□ -1.51
NEDD9-207ENST00000468612 C1orf195Q5TG92 126 aa5.63□□□□□ -1.51
NEDD9-207ENST00000468612 Q6ZRX8 168 aa5.63□□□□□ -1.51
NEDD9-207ENST00000468612 ATP5L2Q7Z4Y8 100 aa5.63□□□□□ -1.51
NEDD9-207ENST00000468612 SLC51BQ86UW2 128 aa5.63□□□□□ -1.51
NEDD9-207ENST00000468612 LINC00158P58513 81 aa5.62□□□□□ -1.51
NEDD9-207ENST00000468612 BLOC1S1P78537 153 aa5.62□□□□□ -1.51
NEDD9-207ENST00000468612 SFTA2Q6UW10 78 aa5.61□□□□□ -1.51
NEDD9-207ENST00000468612 BOD1L2Q8IYS8 172 aa5.61□□□□□ -1.51
NEDD9-207ENST00000468612 PMVKQ15126 192 aa5.6□□□□□ -1.51
NEDD9-207ENST00000468612 Q5XG85 94 aa5.6□□□□□ -1.51
NEDD9-207ENST00000468612 ST20-AS1Q8NBB2 130 aa5.6□□□□□ -1.51
NEDD9-207ENST00000468612 A0A0U1RRA0 63 aa5.59□□□□□ -1.51
NEDD9-207ENST00000468612 IGLC3P0DOY3 106 aa5.59□□□□□ -1.51
NEDD9-207ENST00000468612 ZNF22P17026 224 aaPredicted RBP5.59□□□□□ -1.51
NEDD9-207ENST00000468612 CD164Q04900 197 aa5.59□□□□□ -1.51
NEDD9-207ENST00000468612 ALKAL2Q6UX46 152 aa5.59□□□□□ -1.51
NEDD9-207ENST00000468612 NAT8Q9UHE5 227 aa5.59□□□□□ -1.51
NEDD9-207ENST00000468612 S100A12P80511 92 aa5.58□□□□□ -1.52
NEDD9-207ENST00000468612 ATP11AUNQ6ZP68 121 aa5.57□□□□□ -1.52
NEDD9-207ENST00000468612 MDN1Q9NU22 5596 aa5.56□□□□□ -1.52
NEDD9-207ENST00000468612 C5orf52A6NGY3 159 aa5.56□□□□□ -1.52
NEDD9-207ENST00000468612 H7C2G1 150 aa5.56□□□□□ -1.52
NEDD9-207ENST00000468612 SPRR1BP22528 89 aa5.56□□□□□ -1.52
NEDD9-207ENST00000468612 LINC01549A6NIU2 74 aa5.55□□□□□ -1.52
NEDD9-207ENST00000468612 SMIM13P0DJ93 91 aa5.55□□□□□ -1.52
NEDD9-207ENST00000468612 DDTP30046 118 aa5.55□□□□□ -1.52
NEDD9-207ENST00000468612 Q75L30 129 aa5.55□□□□□ -1.52
NEDD9-207ENST00000468612 SMIM29Q86T20 159 aa5.55□□□□□ -1.52
NEDD9-207ENST00000468612 JOSD1Q15040 202 aaPredicted RBP5.54□□□□□ -1.52
NEDD9-207ENST00000468612 RGS21Q2M5E4 152 aa5.54□□□□□ -1.52
NEDD9-207ENST00000468612 C9JQL5 133 aa5.53□□□□□ -1.52
NEDD9-207ENST00000468612 SLC25A34Q6PIV7 304 aa5.53□□□□□ -1.52
NEDD9-207ENST00000468612 MIR7-3HGQ8N6C7 128 aa5.53□□□□□ -1.52
NEDD9-207ENST00000468612 LINC01546A6NGU7 62 aa5.52□□□□□ -1.53
NEDD9-207ENST00000468612 LGALS3P17931 250 aaKnown RBP5.52□□□□□ -1.53
NEDD9-207ENST00000468612 TRBV20-1A0A075B6N2 111 aa5.51□□□□□ -1.53
NEDD9-207ENST00000468612 TRBV10-2A0A0K0K1G8 114 aa5.51□□□□□ -1.53
NEDD9-207ENST00000468612 ATP6V1G1O75348 118 aa5.51□□□□□ -1.53
NEDD9-207ENST00000468612 Q1RN00 199 aa5.51□□□□□ -1.53
NEDD9-207ENST00000468612 FA2HQ7L5A8 372 aa5.51□□□□□ -1.53
NEDD9-207ENST00000468612 C20orf166-AS1Q96NR2 134 aa5.51□□□□□ -1.53
NEDD9-207ENST00000468612 LAMTOR3Q9UHA4 124 aa5.51□□□□□ -1.53
NEDD9-207ENST00000468612 C10orf91Q5T1B1 145 aa5.5□□□□□ -1.53
NEDD9-207ENST00000468612 PRO1933Q9H354 126 aa5.5□□□□□ -1.53
NEDD9-207ENST00000468612 C11orf86A6NJI1 115 aa5.49□□□□□ -1.53
NEDD9-207ENST00000468612 KMT2DO14686 5537 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms