RNA–Protein interactions for RNA: ENST00000466854.5

CCDC58-203, Transcript of coiled-coil domain containing 58, humanhuman

TSL 3

Gene CCDC58, Length 769 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-203ENST00000466854 F2Z2F3 143 aa1.98□□□□□ -2.09
CCDC58-203ENST00000466854 IGLV7-43P04211 117 aa1.98□□□□□ -2.09
CCDC58-203ENST00000466854 CISD3P0C7P0 127 aa1.98□□□□□ -2.09
CCDC58-203ENST00000466854 MGST1P10620 155 aaKnown RBP1.98□□□□□ -2.09
CCDC58-203ENST00000466854 MOBPQ13875 183 aa1.98□□□□□ -2.09
CCDC58-203ENST00000466854 PMCHL1Q16048 86 aa1.98□□□□□ -2.09
CCDC58-203ENST00000466854 LY6EQ16553 131 aa1.98□□□□□ -2.09
CCDC58-203ENST00000466854 KRTAP25-1Q3LHN0 102 aa1.98□□□□□ -2.09
CCDC58-203ENST00000466854 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.98□□□□□ -2.09
CCDC58-203ENST00000466854 CASC2Q6XLA1 102 aa1.98□□□□□ -2.09
CCDC58-203ENST00000466854 FAM223AQ8IWN6 122 aa1.98□□□□□ -2.09
CCDC58-203ENST00000466854 CYP4F30PQ9H0H9 118 aa1.98□□□□□ -2.09
CCDC58-203ENST00000466854 FREM1Q5H8C1 2179 aa1.98□□□□□ -2.09
CCDC58-203ENST00000466854 HEATR1Q9H583 2144 aaKnown RBP1.97□□□□□ -2.09
CCDC58-203ENST00000466854 RYR1P21817 5038 aa1.97□□□□□ -2.09
CCDC58-203ENST00000466854 COL7A1Q02388 2944 aa1.97□□□□□ -2.09
CCDC58-203ENST00000466854 CRYM-AS1A6NIL9 109 aa1.97□□□□□ -2.09
CCDC58-203ENST00000466854 NDUFC1O43677 76 aa1.97□□□□□ -2.09
CCDC58-203ENST00000466854 MIR22HGQ0VDD5 57 aa1.97□□□□□ -2.09
CCDC58-203ENST00000466854 KPRPQ5T749 579 aaPredicted RBP1.97□□□□□ -2.09
CCDC58-203ENST00000466854 CYP2G1PQ6ZSU1 146 aa1.97□□□□□ -2.09
CCDC58-203ENST00000466854 C9orf163Q8N9P6 203 aa1.97□□□□□ -2.09
CCDC58-203ENST00000466854 FAM167A-AS1Q96KT0 104 aa1.97□□□□□ -2.09
CCDC58-203ENST00000466854 MED12Q93074 2177 aa1.97□□□□□ -2.09
CCDC58-203ENST00000466854 HYDINQ4G0P3 5121 aa1.97□□□□□ -2.09
CCDC58-203ENST00000466854 PCLOQ9Y6V0 5065 aa1.96□□□□□ -2.09
CCDC58-203ENST00000466854 ARFGEF3Q5TH69 2177 aa1.96□□□□□ -2.1
CCDC58-203ENST00000466854 IGHV3OR16-8A0A075B7F1 116 aa1.96□□□□□ -2.1
CCDC58-203ENST00000466854 TRAV22A0A0B4J277 110 aa1.96□□□□□ -2.1
CCDC58-203ENST00000466854 A0A0G2JND7 137 aa1.96□□□□□ -2.1
CCDC58-203ENST00000466854 SPRR5A0A1B0GTR4 108 aa1.96□□□□□ -2.1
CCDC58-203ENST00000466854 BCE1O60756 84 aa1.96□□□□□ -2.1
CCDC58-203ENST00000466854 IGKV1-17P01599 117 aa1.96□□□□□ -2.1
CCDC58-203ENST00000466854 SFTA3P0C7M3 94 aa1.96□□□□□ -2.1
CCDC58-203ENST00000466854 PRB4P10163 310 aaPredicted RBP1.96□□□□□ -2.1
CCDC58-203ENST00000466854 SNRPFP62306 86 aaKnown RBP1.96□□□□□ -2.1
CCDC58-203ENST00000466854 ZNF833PQ6ZTB9 187 aa1.96□□□□□ -2.1
CCDC58-203ENST00000466854 FDCSPQ8NFU4 85 aa1.96□□□□□ -2.1
CCDC58-203ENST00000466854 LYSTQ99698 3801 aa1.96□□□□□ -2.1
CCDC58-203ENST00000466854 DNAJC13O75165 2243 aa1.96□□□□□ -2.1
CCDC58-203ENST00000466854 SPTBP11277 2137 aa1.96□□□□□ -2.1
CCDC58-203ENST00000466854 TENM2Q9NT68 2774 aa1.95□□□□□ -2.1
CCDC58-203ENST00000466854 IGHV3-64A0A075B6Q5 118 aa1.95□□□□□ -2.1
CCDC58-203ENST00000466854 TRAV10A0A0B4J240 114 aa1.95□□□□□ -2.1
CCDC58-203ENST00000466854 A0A0D9SFI3 127 aa1.95□□□□□ -2.1
CCDC58-203ENST00000466854 SPTY2D1-AS1A0A0U1RR47 76 aa1.95□□□□□ -2.1
CCDC58-203ENST00000466854 KANTRA0A1W2PQU2 76 aa1.95□□□□□ -2.1
CCDC58-203ENST00000466854 CLPSL1A2RUU4 121 aa1.95□□□□□ -2.1
CCDC58-203ENST00000466854 UMAD1C9J7I0 102 aa1.95□□□□□ -2.1
CCDC58-203ENST00000466854 TFF1P04155 84 aa1.95□□□□□ -2.1
CCDC58-203ENST00000466854 BAALC-AS2P0C853 105 aa1.95□□□□□ -2.1
CCDC58-203ENST00000466854 DEFB121Q5J5C9 76 aa1.95□□□□□ -2.1
CCDC58-203ENST00000466854 IGFL1Q6UW32 110 aa1.95□□□□□ -2.1
CCDC58-203ENST00000466854 LINC00643Q86TS7 51 aa1.95□□□□□ -2.1
CCDC58-203ENST00000466854 SPTSSBQ8NFR3 76 aa1.95□□□□□ -2.1
CCDC58-203ENST00000466854 LHFPL6Q9Y693 200 aa1.95□□□□□ -2.1
CCDC58-203ENST00000466854 DYNC2H1Q8NCM8 4307 aaKnown RBP1.95□□□□□ -2.1
CCDC58-203ENST00000466854 CSMD3Q7Z407 3707 aa1.94□□□□□ -2.1
CCDC58-203ENST00000466854 ROS1P08922 2347 aa1.94□□□□□ -2.1
CCDC58-203ENST00000466854 TRBV7-3A0A075B6L6 115 aa1.94□□□□□ -2.1
CCDC58-203ENST00000466854 TEX49A0A1B0GTD5 131 aa1.94□□□□□ -2.1
CCDC58-203ENST00000466854 SPANXN5Q5MJ07 72 aa1.94□□□□□ -2.1
CCDC58-203ENST00000466854 Q8N6K4 173 aa1.94□□□□□ -2.1
CCDC58-203ENST00000466854 CMTM2Q8TAZ6 248 aa1.94□□□□□ -2.1
CCDC58-203ENST00000466854 C22orf24Q9Y442 160 aa1.94□□□□□ -2.1
CCDC58-203ENST00000466854 TRAV12-1A0A0B4J245 112 aa1.93□□□□□ -2.1
CCDC58-203ENST00000466854 UBE2D1P51668 147 aa1.93□□□□□ -2.1
CCDC58-203ENST00000466854 TFF3Q07654 80 aa1.93□□□□□ -2.1
CCDC58-203ENST00000466854 TMEM170BQ5T4T1 132 aa1.93□□□□□ -2.1
CCDC58-203ENST00000466854 LYPD1Q8N2G4 141 aa1.93□□□□□ -2.1
CCDC58-203ENST00000466854 TIMM21Q9BVV7 248 aa1.93□□□□□ -2.1
CCDC58-203ENST00000466854 FRAS1Q86XX4 4008 aa1.93□□□□□ -2.1
CCDC58-203ENST00000466854 HERC2O95714 4834 aa1.92□□□□□ -2.1
CCDC58-203ENST00000466854 RYR2Q92736 4967 aa1.92□□□□□ -2.1
CCDC58-203ENST00000466854 PIGBOS1A0A0B4J2F0 54 aa1.92□□□□□ -2.1
CCDC58-203ENST00000466854 A0A0J9YX75 114 aa1.92□□□□□ -2.1
CCDC58-203ENST00000466854 SDHAF1A6NFY7 115 aa1.92□□□□□ -2.1
CCDC58-203ENST00000466854 HCRTO43612 131 aa1.92□□□□□ -2.1
CCDC58-203ENST00000466854 ERC2-IT1O76042 136 aa1.92□□□□□ -2.1
CCDC58-203ENST00000466854 ACYP1P07311 99 aa1.92□□□□□ -2.1
CCDC58-203ENST00000466854 SMIM13P0DJ93 91 aa1.92□□□□□ -2.1
CCDC58-203ENST00000466854 IFI27L1Q96BM0 104 aa1.92□□□□□ -2.1
CCDC58-203ENST00000466854 PROK2Q9HC23 129 aa1.92□□□□□ -2.1
CCDC58-203ENST00000466854 MANBALQ9NQG1 85 aa1.92□□□□□ -2.1
CCDC58-203ENST00000466854 CDC42SE2Q9NRR3 84 aa1.92□□□□□ -2.1
CCDC58-203ENST00000466854 PRO2289Q9P1D8 64 aa1.92□□□□□ -2.1
CCDC58-203ENST00000466854 PRO1854Q9UHT4 67 aa1.92□□□□□ -2.1
CCDC58-203ENST00000466854 CADP27708 2225 aa1.91□□□□□ -2.1
CCDC58-203ENST00000466854 DNAH1Q9P2D7 4330 aa1.91□□□□□ -2.1
CCDC58-203ENST00000466854 TRBV25-1A0A075B6N4 114 aa1.91□□□□□ -2.1
CCDC58-203ENST00000466854 TMSB15BA0A087X1C1 80 aa1.91□□□□□ -2.1
CCDC58-203ENST00000466854 TRAV12-3A0A0B4J271 114 aa1.91□□□□□ -2.1
CCDC58-203ENST00000466854 LOC101927531A0A1B0GV80 90 aa1.91□□□□□ -2.1
CCDC58-203ENST00000466854 C2orf70A6NJV1 201 aa1.91□□□□□ -2.1
CCDC58-203ENST00000466854 FAM223BA6NKX1 122 aa1.91□□□□□ -2.1
CCDC58-203ENST00000466854 COX8AP10176 69 aa1.91□□□□□ -2.1
CCDC58-203ENST00000466854 RPL7L1Q6DKI1 246 aaKnown RBP1.91□□□□□ -2.1
CCDC58-203ENST00000466854 XAF1Q6GPH4 301 aa1.91□□□□□ -2.1
CCDC58-203ENST00000466854 ZNF818PQ6ZRF7 136 aa1.91□□□□□ -2.1
CCDC58-203ENST00000466854 TMEM254Q8TBM7 123 aa1.91□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 84.2 ms