RNA–Protein interactions for RNA: ENST00000467065.1

UBXN4-205, Transcript of UBX domain protein 4, humanhuman

TSL 5

Gene UBXN4, Length 334 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-205ENST00000467065 STPG4Q8N801 248 aa4.33□□□□□ -1.72
UBXN4-205ENST00000467065 ZNF815PA8K554 130 aa4.32□□□□□ -1.72
UBXN4-205ENST00000467065 EPM2AB3EWF7 344 aa4.32□□□□□ -1.72
UBXN4-205ENST00000467065 CNBPP62633 177 aaKnown RBP4.32□□□□□ -1.72
UBXN4-205ENST00000467065 GAGE2BQ13066 116 aa4.32□□□□□ -1.72
UBXN4-205ENST00000467065 Q5VSD8 79 aa4.32□□□□□ -1.72
UBXN4-205ENST00000467065 FLG2Q5D862 2391 aaPredicted RBP4.31□□□□□ -1.72
UBXN4-205ENST00000467065 A0A1B0GV90 55 aa4.31□□□□□ -1.72
UBXN4-205ENST00000467065 TMEM238C9JI98 176 aa4.31□□□□□ -1.72
UBXN4-205ENST00000467065 SMR3BP02814 79 aaPredicted RBP4.31□□□□□ -1.72
UBXN4-205ENST00000467065 RPL24P83731 157 aaKnown RBP4.31□□□□□ -1.72
UBXN4-205ENST00000467065 SPATA45Q537H7 98 aa4.31□□□□□ -1.72
UBXN4-205ENST00000467065 C2orf82Q6UX34 121 aa4.31□□□□□ -1.72
UBXN4-205ENST00000467065 UNQ6190/PRO20217Q6UXQ8 127 aa4.31□□□□□ -1.72
UBXN4-205ENST00000467065 FAM104AQ969W3 186 aa4.31□□□□□ -1.72
UBXN4-205ENST00000467065 LINC00526Q96FQ7 95 aa4.31□□□□□ -1.72
UBXN4-205ENST00000467065 ZNF625Q96I27 306 aaPredicted RBP4.31□□□□□ -1.72
UBXN4-205ENST00000467065 UQCR10Q9UDW1 63 aa4.31□□□□□ -1.72
UBXN4-205ENST00000467065 PAM16Q9Y3D7 125 aa4.31□□□□□ -1.72
UBXN4-205ENST00000467065 CBY1Q9Y3M2 126 aa4.31□□□□□ -1.72
UBXN4-205ENST00000467065 MYCBP2O75592 4640 aa4.31□□□□□ -1.72
UBXN4-205ENST00000467065 SRRM2Q9UQ35 2752 aaKnown RBP4.31□□□□□ -1.72
UBXN4-205ENST00000467065 IGLV5-39A0A0G2JS06 123 aa4.3□□□□□ -1.72
UBXN4-205ENST00000467065 NDUFC2-KCTD14E9PQ53 114 aa4.3□□□□□ -1.72
UBXN4-205ENST00000467065 MAJINQ3KP22 176 aa4.3□□□□□ -1.72
UBXN4-205ENST00000467065 LINC01620Q4KN68 170 aa4.3□□□□□ -1.72
UBXN4-205ENST00000467065 GAGE2EQ4V326 116 aa4.3□□□□□ -1.72
UBXN4-205ENST00000467065 COL5A1-AS1Q5SY13 56 aa4.3□□□□□ -1.72
UBXN4-205ENST00000467065 KRTAP26-1Q6PEX3 210 aa4.3□□□□□ -1.72
UBXN4-205ENST00000467065 SLC25A34Q6PIV7 304 aa4.3□□□□□ -1.72
UBXN4-205ENST00000467065 Q6ZRU5 148 aa4.3□□□□□ -1.72
UBXN4-205ENST00000467065 C15orf56Q8N910 161 aa4.3□□□□□ -1.72
UBXN4-205ENST00000467065 C9orf163Q8N9P6 203 aa4.3□□□□□ -1.72
UBXN4-205ENST00000467065 SNHG12Q9BXW3 62 aa4.3□□□□□ -1.72
UBXN4-205ENST00000467065 PRO1933Q9H354 126 aa4.3□□□□□ -1.72
UBXN4-205ENST00000467065 FAM30AQ9NZY2 134 aa4.3□□□□□ -1.72
UBXN4-205ENST00000467065 GAGE2DQ9UEU5 116 aa4.3□□□□□ -1.72
UBXN4-205ENST00000467065 ERG28Q9UKR5 140 aa4.3□□□□□ -1.72
UBXN4-205ENST00000467065 HERC1Q15751 4861 aa4.29□□□□□ -1.72
UBXN4-205ENST00000467065 DMBT1Q9UGM3 2413 aaPredicted RBP4.29□□□□□ -1.72
UBXN4-205ENST00000467065 IGKV2-24A0A0C4DH68 120 aa4.29□□□□□ -1.72
UBXN4-205ENST00000467065 A0A0U1RRA0 63 aa4.29□□□□□ -1.72
UBXN4-205ENST00000467065 DLEU1O43261 78 aa4.29□□□□□ -1.72
UBXN4-205ENST00000467065 Q6ZVH6 145 aa4.29□□□□□ -1.72
UBXN4-205ENST00000467065 NKAPP1Q8N9T2 125 aa4.29□□□□□ -1.72
UBXN4-205ENST00000467065 INAFM2P0DMQ5 153 aa4.28□□□□□ -1.72
UBXN4-205ENST00000467065 C7orf33Q8WU49 177 aa4.28□□□□□ -1.72
UBXN4-205ENST00000467065 HIST1H4GQ99525 98 aa4.28□□□□□ -1.72
UBXN4-205ENST00000467065 TMEM238LA0A1B0GVL6 79 aa4.27□□□□□ -1.73
UBXN4-205ENST00000467065 SMIM13P0DJ93 91 aa4.27□□□□□ -1.73
UBXN4-205ENST00000467065 IFITM1P13164 125 aa4.27□□□□□ -1.73
UBXN4-205ENST00000467065 HINT1P49773 126 aaPredicted RBP4.27□□□□□ -1.73
UBXN4-205ENST00000467065 KIAA0087Q14695 138 aa4.27□□□□□ -1.73
UBXN4-205ENST00000467065 S100A7L2Q5SY68 101 aa4.27□□□□□ -1.73
UBXN4-205ENST00000467065 BOD1L2Q8IYS8 172 aa4.27□□□□□ -1.73
UBXN4-205ENST00000467065 A0A0J9YXY3 114 aa4.26□□□□□ -1.73
UBXN4-205ENST00000467065 TIMM17BO60830 172 aa4.26□□□□□ -1.73
UBXN4-205ENST00000467065 SNCGO76070 127 aa4.26□□□□□ -1.73
UBXN4-205ENST00000467065 TLX1NBP0CAT3 122 aa4.26□□□□□ -1.73
UBXN4-205ENST00000467065 COX8AP10176 69 aa4.26□□□□□ -1.73
UBXN4-205ENST00000467065 PTTG1IPP53801 180 aa4.26□□□□□ -1.73
UBXN4-205ENST00000467065 UBE2BP63146 152 aa4.26□□□□□ -1.73
UBXN4-205ENST00000467065 Q6ZSA8 131 aa4.26□□□□□ -1.73
UBXN4-205ENST00000467065 MIR7-3HGQ8N6C7 128 aa4.26□□□□□ -1.73
UBXN4-205ENST00000467065 C6orf48Q9UBA6 75 aa4.26□□□□□ -1.73
UBXN4-205ENST00000467065 ANKRD39Q53RE8 183 aa4.25□□□□□ -1.73
UBXN4-205ENST00000467065 C9orf116Q5BN46 136 aaPredicted RBP4.25□□□□□ -1.73
UBXN4-205ENST00000467065 C10orf25Q5T742 122 aa4.25□□□□□ -1.73
UBXN4-205ENST00000467065 SDIM1Q6ZPB5 146 aa4.25□□□□□ -1.73
UBXN4-205ENST00000467065 SCXQ7RTU7 201 aa4.25□□□□□ -1.73
UBXN4-205ENST00000467065 OR13C6PQ8NH95 151 aa4.25□□□□□ -1.73
UBXN4-205ENST00000467065 HNRNPA3P51991 378 aaKnown RBP4.24□□□□□ -1.73
UBXN4-205ENST00000467065 Q6ZRP5 223 aa4.24□□□□□ -1.73
UBXN4-205ENST00000467065 PCP2Q8IVA1 136 aa4.24□□□□□ -1.73
UBXN4-205ENST00000467065 SND1-IT1Q9HBX3 110 aa4.24□□□□□ -1.73
UBXN4-205ENST00000467065 XAGE1AQ9HD64 81 aa4.24□□□□□ -1.73
UBXN4-205ENST00000467065 IGKV2D-26A0A0A0MRZ7 120 aa4.23□□□□□ -1.73
UBXN4-205ENST00000467065 A6NDN8 102 aa4.23□□□□□ -1.73
UBXN4-205ENST00000467065 SLPIP03973 132 aa4.23□□□□□ -1.73
UBXN4-205ENST00000467065 NPC2P61916 151 aa4.23□□□□□ -1.73
UBXN4-205ENST00000467065 VAMP3Q15836 100 aa4.23□□□□□ -1.73
UBXN4-205ENST00000467065 FAM19A5Q7Z5A7 132 aaPredicted RBP4.23□□□□□ -1.73
UBXN4-205ENST00000467065 RAB37Q96AX2 223 aa4.23□□□□□ -1.73
UBXN4-205ENST00000467065 PKHD1L1Q86WI1 4243 aa4.23□□□□□ -1.73
UBXN4-205ENST00000467065 A0A096LNI7 61 aa4.22□□□□□ -1.73
UBXN4-205ENST00000467065 TRAV13-2A0A0B4J235 113 aa4.22□□□□□ -1.73
UBXN4-205ENST00000467065 M0R378 163 aa4.22□□□□□ -1.73
UBXN4-205ENST00000467065 PLA2G1BP04054 148 aaKnown RBP4.22□□□□□ -1.73
UBXN4-205ENST00000467065 TSPEAR-AS2P59090 65 aa4.22□□□□□ -1.73
UBXN4-205ENST00000467065 TAL2Q16559 108 aa4.22□□□□□ -1.73
UBXN4-205ENST00000467065 CIRBP-AS1Q8TBR5 109 aa4.22□□□□□ -1.73
UBXN4-205ENST00000467065 SPANXDQ9BXN6 97 aa4.22□□□□□ -1.73
UBXN4-205ENST00000467065 SPANXCQ9NY87 97 aa4.22□□□□□ -1.73
UBXN4-205ENST00000467065 HIGD1BQ9P298 99 aa4.22□□□□□ -1.73
UBXN4-205ENST00000467065 A0A087WYN8 130 aa4.21□□□□□ -1.74
UBXN4-205ENST00000467065 M0QXV9 152 aa4.21□□□□□ -1.74
UBXN4-205ENST00000467065 NDUFC2O95298 119 aa4.21□□□□□ -1.74
UBXN4-205ENST00000467065 UBE2V1Q13404 147 aa4.21□□□□□ -1.74
UBXN4-205ENST00000467065 MRPL55Q7Z7F7 128 aaKnown RBP4.21□□□□□ -1.74
UBXN4-205ENST00000467065 MUSTN1Q8IVN3 82 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms