RNA–Protein interactions for RNA: ENST00000466285.1

COL6A1-203, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 3

Gene COL6A1, Length 500 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-203ENST00000466285 LINC01549A6NIU2 74 aa11.95□□□□□ -0.5
COL6A1-203ENST00000466285 TMEM238C9JI98 176 aa11.94□□□□□ -0.5
COL6A1-203ENST00000466285 UBE2AP49459 152 aa11.94□□□□□ -0.5
COL6A1-203ENST00000466285 NKAPP1Q8N9T2 125 aa11.93□□□□□ -0.5
COL6A1-203ENST00000466285 SERF1AO75920 110 aa11.92□□□□□ -0.5
COL6A1-203ENST00000466285 HBDP02042 147 aa11.92□□□□□ -0.5
COL6A1-203ENST00000466285 VPREB1P12018 145 aa11.92□□□□□ -0.5
COL6A1-203ENST00000466285 PFN2P35080 140 aa11.92□□□□□ -0.5
COL6A1-203ENST00000466285 COA6Q5JTJ3 125 aaKnown RBP11.92□□□□□ -0.5
COL6A1-203ENST00000466285 BAGE3Q86Y29 109 aa11.92□□□□□ -0.5
COL6A1-203ENST00000466285 PMVKQ15126 192 aa11.91□□□□□ -0.5
COL6A1-203ENST00000466285 LINC00304Q8N9R0 145 aa11.91□□□□□ -0.5
COL6A1-203ENST00000466285 IGLV5-39A0A0G2JS06 123 aa11.9□□□□□ -0.5
COL6A1-203ENST00000466285 IGLC3P0DOY3 106 aa11.89□□□□□ -0.51
COL6A1-203ENST00000466285 ZNF22P17026 224 aaPredicted RBP11.89□□□□□ -0.51
COL6A1-203ENST00000466285 PMCHL1Q16048 86 aa11.89□□□□□ -0.51
COL6A1-203ENST00000466285 SND1-IT1Q9HBX3 110 aa11.89□□□□□ -0.51
COL6A1-203ENST00000466285 FAM229BQ4G0N7 80 aa11.88□□□□□ -0.51
COL6A1-203ENST00000466285 C3orf22Q8N5N4 141 aa11.88□□□□□ -0.51
COL6A1-203ENST00000466285 TMEM126AQ9H061 195 aa11.88□□□□□ -0.51
COL6A1-203ENST00000466285 M0R378 163 aa11.87□□□□□ -0.51
COL6A1-203ENST00000466285 ATP5LO75964 103 aa11.87□□□□□ -0.51
COL6A1-203ENST00000466285 FAM19A1Q7Z5A9 133 aa11.87□□□□□ -0.51
COL6A1-203ENST00000466285 HSBP1O75506 76 aa11.86□□□□□ -0.51
COL6A1-203ENST00000466285 ZNF625Q96I27 306 aaPredicted RBP11.86□□□□□ -0.51
COL6A1-203ENST00000466285 A0A0U1RQV1 116 aa11.85□□□□□ -0.51
COL6A1-203ENST00000466285 ERG28Q9UKR5 140 aa11.85□□□□□ -0.51
COL6A1-203ENST00000466285 FAM19A2Q8N3H0 131 aa11.84□□□□□ -0.51
COL6A1-203ENST00000466285 H3BRM9 83 aa11.83□□□□□ -0.52
COL6A1-203ENST00000466285 NDUFA6P56556 154 aa11.82□□□□□ -0.52
COL6A1-203ENST00000466285 IGKV2D-26A0A0A0MRZ7 120 aa11.81□□□□□ -0.52
COL6A1-203ENST00000466285 C11orf86A6NJI1 115 aa11.81□□□□□ -0.52
COL6A1-203ENST00000466285 TPRXLQ17RH7 258 aa11.81□□□□□ -0.52
COL6A1-203ENST00000466285 PLEKHB2Q96CS7 222 aa11.81□□□□□ -0.52
COL6A1-203ENST00000466285 IGLV7-46A0A075B6I9 117 aa11.8□□□□□ -0.52
COL6A1-203ENST00000466285 IFI27L1Q96BM0 104 aa11.79□□□□□ -0.52
COL6A1-203ENST00000466285 CDIP1Q9H305 208 aa11.79□□□□□ -0.52
COL6A1-203ENST00000466285 TRAV12-1A0A0B4J245 112 aa11.77□□□□□ -0.53
COL6A1-203ENST00000466285 LEPROTL1O95214 131 aa11.77□□□□□ -0.53
COL6A1-203ENST00000466285 HIGD2AQ9BW72 106 aa11.76□□□□□ -0.53
COL6A1-203ENST00000466285 A0A0U1RRA0 63 aa11.75□□□□□ -0.53
COL6A1-203ENST00000466285 SPRR4Q96PI1 79 aa11.74□□□□□ -0.53
COL6A1-203ENST00000466285 HSPB8Q9UJY1 196 aa11.74□□□□□ -0.53
COL6A1-203ENST00000466285 PPDPFQ9H3Y8 114 aa11.73□□□□□ -0.53
COL6A1-203ENST00000466285 RPL24P83731 157 aaKnown RBP11.72□□□□□ -0.53
COL6A1-203ENST00000466285 COX17Q14061 63 aa11.72□□□□□ -0.53
COL6A1-203ENST00000466285 TMEM170BQ5T4T1 132 aa11.72□□□□□ -0.53
COL6A1-203ENST00000466285 HIST3H2BBQ8N257 126 aa11.72□□□□□ -0.53
COL6A1-203ENST00000466285 DAND5Q8N907 189 aa11.71□□□□□ -0.53
COL6A1-203ENST00000466285 FABP4P15090 132 aa11.7□□□□□ -0.54
COL6A1-203ENST00000466285 C5orf52A6NGY3 159 aa11.69□□□□□ -0.54
COL6A1-203ENST00000466285 LINC00158P58513 81 aa11.68□□□□□ -0.54
COL6A1-203ENST00000466285 CHTOPQ9Y3Y2 248 aaKnown RBP11.68□□□□□ -0.54
COL6A1-203ENST00000466285 NCR3O14931 201 aa11.67□□□□□ -0.54
COL6A1-203ENST00000466285 KRTAP4-1Q9BYQ7 146 aa11.67□□□□□ -0.54
COL6A1-203ENST00000466285 SYS1-DBNDD2H3BUS1 97 aa11.66□□□□□ -0.54
COL6A1-203ENST00000466285 SMIM13P0DJ93 91 aa11.66□□□□□ -0.54
COL6A1-203ENST00000466285 HIST1H2BLQ99880 126 aa11.66□□□□□ -0.54
COL6A1-203ENST00000466285 MAP1LC3CQ9BXW4 147 aa11.66□□□□□ -0.54
COL6A1-203ENST00000466285 TMEM223A0PJW6 202 aa11.65□□□□□ -0.54
COL6A1-203ENST00000466285 Q8NBF4 154 aa11.65□□□□□ -0.54
COL6A1-203ENST00000466285 KRTAP9-6A0A140TA67 174 aa11.64□□□□□ -0.55
COL6A1-203ENST00000466285 S100A6P06703 90 aa11.64□□□□□ -0.55
COL6A1-203ENST00000466285 C3orf79P0CE67 100 aa11.64□□□□□ -0.55
COL6A1-203ENST00000466285 SNRPEP62304 92 aaKnown RBP11.64□□□□□ -0.55
COL6A1-203ENST00000466285 KRTAP13-3Q3SY46 172 aa11.64□□□□□ -0.55
COL6A1-203ENST00000466285 LINC01545Q5VT33 79 aa11.64□□□□□ -0.55
COL6A1-203ENST00000466285 KRTAP4-16G5E9R7 235 aaPredicted RBP11.63□□□□□ -0.55
COL6A1-203ENST00000466285 PET117Q6UWS5 81 aa11.63□□□□□ -0.55
COL6A1-203ENST00000466285 SPRR1AP35321 89 aa11.62□□□□□ -0.55
COL6A1-203ENST00000466285 SMCR5Q8TEV8 140 aa11.62□□□□□ -0.55
COL6A1-203ENST00000466285 PRYO14603 147 aa11.61□□□□□ -0.55
COL6A1-203ENST00000466285 CTAG1AP78358 180 aa11.61□□□□□ -0.55
COL6A1-203ENST00000466285 BOD1L2Q8IYS8 172 aa11.61□□□□□ -0.55
COL6A1-203ENST00000466285 PLNP26678 52 aa11.6□□□□□ -0.55
COL6A1-203ENST00000466285 MIR7-3HGQ8N6C7 128 aa11.6□□□□□ -0.55
COL6A1-203ENST00000466285 H0Y8G0 127 aa11.59□□□□□ -0.55
COL6A1-203ENST00000466285 SPAG11AQ6PDA7 123 aa11.59□□□□□ -0.55
COL6A1-203ENST00000466285 SFTA2Q6UW10 78 aa11.59□□□□□ -0.55
COL6A1-203ENST00000466285 TRBV10-3A0A0K0K1G6 114 aa11.58□□□□□ -0.56
COL6A1-203ENST00000466285 DPM2O94777 84 aa11.58□□□□□ -0.56
COL6A1-203ENST00000466285 S100A2P29034 98 aa11.58□□□□□ -0.56
COL6A1-203ENST00000466285 TSPEAR-AS2P59090 65 aa11.58□□□□□ -0.56
COL6A1-203ENST00000466285 FP248Q71RG6 208 aaPredicted RBP11.58□□□□□ -0.56
COL6A1-203ENST00000466285 ERC2-IT1O76042 136 aa11.57□□□□□ -0.56
COL6A1-203ENST00000466285 LINC00337Q8N6G1 96 aa11.57□□□□□ -0.56
COL6A1-203ENST00000466285 PMCHL2Q9BQD1 86 aa11.57□□□□□ -0.56
COL6A1-203ENST00000466285 KCNQ1DNQ9H478 68 aa11.57□□□□□ -0.56
COL6A1-203ENST00000466285 IGKCP01834 107 aa11.56□□□□□ -0.56
COL6A1-203ENST00000466285 KRTDAPP60985 99 aa11.56□□□□□ -0.56
COL6A1-203ENST00000466285 MEIG1Q5JSS6 88 aa11.56□□□□□ -0.56
COL6A1-203ENST00000466285 ZNF706Q9Y5V0 76 aaPredicted RBP11.56□□□□□ -0.56
COL6A1-203ENST00000466285 LINC00483Q53H64 154 aa11.55□□□□□ -0.56
COL6A1-203ENST00000466285 ASB16-AS1Q495Z4 193 aa11.54□□□□□ -0.56
COL6A1-203ENST00000466285 ETDCA0A1B0GVM5 59 aa11.53□□□□□ -0.56
COL6A1-203ENST00000466285 MOBPQ13875 183 aa11.52□□□□□ -0.57
COL6A1-203ENST00000466285 GAGE2AQ6NT46 116 aa11.52□□□□□ -0.57
COL6A1-203ENST00000466285 B5MCH6 92 aa11.51□□□□□ -0.57
COL6A1-203ENST00000466285 C4orf48Q5BLP8 95 aa11.51□□□□□ -0.57
COL6A1-203ENST00000466285 Q9BRP9 147 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms