RNA–Protein interactions for RNA: ENST00000467326.5

VPS50-209, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-209ENST00000467326 RICTORQ6R327 1708 aa1.66□□□□□ -2.14
VPS50-209ENST00000467326 TULP4Q9NRJ4 1543 aa1.66□□□□□ -2.14
VPS50-209ENST00000467326 MED12Q93074 2177 aa1.65□□□□□ -2.14
VPS50-209ENST00000467326 I3L3M4 83 aa1.65□□□□□ -2.15
VPS50-209ENST00000467326 M0R1W7 72 aa1.65□□□□□ -2.15
VPS50-209ENST00000467326 PIN1P1O15428 100 aa1.65□□□□□ -2.15
VPS50-209ENST00000467326 ARL14EPLP0DKL9 152 aa1.65□□□□□ -2.15
VPS50-209ENST00000467326 SPINK7P58062 85 aa1.65□□□□□ -2.15
VPS50-209ENST00000467326 ZCCHC13Q8WW36 166 aaKnown RBP1.65□□□□□ -2.15
VPS50-209ENST00000467326 TMEM167BQ9NRX6 74 aa1.65□□□□□ -2.15
VPS50-209ENST00000467326 ARFGEF1Q9Y6D6 1849 aa1.65□□□□□ -2.15
VPS50-209ENST00000467326 SAMD9LQ8IVG5 1584 aa1.64□□□□□ -2.15
VPS50-209ENST00000467326 FMN2Q9NZ56 1722 aa1.64□□□□□ -2.15
VPS50-209ENST00000467326 MDC1Q14676 2089 aaKnown RBP1.64□□□□□ -2.15
VPS50-209ENST00000467326 HAMPP81172 84 aa1.64□□□□□ -2.15
VPS50-209ENST00000467326 KRTAP13-4Q3LI77 160 aa1.64□□□□□ -2.15
VPS50-209ENST00000467326 TIMM8BQ9Y5J9 83 aaPredicted RBP1.64□□□□□ -2.15
VPS50-209ENST00000467326 NRXN3Q9Y4C0 1643 aa1.64□□□□□ -2.15
VPS50-209ENST00000467326 FN1P02751 2386 aaKnown RBP1.64□□□□□ -2.15
VPS50-209ENST00000467326 DOCK10Q96BY6 2186 aa1.64□□□□□ -2.15
VPS50-209ENST00000467326 ETDCA0A1B0GVM5 59 aa1.63□□□□□ -2.15
VPS50-209ENST00000467326 IGIPA6NJ69 53 aa1.63□□□□□ -2.15
VPS50-209ENST00000467326 SPINK4O60575 86 aa1.63□□□□□ -2.15
VPS50-209ENST00000467326 COX6B1P14854 86 aa1.63□□□□□ -2.15
VPS50-209ENST00000467326 COX7BP24311 80 aa1.63□□□□□ -2.15
VPS50-209ENST00000467326 PLAC4Q8WY50 150 aa1.63□□□□□ -2.15
VPS50-209ENST00000467326 MROH2BQ7Z745 1585 aa1.63□□□□□ -2.15
VPS50-209ENST00000467326 TNRC6BQ9UPQ9 1833 aaKnown RBP1.62□□□□□ -2.15
VPS50-209ENST00000467326 NDUFA3O95167 84 aa1.62□□□□□ -2.15
VPS50-209ENST00000467326 ESPL1Q14674 2120 aa1.62□□□□□ -2.15
VPS50-209ENST00000467326 Q6ZRX8 168 aa1.62□□□□□ -2.15
VPS50-209ENST00000467326 KCNQ1DNQ9H478 68 aa1.62□□□□□ -2.15
VPS50-209ENST00000467326 LRRC37A2A6NM11 1700 aa1.62□□□□□ -2.15
VPS50-209ENST00000467326 TIAM2Q8IVF5 1701 aa1.62□□□□□ -2.15
VPS50-209ENST00000467326 UBR3Q6ZT12 1888 aa1.62□□□□□ -2.15
VPS50-209ENST00000467326 CLTCL1P53675 1640 aa1.62□□□□□ -2.15
VPS50-209ENST00000467326 PRRC2BQ5JSZ5 2229 aaKnown RBP1.62□□□□□ -2.15
VPS50-209ENST00000467326 ABCA4P78363 2273 aa1.61□□□□□ -2.15
VPS50-209ENST00000467326 C5P01031 1676 aa1.61□□□□□ -2.15
VPS50-209ENST00000467326 FREM1Q5H8C1 2179 aa1.61□□□□□ -2.15
VPS50-209ENST00000467326 LY75O60449 1722 aa1.61□□□□□ -2.15
VPS50-209ENST00000467326 A0A096LNT2 108 aa1.61□□□□□ -2.15
VPS50-209ENST00000467326 KRTAP6-3Q3LI67 103 aa1.61□□□□□ -2.15
VPS50-209ENST00000467326 LINC00472Q9H8W2 130 aa1.61□□□□□ -2.15
VPS50-209ENST00000467326 SPTBP11277 2137 aa1.61□□□□□ -2.15
VPS50-209ENST00000467326 ZNF236Q9UL36 1845 aa1.61□□□□□ -2.15
VPS50-209ENST00000467326 PAPPA2Q9BXP8 1791 aa1.6□□□□□ -2.15
VPS50-209ENST00000467326 DEPDC5O75140 1603 aa1.6□□□□□ -2.15
VPS50-209ENST00000467326 PCDH15Q96QU1 1955 aa1.59□□□□□ -2.15
VPS50-209ENST00000467326 FBN1P35555 2871 aaKnown RBP1.59□□□□□ -2.15
VPS50-209ENST00000467326 E9PCH4 1651 aa1.59□□□□□ -2.15
VPS50-209ENST00000467326 GVQW2A0A096LPI5 108 aaPredicted RBP1.59□□□□□ -2.15
VPS50-209ENST00000467326 SPTY2D1-AS1A0A0U1RR47 76 aa1.59□□□□□ -2.15
VPS50-209ENST00000467326 TET1Q8NFU7 2136 aa1.59□□□□□ -2.15
VPS50-209ENST00000467326 QSER1Q2KHR3 1735 aa1.59□□□□□ -2.16
VPS50-209ENST00000467326 PARP4Q9UKK3 1724 aaKnown RBP1.59□□□□□ -2.16
VPS50-209ENST00000467326 MYO7BQ6PIF6 2116 aa1.58□□□□□ -2.16
VPS50-209ENST00000467326 COL4A1P02462 1669 aa1.58□□□□□ -2.16
VPS50-209ENST00000467326 ICE1Q9Y2F5 2266 aa1.58□□□□□ -2.16
VPS50-209ENST00000467326 COL14A1Q05707 1796 aaKnown RBP1.58□□□□□ -2.16
VPS50-209ENST00000467326 DEFB131BA0A096LNP1 70 aa1.58□□□□□ -2.16
VPS50-209ENST00000467326 LINC00959A0A1B0GUT2 108 aa1.58□□□□□ -2.16
VPS50-209ENST00000467326 CPSF4LA6NMK7 179 aaKnown RBP1.58□□□□□ -2.16
VPS50-209ENST00000467326 SSBP3-AS1Q7Z2R9 100 aa1.58□□□□□ -2.16
VPS50-209ENST00000467326 CRCT1Q9UGL9 99 aa1.58□□□□□ -2.16
VPS50-209ENST00000467326 BCORQ6W2J9 1755 aa1.57□□□□□ -2.16
VPS50-209ENST00000467326 SLIT1O75093 1534 aa1.57□□□□□ -2.16
VPS50-209ENST00000467326 LY6G6CO95867 125 aa1.57□□□□□ -2.16
VPS50-209ENST00000467326 RPL37P61927 97 aaKnown RBP1.57□□□□□ -2.16
VPS50-209ENST00000467326 PCOTHQ58A44 107 aa1.57□□□□□ -2.16
VPS50-209ENST00000467326 DEFB119Q8N690 84 aa1.57□□□□□ -2.16
VPS50-209ENST00000467326 KIF21BO75037 1637 aa1.57□□□□□ -2.16
VPS50-209ENST00000467326 DDX60LQ5H9U9 1706 aaKnown RBP1.57□□□□□ -2.16
VPS50-209ENST00000467326 CACNA1GO43497 2377 aa1.56□□□□□ -2.16
VPS50-209ENST00000467326 G3V318 75 aa1.56□□□□□ -2.16
VPS50-209ENST00000467326 ANKRD36A6QL64 1941 aa1.56□□□□□ -2.16
VPS50-209ENST00000467326 GCC2Q8IWJ2 1684 aa1.55□□□□□ -2.16
VPS50-209ENST00000467326 DDX60Q8IY21 1712 aaKnown RBP1.55□□□□□ -2.16
VPS50-209ENST00000467326 ANGP03950 147 aaKnown RBP1.55□□□□□ -2.16
VPS50-209ENST00000467326 SMIM2Q9BVW6 85 aa1.55□□□□□ -2.16
VPS50-209ENST00000467326 CRIPTQ9P021 101 aa1.55□□□□□ -2.16
VPS50-209ENST00000467326 IQGAP1P46940 1657 aa1.55□□□□□ -2.16
VPS50-209ENST00000467326 NRAPQ86VF7 1730 aa1.54□□□□□ -2.16
VPS50-209ENST00000467326 DOT1LQ8TEK3 1739 aa1.54□□□□□ -2.16
VPS50-209ENST00000467326 KMT2BQ9UMN6 2715 aaPredicted RBP1.54□□□□□ -2.16
VPS50-209ENST00000467326 UBE2DNLQ8IWF7 75 aa1.54□□□□□ -2.16
VPS50-209ENST00000467326 USMG5Q96IX5 58 aa1.54□□□□□ -2.16
VPS50-209ENST00000467326 KRTAP4-1Q9BYQ7 146 aa1.54□□□□□ -2.16
VPS50-209ENST00000467326 DUOX1Q9NRD9 1551 aa1.54□□□□□ -2.16
VPS50-209ENST00000467326 A0A0G2JMZ2 1700 aa1.54□□□□□ -2.16
VPS50-209ENST00000467326 LINC00158P58513 81 aa1.53□□□□□ -2.16
VPS50-209ENST00000467326 COX6B2Q6YFQ2 88 aa1.53□□□□□ -2.16
VPS50-209ENST00000467326 BAHCC1Q9P281 2608 aa1.53□□□□□ -2.16
VPS50-209ENST00000467326 LRRC37AA6NMS7 1700 aa1.52□□□□□ -2.17
VPS50-209ENST00000467326 LMO7Q8WWI1 1683 aa1.52□□□□□ -2.17
VPS50-209ENST00000467326 SSC5DA1L4H1 1573 aa1.51□□□□□ -2.17
VPS50-209ENST00000467326 OTOGLQ3ZCN5 2332 aa1.51□□□□□ -2.17
VPS50-209ENST00000467326 SDK1Q7Z5N4 2213 aa1.51□□□□□ -2.17
VPS50-209ENST00000467326 INTS1Q8N201 2190 aaKnown RBP1.51□□□□□ -2.17
VPS50-209ENST00000467326 Q8IZM0 81 aa1.51□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms