RNA–Protein interactions for RNA: ENST00000464812.1

NUDCD3-204, Transcript of NudC domain containing 3, humanhuman

TSL 5

Gene NUDCD3, Length 811 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-204ENST00000464812 A0A096LNI7 61 aa5.74□□□□□ -1.49
NUDCD3-204ENST00000464812 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.74□□□□□ -1.49
NUDCD3-204ENST00000464812 CHTF8P0CG12 524 aa5.74□□□□□ -1.49
NUDCD3-204ENST00000464812 SLC25A34Q6PIV7 304 aa5.74□□□□□ -1.49
NUDCD3-204ENST00000464812 SFTA2Q6UW10 78 aa5.74□□□□□ -1.49
NUDCD3-204ENST00000464812 KRTAP9-9Q9BYP9 154 aa5.74□□□□□ -1.49
NUDCD3-204ENST00000464812 KRTAP9-4Q9BYQ2 154 aa5.74□□□□□ -1.49
NUDCD3-204ENST00000464812 NDUFC2-KCTD14E9PQ53 114 aa5.73□□□□□ -1.49
NUDCD3-204ENST00000464812 TLX1NBP0CAT3 122 aa5.73□□□□□ -1.49
NUDCD3-204ENST00000464812 KRTAP10-1P60331 282 aa5.73□□□□□ -1.49
NUDCD3-204ENST00000464812 RPL18AQ02543 176 aaKnown RBP5.73□□□□□ -1.49
NUDCD3-204ENST00000464812 SOSTDC1Q6X4U4 206 aa5.73□□□□□ -1.49
NUDCD3-204ENST00000464812 SCGB1D4Q6XE38 83 aa5.73□□□□□ -1.49
NUDCD3-204ENST00000464812 SDIM1Q6ZPB5 146 aa5.73□□□□□ -1.49
NUDCD3-204ENST00000464812 MIR7-3HGQ8N6C7 128 aa5.73□□□□□ -1.49
NUDCD3-204ENST00000464812 Q8NDZ9 215 aa5.73□□□□□ -1.49
NUDCD3-204ENST00000464812 LOC107984640A0A0U1RRK4 108 aa5.72□□□□□ -1.49
NUDCD3-204ENST00000464812 H3BS24 57 aa5.72□□□□□ -1.49
NUDCD3-204ENST00000464812 LINC00158P58513 81 aa5.72□□□□□ -1.49
NUDCD3-204ENST00000464812 GAGE2BQ13066 116 aa5.72□□□□□ -1.49
NUDCD3-204ENST00000464812 GAGE2EQ4V326 116 aa5.72□□□□□ -1.49
NUDCD3-204ENST00000464812 C9orf129Q5T035 196 aaKnown RBP5.72□□□□□ -1.49
NUDCD3-204ENST00000464812 SND1-IT1Q9HBX3 110 aa5.72□□□□□ -1.49
NUDCD3-204ENST00000464812 GAGE2DQ9UEU5 116 aa5.72□□□□□ -1.49
NUDCD3-204ENST00000464812 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.72□□□□□ -1.49
NUDCD3-204ENST00000464812 PKHD1L1Q86WI1 4243 aa5.71□□□□□ -1.49
NUDCD3-204ENST00000464812 IGKV2-24A0A0C4DH68 120 aa5.71□□□□□ -1.5
NUDCD3-204ENST00000464812 TIMM17BO60830 172 aa5.71□□□□□ -1.5
NUDCD3-204ENST00000464812 PTTG1IPP53801 180 aa5.71□□□□□ -1.5
NUDCD3-204ENST00000464812 NPC2P61916 151 aa5.71□□□□□ -1.5
NUDCD3-204ENST00000464812 COX17Q14061 63 aa5.71□□□□□ -1.5
NUDCD3-204ENST00000464812 KRTAP7-1Q8IUC3 87 aa5.71□□□□□ -1.5
NUDCD3-204ENST00000464812 SPANXDQ9BXN6 97 aa5.71□□□□□ -1.5
NUDCD3-204ENST00000464812 XAGE1AQ9HD64 81 aa5.71□□□□□ -1.5
NUDCD3-204ENST00000464812 SPANXCQ9NY87 97 aa5.71□□□□□ -1.5
NUDCD3-204ENST00000464812 UQCR10Q9UDW1 63 aa5.71□□□□□ -1.5
NUDCD3-204ENST00000464812 FAM168BA1KXE4 195 aa5.7□□□□□ -1.5
NUDCD3-204ENST00000464812 C16orf90A8MZG2 172 aa5.7□□□□□ -1.5
NUDCD3-204ENST00000464812 GCSHP23434 173 aa5.7□□□□□ -1.5
NUDCD3-204ENST00000464812 CIRBPQ14011 172 aaKnown RBP5.7□□□□□ -1.5
NUDCD3-204ENST00000464812 SPACA4Q8TDM5 124 aa5.7□□□□□ -1.5
NUDCD3-204ENST00000464812 SPANXB1Q9NS25 103 aaPredicted RBP5.7□□□□□ -1.5
NUDCD3-204ENST00000464812 FAM30AQ9NZY2 134 aa5.7□□□□□ -1.5
NUDCD3-204ENST00000464812 HIGD1BQ9P298 99 aa5.7□□□□□ -1.5
NUDCD3-204ENST00000464812 MYCBP2O75592 4640 aa5.7□□□□□ -1.5
NUDCD3-204ENST00000464812 TMEM238C9JI98 176 aa5.69□□□□□ -1.5
NUDCD3-204ENST00000464812 HAMPP81172 84 aa5.69□□□□□ -1.5
NUDCD3-204ENST00000464812 SERTAD4-AS1Q5TG53 156 aa5.69□□□□□ -1.5
NUDCD3-204ENST00000464812 Q6ZSA8 131 aa5.69□□□□□ -1.5
NUDCD3-204ENST00000464812 SVIPQ8NHG7 77 aa5.69□□□□□ -1.5
NUDCD3-204ENST00000464812 MIEN1Q9BRT3 115 aa5.69□□□□□ -1.5
NUDCD3-204ENST00000464812 A0A1W2PNN7 141 aa5.68□□□□□ -1.5
NUDCD3-204ENST00000464812 HNRNPA3P51991 378 aaKnown RBP5.68□□□□□ -1.5
NUDCD3-204ENST00000464812 XGP55808 180 aa5.68□□□□□ -1.5
NUDCD3-204ENST00000464812 LINC00308Q8TCZ7 52 aa5.68□□□□□ -1.5
NUDCD3-204ENST00000464812 LOC107984156A0A0G2JMH3 177 aa5.67□□□□□ -1.5
NUDCD3-204ENST00000464812 LINC00587B1AMM8 73 aa5.67□□□□□ -1.5
NUDCD3-204ENST00000464812 TSTD3H0UI37 97 aa5.67□□□□□ -1.5
NUDCD3-204ENST00000464812 VPREB1P12018 145 aa5.67□□□□□ -1.5
NUDCD3-204ENST00000464812 KRTAP19-1Q8IUB9 90 aa5.67□□□□□ -1.5
NUDCD3-204ENST00000464812 MUSTN1Q8IVN3 82 aa5.67□□□□□ -1.5
NUDCD3-204ENST00000464812 ARL17AQ8IVW1 177 aa5.67□□□□□ -1.5
NUDCD3-204ENST00000464812 PRR3P79522 188 aaKnown RBP5.66□□□□□ -1.5
NUDCD3-204ENST00000464812 FAM19A5Q7Z5A7 132 aaPredicted RBP5.66□□□□□ -1.5
NUDCD3-204ENST00000464812 FAT3Q8TDW7 4589 aa5.65□□□□□ -1.5
NUDCD3-204ENST00000464812 CDK2AP2O75956 126 aa5.65□□□□□ -1.5
NUDCD3-204ENST00000464812 FXYD2P54710 66 aa5.65□□□□□ -1.5
NUDCD3-204ENST00000464812 SRSF9Q13242 221 aaKnown RBP eCLIP5.65□□□□□ -1.5
NUDCD3-204ENST00000464812 SCXQ7RTU7 201 aa5.65□□□□□ -1.5
NUDCD3-204ENST00000464812 HIST1H4GQ99525 98 aa5.65□□□□□ -1.5
NUDCD3-204ENST00000464812 PKIGQ9Y2B9 76 aa5.65□□□□□ -1.5
NUDCD3-204ENST00000464812 LRP1Q07954 4544 aaKnown RBP5.64□□□□□ -1.51
NUDCD3-204ENST00000464812 IGKV2-28A0A075B6P5 120 aa5.64□□□□□ -1.51
NUDCD3-204ENST00000464812 A0A087WYN8 130 aa5.64□□□□□ -1.51
NUDCD3-204ENST00000464812 NCR3O14931 201 aa5.64□□□□□ -1.51
NUDCD3-204ENST00000464812 IGKV2D-28P01615 120 aa5.64□□□□□ -1.51
NUDCD3-204ENST00000464812 IFITM1P13164 125 aa5.64□□□□□ -1.51
NUDCD3-204ENST00000464812 DDTP30046 118 aa5.64□□□□□ -1.51
NUDCD3-204ENST00000464812 HSD52Q0P140 79 aa5.64□□□□□ -1.51
NUDCD3-204ENST00000464812 Q6ZVH6 145 aa5.64□□□□□ -1.51
NUDCD3-204ENST00000464812 PLAC8Q9NZF1 115 aa5.64□□□□□ -1.51
NUDCD3-204ENST00000464812 PLA2G2DQ9UNK4 145 aa5.64□□□□□ -1.51
NUDCD3-204ENST00000464812 IGLV5-37A0A075B6J1 123 aa5.63□□□□□ -1.51
NUDCD3-204ENST00000464812 KRTAP4-8A0A0G2JLE6 195 aa5.63□□□□□ -1.51
NUDCD3-204ENST00000464812 A4D1N5 150 aa5.63□□□□□ -1.51
NUDCD3-204ENST00000464812 EPM2AB3EWF7 344 aa5.63□□□□□ -1.51
NUDCD3-204ENST00000464812 CTAG1AP78358 180 aa5.63□□□□□ -1.51
NUDCD3-204ENST00000464812 TAL2Q16559 108 aa5.63□□□□□ -1.51
NUDCD3-204ENST00000464812 KRTAP11-1Q8IUC1 163 aa5.63□□□□□ -1.51
NUDCD3-204ENST00000464812 CEND1Q8N111 149 aa5.63□□□□□ -1.51
NUDCD3-204ENST00000464812 CIRBP-AS1Q8TBR5 109 aa5.63□□□□□ -1.51
NUDCD3-204ENST00000464812 PPDPFQ9H3Y8 114 aa5.63□□□□□ -1.51
NUDCD3-204ENST00000464812 HERC1Q15751 4861 aa5.62□□□□□ -1.51
NUDCD3-204ENST00000464812 M0QXV9 152 aa5.62□□□□□ -1.51
NUDCD3-204ENST00000464812 PHF5AQ7RTV0 110 aaKnown RBP5.62□□□□□ -1.51
NUDCD3-204ENST00000464812 LINC00337Q8N6G1 96 aa5.62□□□□□ -1.51
NUDCD3-204ENST00000464812 C7orf33Q8WU49 177 aa5.62□□□□□ -1.51
NUDCD3-204ENST00000464812 LINC00474Q9P2X8 69 aa5.62□□□□□ -1.51
NUDCD3-204ENST00000464812 SRRM2Q9UQ35 2752 aaKnown RBP5.62□□□□□ -1.51
NUDCD3-204ENST00000464812 GAGE10A6NGK3 116 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms