RNA–Protein interactions for RNA: ENST00000468380.1

LINC00888-201, long intergenic non-protein coding RNA 888, humanhuman

TSL 2

Gene LINC00888, Length 1,241 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00888-201ENST00000468380 AKAP14Q86UN6 197 aa10.27□□□□□ -0.77
LINC00888-201ENST00000468380 MRPL18Q9H0U6 180 aaKnown RBP10.27□□□□□ -0.77
LINC00888-201ENST00000468380 IGLV5-39A0A0G2JS06 123 aa10.26□□□□□ -0.77
LINC00888-201ENST00000468380 SMCR5Q8TEV8 140 aa10.26□□□□□ -0.77
LINC00888-201ENST00000468380 ZNF625Q96I27 306 aaPredicted RBP10.26□□□□□ -0.77
LINC00888-201ENST00000468380 NDUFA12Q9UI09 145 aa10.25□□□□□ -0.77
LINC00888-201ENST00000468380 COX17Q14061 63 aa10.23□□□□□ -0.77
LINC00888-201ENST00000468380 PMVKQ15126 192 aa10.23□□□□□ -0.77
LINC00888-201ENST00000468380 KIAA1644Q3SXP7 199 aa10.23□□□□□ -0.77
LINC00888-201ENST00000468380 LINC00483Q53H64 154 aa10.23□□□□□ -0.77
LINC00888-201ENST00000468380 H3BRM9 83 aa10.22□□□□□ -0.77
LINC00888-201ENST00000468380 RPS29P62273 56 aaKnown RBP10.22□□□□□ -0.77
LINC00888-201ENST00000468380 SLC25A20O43772 301 aa10.21□□□□□ -0.77
LINC00888-201ENST00000468380 PCOTHQ58A44 107 aa10.21□□□□□ -0.77
LINC00888-201ENST00000468380 FAM19A2Q8N3H0 131 aa10.21□□□□□ -0.77
LINC00888-201ENST00000468380 MOBPQ13875 183 aa10.2□□□□□ -0.78
LINC00888-201ENST00000468380 KRTAP4-16G5E9R7 235 aaPredicted RBP10.19□□□□□ -0.78
LINC00888-201ENST00000468380 SPRR1AP35321 89 aa10.19□□□□□ -0.78
LINC00888-201ENST00000468380 GAGE2AQ6NT46 116 aa10.19□□□□□ -0.78
LINC00888-201ENST00000468380 IGLV8-61A0A075B6I0 122 aa10.18□□□□□ -0.78
LINC00888-201ENST00000468380 IGLV9-49A0A0B4J1Y8 123 aa10.18□□□□□ -0.78
LINC00888-201ENST00000468380 LINC01546A6NGU7 62 aa10.18□□□□□ -0.78
LINC00888-201ENST00000468380 KRTAP9-7A8MTY7 169 aa10.18□□□□□ -0.78
LINC00888-201ENST00000468380 IGLC3P0DOY3 106 aa10.18□□□□□ -0.78
LINC00888-201ENST00000468380 SSBP3-AS1Q7Z2R9 100 aa10.18□□□□□ -0.78
LINC00888-201ENST00000468380 ZNF22P17026 224 aaPredicted RBP10.17□□□□□ -0.78
LINC00888-201ENST00000468380 hCG_2014768A0A024R1R8 64 aa10.16□□□□□ -0.78
LINC00888-201ENST00000468380 PRYO14603 147 aa10.16□□□□□ -0.78
LINC00888-201ENST00000468380 ANAPC16Q96DE5 110 aa10.16□□□□□ -0.78
LINC00888-201ENST00000468380 ERC2-IT1O76042 136 aa10.15□□□□□ -0.78
LINC00888-201ENST00000468380 KCNQ1DNQ9H478 68 aa10.15□□□□□ -0.78
LINC00888-201ENST00000468380 LINC01549A6NIU2 74 aa10.14□□□□□ -0.79
LINC00888-201ENST00000468380 KRTAP9-1A8MXZ3 250 aaPredicted RBP10.14□□□□□ -0.79
LINC00888-201ENST00000468380 MT-ND4LP03901 98 aa10.14□□□□□ -0.79
LINC00888-201ENST00000468380 A0A0U1RRA0 63 aa10.13□□□□□ -0.79
LINC00888-201ENST00000468380 LINC00158P58513 81 aa10.13□□□□□ -0.79
LINC00888-201ENST00000468380 ETDCA0A1B0GVM5 59 aa10.11□□□□□ -0.79
LINC00888-201ENST00000468380 FLGP20930 4061 aaPredicted RBP10.11□□□□□ -0.79
LINC00888-201ENST00000468380 NCR3O14931 201 aa10.1□□□□□ -0.79
LINC00888-201ENST00000468380 NDUFA6P56556 154 aa10.1□□□□□ -0.79
LINC00888-201ENST00000468380 M0R2T5 61 aa10.09□□□□□ -0.79
LINC00888-201ENST00000468380 B5MCH6 92 aa10.08□□□□□ -0.8
LINC00888-201ENST00000468380 TRBV10-3A0A0K0K1G6 114 aa10.07□□□□□ -0.8
LINC00888-201ENST00000468380 C11orf86A6NJI1 115 aa10.07□□□□□ -0.8
LINC00888-201ENST00000468380 BOD1L2Q8IYS8 172 aa10.07□□□□□ -0.8
LINC00888-201ENST00000468380 C9orf92A6NGG3 77 aa10.06□□□□□ -0.8
LINC00888-201ENST00000468380 SFTA2Q6UW10 78 aa10.06□□□□□ -0.8
LINC00888-201ENST00000468380 Q9BRP9 147 aa10.06□□□□□ -0.8
LINC00888-201ENST00000468380 A0A096LNJ9 63 aa10.05□□□□□ -0.8
LINC00888-201ENST00000468380 SMIM13P0DJ93 91 aa10.04□□□□□ -0.8
LINC00888-201ENST00000468380 TMEM170BQ5T4T1 132 aa10.04□□□□□ -0.8
LINC00888-201ENST00000468380 FA2HQ7L5A8 372 aa10.04□□□□□ -0.8
LINC00888-201ENST00000468380 SMCO4Q9NRQ5 59 aa10.01□□□□□ -0.81
LINC00888-201ENST00000468380 C9orf153Q5TBE3 101 aa10□□□□□ -0.81
LINC00888-201ENST00000468380 BAGE3Q86Y29 109 aa10□□□□□ -0.81
LINC00888-201ENST00000468380 MIR7-3HGQ8N6C7 128 aa10□□□□□ -0.81
LINC00888-201ENST00000468380 TRAV9-1A0A075B6T8 112 aa9.99□□□□□ -0.81
LINC00888-201ENST00000468380 URB1-AS1Q96HZ7 61 aa9.99□□□□□ -0.81
LINC00888-201ENST00000468380 ATP6V1G1O75348 118 aa9.98□□□□□ -0.81
LINC00888-201ENST00000468380 Q6ZRX8 168 aa9.97□□□□□ -0.81
LINC00888-201ENST00000468380 SSPOA2VEC9 5147 aa9.96□□□□□ -0.81
LINC00888-201ENST00000468380 TMEM223A0PJW6 202 aa9.96□□□□□ -0.82
LINC00888-201ENST00000468380 PMCHL1Q16048 86 aa9.96□□□□□ -0.82
LINC00888-201ENST00000468380 COX6B2Q6YFQ2 88 aa9.95□□□□□ -0.82
LINC00888-201ENST00000468380 MEIG1Q5JSS6 88 aa9.94□□□□□ -0.82
LINC00888-201ENST00000468380 HRCT1Q6UXD1 115 aa9.94□□□□□ -0.82
LINC00888-201ENST00000468380 ST20-AS1Q8NBB2 130 aa9.94□□□□□ -0.82
LINC00888-201ENST00000468380 IGLV6-57P01721 117 aa9.93□□□□□ -0.82
LINC00888-201ENST00000468380 DDTP30046 118 aa9.93□□□□□ -0.82
LINC00888-201ENST00000468380 FABP9Q0Z7S8 132 aa9.93□□□□□ -0.82
LINC00888-201ENST00000468380 S100A12P80511 92 aa9.92□□□□□ -0.82
LINC00888-201ENST00000468380 HBDP02042 147 aa9.91□□□□□ -0.82
LINC00888-201ENST00000468380 LINC00614P0C842 121 aa9.91□□□□□ -0.82
LINC00888-201ENST00000468380 CHTOPQ9Y3Y2 248 aaKnown RBP9.91□□□□□ -0.82
LINC00888-201ENST00000468380 USH2AO75445 5202 aa9.9□□□□□ -0.82
LINC00888-201ENST00000468380 LIMD2Q9BT23 127 aa9.89□□□□□ -0.83
LINC00888-201ENST00000468380 LOC107984156A0A0G2JMH3 177 aa9.88□□□□□ -0.83
LINC00888-201ENST00000468380 TRBV10-2A0A0K0K1G8 114 aa9.88□□□□□ -0.83
LINC00888-201ENST00000468380 ARL17AQ8IVW1 177 aa9.88□□□□□ -0.83
LINC00888-201ENST00000468380 HERV-K104P63124 156 aa9.87□□□□□ -0.83
LINC00888-201ENST00000468380 C18orf32Q8TCD1 76 aa9.87□□□□□ -0.83
LINC00888-201ENST00000468380 RPL37P61927 97 aaKnown RBP9.85□□□□□ -0.83
LINC00888-201ENST00000468380 LINC00587B1AMM8 73 aa9.84□□□□□ -0.83
LINC00888-201ENST00000468380 JOSD1Q15040 202 aaPredicted RBP9.84□□□□□ -0.83
LINC00888-201ENST00000468380 COX19Q49B96 90 aa9.84□□□□□ -0.83
LINC00888-201ENST00000468380 S100PP25815 95 aa9.83□□□□□ -0.84
LINC00888-201ENST00000468380 MAP1LC3CQ9BXW4 147 aa9.82□□□□□ -0.84
LINC00888-201ENST00000468380 SEC11CQ9BY50 192 aa9.82□□□□□ -0.84
LINC00888-201ENST00000468380 MYMXA0A1B0GTQ4 84 aa9.81□□□□□ -0.84
LINC00888-201ENST00000468380 SPRR1BP22528 89 aa9.81□□□□□ -0.84
LINC00888-201ENST00000468380 SPANXB1Q9NS25 103 aaPredicted RBP9.81□□□□□ -0.84
LINC00888-201ENST00000468380 TRAV23DV6A0A075B6W5 121 aa9.8□□□□□ -0.84
LINC00888-201ENST00000468380 TRAV12-1A0A0B4J245 112 aa9.8□□□□□ -0.84
LINC00888-201ENST00000468380 C5orf52A6NGY3 159 aa9.8□□□□□ -0.84
LINC00888-201ENST00000468380 S100A7L2Q5SY68 101 aa9.8□□□□□ -0.84
LINC00888-201ENST00000468380 FCGBPQ9Y6R7 5405 aaPredicted RBP9.79□□□□□ -0.84
LINC00888-201ENST00000468380 ZNF73O43830 326 aaPredicted RBP9.79□□□□□ -0.84
LINC00888-201ENST00000468380 TSPEAR-AS2P59090 65 aa9.79□□□□□ -0.84
LINC00888-201ENST00000468380 KRTAP9-8Q9BYQ0 159 aa9.79□□□□□ -0.84
LINC00888-201ENST00000468380 RPS10P5Q9NQ39 176 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms