RNA–Protein interactions for RNA: ENST00000465155.5

ATF3-208, Transcript of activating transcription factor 3, humanhuman

TSL 2

Gene ATF3, Length 1,626 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3-208ENST00000465155 SPANXB1Q9NS25 103 aaPredicted RBP8.61□□□□□ -1.03
ATF3-208ENST00000465155 SPANXCQ9NY87 97 aa8.61□□□□□ -1.03
ATF3-208ENST00000465155 SDIM1Q6ZPB5 146 aa8.6□□□□□ -1.03
ATF3-208ENST00000465155 HIST1H4GQ99525 98 aa8.6□□□□□ -1.03
ATF3-208ENST00000465155 SND1-IT1Q9HBX3 110 aa8.6□□□□□ -1.03
ATF3-208ENST00000465155 XAGE1AQ9HD64 81 aa8.6□□□□□ -1.03
ATF3-208ENST00000465155 HECTD4Q9Y4D8 3996 aa8.6□□□□□ -1.03
ATF3-208ENST00000465155 A0A096LNI7 61 aa8.59□□□□□ -1.03
ATF3-208ENST00000465155 PKIGQ9Y2B9 76 aa8.59□□□□□ -1.03
ATF3-208ENST00000465155 PKD1P98161 4303 aa8.59□□□□□ -1.03
ATF3-208ENST00000465155 IGKV2-24A0A0C4DH68 120 aa8.58□□□□□ -1.04
ATF3-208ENST00000465155 C16orf90A8MZG2 172 aa8.58□□□□□ -1.04
ATF3-208ENST00000465155 GCSHP23434 173 aa8.58□□□□□ -1.04
ATF3-208ENST00000465155 PTTG1IPP53801 180 aa8.58□□□□□ -1.04
ATF3-208ENST00000465155 Q6ZVH6 145 aa8.58□□□□□ -1.04
ATF3-208ENST00000465155 DNAH11Q96DT5 4516 aa8.58□□□□□ -1.04
ATF3-208ENST00000465155 EIF4EBP3O60516 100 aaPredicted RBP8.58□□□□□ -1.04
ATF3-208ENST00000465155 LINC00308Q8TCZ7 52 aa8.58□□□□□ -1.04
ATF3-208ENST00000465155 C9orf129Q5T035 196 aaKnown RBP8.57□□□□□ -1.04
ATF3-208ENST00000465155 SOSTDC1Q6X4U4 206 aa8.57□□□□□ -1.04
ATF3-208ENST00000465155 MUSTN1Q8IVN3 82 aa8.57□□□□□ -1.04
ATF3-208ENST00000465155 CHTF8P0CG12 524 aa8.56□□□□□ -1.04
ATF3-208ENST00000465155 IFITM1P13164 125 aa8.55□□□□□ -1.04
ATF3-208ENST00000465155 TAL2Q16559 108 aa8.55□□□□□ -1.04
ATF3-208ENST00000465155 COPS9Q8WXC6 57 aa8.55□□□□□ -1.04
ATF3-208ENST00000465155 HSD52Q0P140 79 aa8.54□□□□□ -1.04
ATF3-208ENST00000465155 LOC107984156A0A0G2JMH3 177 aa8.54□□□□□ -1.04
ATF3-208ENST00000465155 PANO1I0J062 215 aa8.54□□□□□ -1.04
ATF3-208ENST00000465155 HINT1P49773 126 aaPredicted RBP8.54□□□□□ -1.04
ATF3-208ENST00000465155 KRTAP10-1P60331 282 aa8.54□□□□□ -1.04
ATF3-208ENST00000465155 ARL17AQ8IVW1 177 aa8.54□□□□□ -1.04
ATF3-208ENST00000465155 CEND1Q8N111 149 aa8.54□□□□□ -1.04
ATF3-208ENST00000465155 LINC00474Q9P2X8 69 aa8.54□□□□□ -1.04
ATF3-208ENST00000465155 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.54□□□□□ -1.04
ATF3-208ENST00000465155 FAM168BA1KXE4 195 aa8.53□□□□□ -1.04
ATF3-208ENST00000465155 DPH3Q96FX2 82 aa8.53□□□□□ -1.04
ATF3-208ENST00000465155 RPL24P83731 157 aaKnown RBP8.52□□□□□ -1.05
ATF3-208ENST00000465155 Q8NDZ9 215 aa8.52□□□□□ -1.05
ATF3-208ENST00000465155 SPACA4Q8TDM5 124 aa8.52□□□□□ -1.05
ATF3-208ENST00000465155 DNAH5Q8TE73 4624 aa8.52□□□□□ -1.05
ATF3-208ENST00000465155 PPDPFQ9H3Y8 114 aa8.51□□□□□ -1.05
ATF3-208ENST00000465155 A4D1N5 150 aa8.51□□□□□ -1.05
ATF3-208ENST00000465155 SERTAD4-AS1Q5TG53 156 aa8.51□□□□□ -1.05
ATF3-208ENST00000465155 FAM19A5Q7Z5A7 132 aaPredicted RBP8.51□□□□□ -1.05
ATF3-208ENST00000465155 FXYD2P54710 66 aa8.5□□□□□ -1.05
ATF3-208ENST00000465155 BVES-AS1Q5T3Y7 98 aa8.5□□□□□ -1.05
ATF3-208ENST00000465155 FAM30AQ9NZY2 134 aa8.5□□□□□ -1.05
ATF3-208ENST00000465155 A0A1W2PNN7 141 aa8.49□□□□□ -1.05
ATF3-208ENST00000465155 NDUFC2O95298 119 aa8.49□□□□□ -1.05
ATF3-208ENST00000465155 VPREB1P12018 145 aa8.49□□□□□ -1.05
ATF3-208ENST00000465155 PRR3P79522 188 aaKnown RBP8.49□□□□□ -1.05
ATF3-208ENST00000465155 KRTAP7-1Q8IUC3 87 aa8.49□□□□□ -1.05
ATF3-208ENST00000465155 PLA2G2DQ9UNK4 145 aa8.49□□□□□ -1.05
ATF3-208ENST00000465155 PKHD1P08F94 4074 aa8.48□□□□□ -1.05
ATF3-208ENST00000465155 A6NDN8 102 aa8.48□□□□□ -1.05
ATF3-208ENST00000465155 NCR3O14931 201 aa8.48□□□□□ -1.05
ATF3-208ENST00000465155 A0A087WYN8 130 aa8.47□□□□□ -1.05
ATF3-208ENST00000465155 TMEM238LA0A1B0GVL6 79 aa8.47□□□□□ -1.05
ATF3-208ENST00000465155 UBE2V1Q13404 147 aa8.47□□□□□ -1.05
ATF3-208ENST00000465155 Q6ZSA8 131 aa8.47□□□□□ -1.05
ATF3-208ENST00000465155 NKAPP1Q8N9T2 125 aa8.47□□□□□ -1.05
ATF3-208ENST00000465155 IGKV2-28A0A075B6P5 120 aa8.47□□□□□ -1.05
ATF3-208ENST00000465155 IGKV2D-28P01615 120 aa8.47□□□□□ -1.05
ATF3-208ENST00000465155 IGLV5-37A0A075B6J1 123 aa8.46□□□□□ -1.06
ATF3-208ENST00000465155 C22orf24Q9Y442 160 aa8.46□□□□□ -1.06
ATF3-208ENST00000465155 M0QXV9 152 aa8.45□□□□□ -1.06
ATF3-208ENST00000465155 PLAC8Q9NZF1 115 aa8.45□□□□□ -1.06
ATF3-208ENST00000465155 CFC1BP0CG36 223 aa8.44□□□□□ -1.06
ATF3-208ENST00000465155 CFC1P0CG37 223 aa8.44□□□□□ -1.06
ATF3-208ENST00000465155 HAMPP81172 84 aa8.44□□□□□ -1.06
ATF3-208ENST00000465155 NHP2Q9NX24 153 aaKnown RBP8.44□□□□□ -1.06
ATF3-208ENST00000465155 TRBV10-2A0A0K0K1G8 114 aa8.43□□□□□ -1.06
ATF3-208ENST00000465155 M0R378 163 aa8.43□□□□□ -1.06
ATF3-208ENST00000465155 VAMP3Q15836 100 aa8.43□□□□□ -1.06
ATF3-208ENST00000465155 MRPL55Q7Z7F7 128 aaKnown RBP8.43□□□□□ -1.06
ATF3-208ENST00000465155 LINC00337Q8N6G1 96 aa8.43□□□□□ -1.06
ATF3-208ENST00000465155 CIRBP-AS1Q8TBR5 109 aa8.43□□□□□ -1.06
ATF3-208ENST00000465155 GAGE10A6NGK3 116 aa8.43□□□□□ -1.06
ATF3-208ENST00000465155 TAX1BP3O14907 124 aa8.43□□□□□ -1.06
ATF3-208ENST00000465155 SCXQ7RTU7 201 aa8.43□□□□□ -1.06
ATF3-208ENST00000465155 PHF5AQ7RTV0 110 aaKnown RBP8.43□□□□□ -1.06
ATF3-208ENST00000465155 OR13C6PQ8NH95 151 aa8.43□□□□□ -1.06
ATF3-208ENST00000465155 C7orf33Q8WU49 177 aa8.43□□□□□ -1.06
ATF3-208ENST00000465155 RAB37Q96AX2 223 aa8.43□□□□□ -1.06
ATF3-208ENST00000465155 A0A0B4J2C4 111 aa8.42□□□□□ -1.06
ATF3-208ENST00000465155 EPM2AB3EWF7 344 aa8.42□□□□□ -1.06
ATF3-208ENST00000465155 S100A7L2Q5SY68 101 aa8.42□□□□□ -1.06
ATF3-208ENST00000465155 LINC00167Q96N53 147 aa8.42□□□□□ -1.06
ATF3-208ENST00000465155 TRAV13-2A0A0B4J235 113 aa8.41□□□□□ -1.06
ATF3-208ENST00000465155 K7ERJ3 54 aa8.41□□□□□ -1.06
ATF3-208ENST00000465155 RPL37AP8A6NKH3 93 aa8.4□□□□□ -1.06
ATF3-208ENST00000465155 GTF2H5Q6ZYL4 71 aa8.4□□□□□ -1.06
ATF3-208ENST00000465155 TRBV10-3A0A0K0K1G6 114 aa8.4□□□□□ -1.07
ATF3-208ENST00000465155 A0A1B0GWB2 263 aa8.4□□□□□ -1.07
ATF3-208ENST00000465155 TMEM126AQ9H061 195 aa8.4□□□□□ -1.07
ATF3-208ENST00000465155 IGLV6-57P01721 117 aa8.39□□□□□ -1.07
ATF3-208ENST00000465155 RPL13AP40429 203 aaKnown RBP8.39□□□□□ -1.07
ATF3-208ENST00000465155 UBE2BP63146 152 aa8.39□□□□□ -1.07
ATF3-208ENST00000465155 PRO1854Q9UHT4 67 aa8.39□□□□□ -1.07
ATF3-208ENST00000465155 DYNC1H1Q14204 4646 aaKnown RBP8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 90.9 ms