RNA–Protein interactions for RNA: ENST00000468179.6

COMMD3-206, Transcript of COMM domain containing 3, humanhuman

TSL 2

Gene COMMD3, Length 1,344 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-206ENST00000468179 LEPROTL1O95214 131 aa8.85□□□□□ -0.99
COMMD3-206ENST00000468179 RPL28P46779 137 aaKnown RBP8.85□□□□□ -0.99
COMMD3-206ENST00000468179 FAM19A2Q8N3H0 131 aa8.85□□□□□ -0.99
COMMD3-206ENST00000468179 LINC00167Q96N53 147 aa8.85□□□□□ -0.99
COMMD3-206ENST00000468179 IGLV1-50A0A075B6I6 118 aa8.84□□□□□ -0.99
COMMD3-206ENST00000468179 TMEM223A0PJW6 202 aa8.84□□□□□ -0.99
COMMD3-206ENST00000468179 BCE1O60756 84 aa8.84□□□□□ -0.99
COMMD3-206ENST00000468179 ZNF625Q96I27 306 aaPredicted RBP8.84□□□□□ -0.99
COMMD3-206ENST00000468179 SND1-IT1Q9HBX3 110 aa8.84□□□□□ -0.99
COMMD3-206ENST00000468179 HSPB8Q9UJY1 196 aa8.84□□□□□ -0.99
COMMD3-206ENST00000468179 GAGE10A6NGK3 116 aa8.82□□□□□ -1
COMMD3-206ENST00000468179 RPL37AP8A6NKH3 93 aa8.82□□□□□ -1
COMMD3-206ENST00000468179 COLCA2A8K830 154 aa8.82□□□□□ -1
COMMD3-206ENST00000468179 LINC00587B1AMM8 73 aa8.82□□□□□ -1
COMMD3-206ENST00000468179 ATP6V1G1O75348 118 aa8.82□□□□□ -1
COMMD3-206ENST00000468179 SERF1AO75920 110 aa8.82□□□□□ -1
COMMD3-206ENST00000468179 RPL13AP40429 203 aaKnown RBP8.82□□□□□ -1
COMMD3-206ENST00000468179 LINC00158P58513 81 aa8.82□□□□□ -1
COMMD3-206ENST00000468179 HERV-K104P63124 156 aa8.81□□□□□ -1
COMMD3-206ENST00000468179 H0Y8G0 127 aa8.8□□□□□ -1
COMMD3-206ENST00000468179 PRR26Q8N8Z3 221 aa8.8□□□□□ -1
COMMD3-206ENST00000468179 PLNP26678 52 aa8.8□□□□□ -1
COMMD3-206ENST00000468179 VPREB1P12018 145 aa8.79□□□□□ -1
COMMD3-206ENST00000468179 UBE2AP49459 152 aa8.79□□□□□ -1
COMMD3-206ENST00000468179 TMA7Q9Y2S6 64 aaKnown RBP8.79□□□□□ -1
COMMD3-206ENST00000468179 MYMXA0A1B0GTQ4 84 aa8.78□□□□□ -1
COMMD3-206ENST00000468179 KRTAP1-4P0C5Y4 121 aa8.78□□□□□ -1
COMMD3-206ENST00000468179 HERVK_113P61574 105 aa8.78□□□□□ -1
COMMD3-206ENST00000468179 MEIG1Q5JSS6 88 aa8.78□□□□□ -1
COMMD3-206ENST00000468179 MAP1LC3CQ9BXW4 147 aa8.78□□□□□ -1
COMMD3-206ENST00000468179 IGKV2-28A0A075B6P5 120 aa8.77□□□□□ -1.01
COMMD3-206ENST00000468179 DPM2O94777 84 aa8.77□□□□□ -1.01
COMMD3-206ENST00000468179 IGKV2D-28P01615 120 aa8.77□□□□□ -1.01
COMMD3-206ENST00000468179 FABP4P15090 132 aa8.77□□□□□ -1.01
COMMD3-206ENST00000468179 LINC00310P59036 64 aa8.77□□□□□ -1.01
COMMD3-206ENST00000468179 PLEKHB2Q96CS7 222 aa8.77□□□□□ -1.01
COMMD3-206ENST00000468179 NDUFA12Q9UI09 145 aa8.77□□□□□ -1.01
COMMD3-206ENST00000468179 A0A0U1RRA0 63 aa8.75□□□□□ -1.01
COMMD3-206ENST00000468179 LEPROTO15243 131 aa8.75□□□□□ -1.01
COMMD3-206ENST00000468179 SMIM13P0DJ93 91 aa8.75□□□□□ -1.01
COMMD3-206ENST00000468179 M0R378 163 aa8.74□□□□□ -1.01
COMMD3-206ENST00000468179 SCO1O75880 301 aa8.74□□□□□ -1.01
COMMD3-206ENST00000468179 IGKCP01834 107 aa8.74□□□□□ -1.01
COMMD3-206ENST00000468179 NMUP48645 174 aa8.73□□□□□ -1.01
COMMD3-206ENST00000468179 FAM19A1Q7Z5A9 133 aa8.73□□□□□ -1.01
COMMD3-206ENST00000468179 TMEM126AQ9H061 195 aa8.73□□□□□ -1.01
COMMD3-206ENST00000468179 HMCN2Q8NDA2 5059 aa8.72□□□□□ -1.01
COMMD3-206ENST00000468179 CRYGAP11844 174 aa8.72□□□□□ -1.01
COMMD3-206ENST00000468179 BOD1L2Q8IYS8 172 aa8.72□□□□□ -1.01
COMMD3-206ENST00000468179 MIR7-3HGQ8N6C7 128 aa8.72□□□□□ -1.01
COMMD3-206ENST00000468179 J3QQQ9 107 aa8.71□□□□□ -1.02
COMMD3-206ENST00000468179 LGALS3P17931 250 aaKnown RBP8.71□□□□□ -1.02
COMMD3-206ENST00000468179 KRTAP13-1Q8IUC0 172 aa8.71□□□□□ -1.02
COMMD3-206ENST00000468179 IGKV2D-26A0A0A0MRZ7 120 aa8.7□□□□□ -1.02
COMMD3-206ENST00000468179 TMEM238C9JI98 176 aa8.7□□□□□ -1.02
COMMD3-206ENST00000468179 HIST1H2BKO60814 126 aa8.7□□□□□ -1.02
COMMD3-206ENST00000468179 HIST1H2BJP06899 126 aa8.7□□□□□ -1.02
COMMD3-206ENST00000468179 HIST1H2BOP23527 126 aa8.7□□□□□ -1.02
COMMD3-206ENST00000468179 HIST1H2BBP33778 126 aa8.7□□□□□ -1.02
COMMD3-206ENST00000468179 HIST1H2BDP58876 126 aa8.7□□□□□ -1.02
COMMD3-206ENST00000468179 HIST1H2BCP62807 126 aa8.7□□□□□ -1.02
COMMD3-206ENST00000468179 S100A12P80511 92 aa8.7□□□□□ -1.02
COMMD3-206ENST00000468179 HIST2H2BEQ16778 126 aa8.7□□□□□ -1.02
COMMD3-206ENST00000468179 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.7□□□□□ -1.02
COMMD3-206ENST00000468179 HIST1H2BHQ93079 126 aa8.7□□□□□ -1.02
COMMD3-206ENST00000468179 HIST1H2BNQ99877 126 aa8.7□□□□□ -1.02
COMMD3-206ENST00000468179 HIST1H2BMQ99879 126 aa8.7□□□□□ -1.02
COMMD3-206ENST00000468179 PMCHL2Q9BQD1 86 aa8.69□□□□□ -1.02
COMMD3-206ENST00000468179 TNXBP22105 4242 aa8.69□□□□□ -1.02
COMMD3-206ENST00000468179 PRLHP81277 87 aa8.68□□□□□ -1.02
COMMD3-206ENST00000468179 Q8NDZ9 215 aa8.68□□□□□ -1.02
COMMD3-206ENST00000468179 TYMSOSQ8TAI1 123 aa8.68□□□□□ -1.02
COMMD3-206ENST00000468179 FAM229BQ4G0N7 80 aa8.67□□□□□ -1.02
COMMD3-206ENST00000468179 LCE1DQ5T752 114 aa8.67□□□□□ -1.02
COMMD3-206ENST00000468179 MIEN1Q9BRT3 115 aa8.67□□□□□ -1.02
COMMD3-206ENST00000468179 LOC107984156A0A0G2JMH3 177 aa8.66□□□□□ -1.02
COMMD3-206ENST00000468179 SYS1-DBNDD2H3BUS1 97 aa8.66□□□□□ -1.02
COMMD3-206ENST00000468179 PRYO14603 147 aa8.66□□□□□ -1.02
COMMD3-206ENST00000468179 TSPEAR-AS2P59090 65 aa8.66□□□□□ -1.02
COMMD3-206ENST00000468179 ARL17AQ8IVW1 177 aa8.66□□□□□ -1.02
COMMD3-206ENST00000468179 E9PLD3 99 aa8.65□□□□□ -1.02
COMMD3-206ENST00000468179 PET117Q6UWS5 81 aa8.65□□□□□ -1.02
COMMD3-206ENST00000468179 A0A087X002 238 aa8.64□□□□□ -1.03
COMMD3-206ENST00000468179 NCR3O14931 201 aa8.64□□□□□ -1.03
COMMD3-206ENST00000468179 KCNQ1DNQ9H478 68 aa8.64□□□□□ -1.03
COMMD3-206ENST00000468179 TRBV10-2A0A0K0K1G8 114 aa8.63□□□□□ -1.03
COMMD3-206ENST00000468179 HIGD2AQ9BW72 106 aa8.63□□□□□ -1.03
COMMD3-206ENST00000468179 ZNF706Q9Y5V0 76 aaPredicted RBP8.63□□□□□ -1.03
COMMD3-206ENST00000468179 LINC01545Q5VT33 79 aa8.62□□□□□ -1.03
COMMD3-206ENST00000468179 LINC00337Q8N6G1 96 aa8.62□□□□□ -1.03
COMMD3-206ENST00000468179 ANAPC11Q9NYG5 84 aa8.62□□□□□ -1.03
COMMD3-206ENST00000468179 ETDCA0A1B0GVM5 59 aa8.61□□□□□ -1.03
COMMD3-206ENST00000468179 NDUFC2O95298 119 aa8.61□□□□□ -1.03
COMMD3-206ENST00000468179 DAND5Q8N907 189 aa8.61□□□□□ -1.03
COMMD3-206ENST00000468179 SPANXB1Q9NS25 103 aaPredicted RBP8.61□□□□□ -1.03
COMMD3-206ENST00000468179 TRBV10-3A0A0K0K1G6 114 aa8.6□□□□□ -1.03
COMMD3-206ENST00000468179 SPRR1AP35321 89 aa8.6□□□□□ -1.03
COMMD3-206ENST00000468179 COA6Q5JTJ3 125 aaKnown RBP8.6□□□□□ -1.03
COMMD3-206ENST00000468179 A0A0J9YXY3 114 aa8.59□□□□□ -1.03
COMMD3-206ENST00000468179 DDTP30046 118 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms