RNA–Protein interactions for RNA: ENST00000465132.1

CPSF4-209, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 927 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-209ENST00000465132 IGKV2D-26A0A0A0MRZ7 120 aa11.07□□□□□ -0.64
CPSF4-209ENST00000465132 TIMM17BO60830 172 aa11.07□□□□□ -0.64
CPSF4-209ENST00000465132 OXTP01178 125 aa11.07□□□□□ -0.64
CPSF4-209ENST00000465132 S100A12P80511 92 aa11.07□□□□□ -0.64
CPSF4-209ENST00000465132 MIEN1Q9BRT3 115 aa11.06□□□□□ -0.64
CPSF4-209ENST00000465132 A0A0J9YXY3 114 aa11.05□□□□□ -0.64
CPSF4-209ENST00000465132 TMEM238C9JI98 176 aa11.05□□□□□ -0.64
CPSF4-209ENST00000465132 SMIM13P0DJ93 91 aa11.05□□□□□ -0.64
CPSF4-209ENST00000465132 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.05□□□□□ -0.64
CPSF4-209ENST00000465132 CHTF8P0CG12 524 aa11.04□□□□□ -0.64
CPSF4-209ENST00000465132 RPL24P83731 157 aaKnown RBP11.04□□□□□ -0.64
CPSF4-209ENST00000465132 PYY3Q5JQD4 70 aa11.04□□□□□ -0.64
CPSF4-209ENST00000465132 FAT3Q8TDW7 4589 aa11.04□□□□□ -0.64
CPSF4-209ENST00000465132 A0A087WYN8 130 aa11.03□□□□□ -0.64
CPSF4-209ENST00000465132 SPATA45Q537H7 98 aa11.03□□□□□ -0.64
CPSF4-209ENST00000465132 Q6ZVH6 145 aa11.03□□□□□ -0.64
CPSF4-209ENST00000465132 PLAC8Q9NZF1 115 aa11.03□□□□□ -0.64
CPSF4-209ENST00000465132 MIR7-3HGQ8N6C7 128 aa11.02□□□□□ -0.65
CPSF4-209ENST00000465132 SND1-IT1Q9HBX3 110 aa11.02□□□□□ -0.65
CPSF4-209ENST00000465132 XAGE1AQ9HD64 81 aa11.02□□□□□ -0.65
CPSF4-209ENST00000465132 PLA2G2DQ9UNK4 145 aa11.02□□□□□ -0.65
CPSF4-209ENST00000465132 PAM16Q9Y3D7 125 aa11.02□□□□□ -0.65
CPSF4-209ENST00000465132 A0A0U1RRA0 63 aa11.01□□□□□ -0.65
CPSF4-209ENST00000465132 DLEU1O43261 78 aa11.01□□□□□ -0.65
CPSF4-209ENST00000465132 C7orf33Q8WU49 177 aa11.01□□□□□ -0.65
CPSF4-209ENST00000465132 COX8AP10176 69 aa11□□□□□ -0.65
CPSF4-209ENST00000465132 LBHQ53QV2 105 aaPredicted RBP11□□□□□ -0.65
CPSF4-209ENST00000465132 C9orf129Q5T035 196 aaKnown RBP11□□□□□ -0.65
CPSF4-209ENST00000465132 PCP2Q8IVA1 136 aa11□□□□□ -0.65
CPSF4-209ENST00000465132 SMIM6P0DI80 62 aa10.99□□□□□ -0.65
CPSF4-209ENST00000465132 RPL37AP61513 92 aaKnown RBP10.99□□□□□ -0.65
CPSF4-209ENST00000465132 NKAPP1Q8N9T2 125 aa10.99□□□□□ -0.65
CPSF4-209ENST00000465132 UBR4Q5T4S7 5183 aa10.99□□□□□ -0.65
CPSF4-209ENST00000465132 PKHD1L1Q86WI1 4243 aa10.98□□□□□ -0.65
CPSF4-209ENST00000465132 SLC25A34Q6PIV7 304 aa10.98□□□□□ -0.65
CPSF4-209ENST00000465132 BOD1L2Q8IYS8 172 aa10.98□□□□□ -0.65
CPSF4-209ENST00000465132 TTTY13Q9BZ97 58 aa10.98□□□□□ -0.65
CPSF4-209ENST00000465132 TP73-AS1Q9UF72 201 aa10.98□□□□□ -0.65
CPSF4-209ENST00000465132 LOC107984156A0A0G2JMH3 177 aa10.97□□□□□ -0.65
CPSF4-209ENST00000465132 PANO1I0J062 215 aa10.97□□□□□ -0.65
CPSF4-209ENST00000465132 IFITM1P13164 125 aa10.97□□□□□ -0.65
CPSF4-209ENST00000465132 FAM19A5Q7Z5A7 132 aaPredicted RBP10.97□□□□□ -0.65
CPSF4-209ENST00000465132 ARL17AQ8IVW1 177 aa10.97□□□□□ -0.65
CPSF4-209ENST00000465132 HNRNPA3P51991 378 aaKnown RBP10.96□□□□□ -0.65
CPSF4-209ENST00000465132 M0QXV9 152 aa10.95□□□□□ -0.66
CPSF4-209ENST00000465132 SRSF9Q13242 221 aaKnown RBP eCLIP10.95□□□□□ -0.66
CPSF4-209ENST00000465132 SPANXDQ9BXN6 97 aa10.95□□□□□ -0.66
CPSF4-209ENST00000465132 PPDPFQ9H3Y8 114 aa10.95□□□□□ -0.66
CPSF4-209ENST00000465132 SPANXCQ9NY87 97 aa10.95□□□□□ -0.66
CPSF4-209ENST00000465132 IGLV5-37A0A075B6J1 123 aa10.94□□□□□ -0.66
CPSF4-209ENST00000465132 A0A1W2PNN7 141 aa10.94□□□□□ -0.66
CPSF4-209ENST00000465132 NDUFC2O95298 119 aa10.93□□□□□ -0.66
CPSF4-209ENST00000465132 DAND5Q8N907 189 aa10.93□□□□□ -0.66
CPSF4-209ENST00000465132 C14orf144Q96I85 54 aa10.93□□□□□ -0.66
CPSF4-209ENST00000465132 SPANXB1Q9NS25 103 aaPredicted RBP10.93□□□□□ -0.66
CPSF4-209ENST00000465132 LOC105371267A0A1B0GV96 52 aa10.92□□□□□ -0.66
CPSF4-209ENST00000465132 FAM168BA1KXE4 195 aa10.92□□□□□ -0.66
CPSF4-209ENST00000465132 UBE2BP63146 152 aa10.92□□□□□ -0.66
CPSF4-209ENST00000465132 ADAMTSL4-AS1Q5T5F5 129 aa10.92□□□□□ -0.66
CPSF4-209ENST00000465132 MRPL55Q7Z7F7 128 aaKnown RBP10.92□□□□□ -0.66
CPSF4-209ENST00000465132 LINC00308Q8TCZ7 52 aa10.92□□□□□ -0.66
CPSF4-209ENST00000465132 LITAFQ99732 161 aa10.92□□□□□ -0.66
CPSF4-209ENST00000465132 CBY1Q9Y3M2 126 aa10.92□□□□□ -0.66
CPSF4-209ENST00000465132 C22orf24Q9Y442 160 aa10.92□□□□□ -0.66
CPSF4-209ENST00000465132 HIGD1BQ9P298 99 aa10.91□□□□□ -0.66
CPSF4-209ENST00000465132 M0R378 163 aa10.9□□□□□ -0.66
CPSF4-209ENST00000465132 LINC00518Q8N0U6 118 aa10.9□□□□□ -0.66
CPSF4-209ENST00000465132 TRBV10-2A0A0K0K1G8 114 aa10.89□□□□□ -0.67
CPSF4-209ENST00000465132 VPREB1P12018 145 aa10.89□□□□□ -0.67
CPSF4-209ENST00000465132 UQCR10Q9UDW1 63 aa10.89□□□□□ -0.67
CPSF4-209ENST00000465132 HIST1H4GQ99525 98 aa10.88□□□□□ -0.67
CPSF4-209ENST00000465132 MT1HL1P0DM35 61 aa10.87□□□□□ -0.67
CPSF4-209ENST00000465132 NPC2P61916 151 aa10.87□□□□□ -0.67
CPSF4-209ENST00000465132 PHF5AQ7RTV0 110 aaKnown RBP10.87□□□□□ -0.67
CPSF4-209ENST00000465132 TAL2Q16559 108 aa10.85□□□□□ -0.67
CPSF4-209ENST00000465132 S100A7L2Q5SY68 101 aa10.85□□□□□ -0.67
CPSF4-209ENST00000465132 LINC00167Q96N53 147 aa10.85□□□□□ -0.67
CPSF4-209ENST00000465132 MUSTN1Q8IVN3 82 aa10.84□□□□□ -0.67
CPSF4-209ENST00000465132 KRTAP7-1Q8IUC3 87 aa10.83□□□□□ -0.68
CPSF4-209ENST00000465132 TSTD3H0UI37 97 aa10.82□□□□□ -0.68
CPSF4-209ENST00000465132 SOSTDC1Q6X4U4 206 aa10.82□□□□□ -0.68
CPSF4-209ENST00000465132 C12orf57Q99622 126 aa10.82□□□□□ -0.68
CPSF4-209ENST00000465132 TMEM238LA0A1B0GVL6 79 aa10.81□□□□□ -0.68
CPSF4-209ENST00000465132 GAGE10A6NGK3 116 aa10.81□□□□□ -0.68
CPSF4-209ENST00000465132 A6NJY4 79 aa10.81□□□□□ -0.68
CPSF4-209ENST00000465132 NCR3O14931 201 aa10.81□□□□□ -0.68
CPSF4-209ENST00000465132 TMEM126AQ9H061 195 aa10.81□□□□□ -0.68
CPSF4-209ENST00000465132 IGLV1-50A0A075B6I6 118 aa10.8□□□□□ -0.68
CPSF4-209ENST00000465132 TRAV13-2A0A0B4J235 113 aa10.8□□□□□ -0.68
CPSF4-209ENST00000465132 DDTP30046 118 aa10.8□□□□□ -0.68
CPSF4-209ENST00000465132 RPL37AP8A6NKH3 93 aa10.79□□□□□ -0.68
CPSF4-209ENST00000465132 IGKV2-28A0A075B6P5 120 aa10.78□□□□□ -0.68
CPSF4-209ENST00000465132 IGKV2D-28P01615 120 aa10.78□□□□□ -0.68
CPSF4-209ENST00000465132 PRR3P79522 188 aaKnown RBP10.78□□□□□ -0.68
CPSF4-209ENST00000465132 C2orf91Q6ZV80 131 aa10.78□□□□□ -0.68
CPSF4-209ENST00000465132 OR13C6PQ8NH95 151 aa10.78□□□□□ -0.68
CPSF4-209ENST00000465132 PSORS1C2Q9UIG4 136 aa10.78□□□□□ -0.68
CPSF4-209ENST00000465132 PRYO14603 147 aa10.77□□□□□ -0.69
CPSF4-209ENST00000465132 HSD52Q0P140 79 aa10.77□□□□□ -0.69
CPSF4-209ENST00000465132 C1orf137Q5JT78 98 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms