RNA–Protein interactions for RNA: ENST00000464480.1

HMGXB4-205, Transcript of HMG-box containing 4, humanhuman

TSL 2

Gene HMGXB4, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-205ENST00000464480 CSAG1Q6PB30 78 aa1.54□□□□□ -2.16
HMGXB4-205ENST00000464480 ZNF625Q96I27 306 aaPredicted RBP1.54□□□□□ -2.16
HMGXB4-205ENST00000464480 MINOS1-NBL1R4GNA1 71 aa1.54□□□□□ -2.16
HMGXB4-205ENST00000464480 CEP192Q8TEP8 1941 aa1.54□□□□□ -2.16
HMGXB4-205ENST00000464480 NCR3O14931 201 aa1.53□□□□□ -2.16
HMGXB4-205ENST00000464480 NDUFA1O15239 70 aa1.53□□□□□ -2.16
HMGXB4-205ENST00000464480 MRPL33O75394 65 aaKnown RBP1.53□□□□□ -2.16
HMGXB4-205ENST00000464480 RPS27P42677 84 aaKnown RBP1.53□□□□□ -2.16
HMGXB4-205ENST00000464480 KRTAP12-4P60329 112 aa1.53□□□□□ -2.16
HMGXB4-205ENST00000464480 ESPL1Q14674 2120 aa1.53□□□□□ -2.16
HMGXB4-205ENST00000464480 DEFB112Q30KQ8 113 aa1.53□□□□□ -2.16
HMGXB4-205ENST00000464480 Q8TAT8 98 aa1.53□□□□□ -2.16
HMGXB4-205ENST00000464480 LINC00308Q8TCZ7 52 aa1.53□□□□□ -2.16
HMGXB4-205ENST00000464480 MED12Q93074 2177 aa1.53□□□□□ -2.16
HMGXB4-205ENST00000464480 DIDO1Q9BTC0 2240 aaKnown RBP1.53□□□□□ -2.16
HMGXB4-205ENST00000464480 PLAC8Q9NZF1 115 aa1.53□□□□□ -2.16
HMGXB4-205ENST00000464480 DNAJC13O75165 2243 aa1.52□□□□□ -2.17
HMGXB4-205ENST00000464480 FREM1Q5H8C1 2179 aa1.52□□□□□ -2.17
HMGXB4-205ENST00000464480 TNRC6BQ9UPQ9 1833 aaKnown RBP1.52□□□□□ -2.17
HMGXB4-205ENST00000464480 IGHV3-64A0A075B6Q5 118 aa1.52□□□□□ -2.17
HMGXB4-205ENST00000464480 TRGV2A0A075B6R0 118 aa1.52□□□□□ -2.17
HMGXB4-205ENST00000464480 PRCDQ00LT1 54 aa1.52□□□□□ -2.17
HMGXB4-205ENST00000464480 PIGYQ3MUY2 71 aa1.52□□□□□ -2.17
HMGXB4-205ENST00000464480 ZGRF1Q86YA3 2104 aa1.52□□□□□ -2.17
HMGXB4-205ENST00000464480 CLPSL1A2RUU4 121 aa1.51□□□□□ -2.17
HMGXB4-205ENST00000464480 NUPR2A6NF83 97 aa1.51□□□□□ -2.17
HMGXB4-205ENST00000464480 CCL18P55774 89 aa1.51□□□□□ -2.17
HMGXB4-205ENST00000464480 COX17Q14061 63 aa1.51□□□□□ -2.17
HMGXB4-205ENST00000464480 DEFB113Q30KQ7 82 aa1.51□□□□□ -2.17
HMGXB4-205ENST00000464480 SPINK9Q5DT21 86 aa1.51□□□□□ -2.17
HMGXB4-205ENST00000464480 KRTAP5-7Q6L8G8 165 aa1.51□□□□□ -2.17
HMGXB4-205ENST00000464480 COA5Q86WW8 74 aa1.51□□□□□ -2.17
HMGXB4-205ENST00000464480 TTTY12Q9BZ98 90 aa1.51□□□□□ -2.17
HMGXB4-205ENST00000464480 KCNQ1DNQ9H478 68 aa1.51□□□□□ -2.17
HMGXB4-205ENST00000464480 DOCK10Q96BY6 2186 aa1.51□□□□□ -2.17
HMGXB4-205ENST00000464480 TNCP24821 2201 aa1.5□□□□□ -2.17
HMGXB4-205ENST00000464480 IGKV2-29A2NJV5 120 aaPredicted RBP1.5□□□□□ -2.17
HMGXB4-205ENST00000464480 J3QKU1 62 aa1.5□□□□□ -2.17
HMGXB4-205ENST00000464480 CCL3L1P16619 93 aa1.5□□□□□ -2.17
HMGXB4-205ENST00000464480 CRIP1P50238 77 aa1.5□□□□□ -2.17
HMGXB4-205ENST00000464480 SPATA8Q6RVD6 105 aa1.5□□□□□ -2.17
HMGXB4-205ENST00000464480 DEFB132Q7Z7B7 95 aa1.5□□□□□ -2.17
HMGXB4-205ENST00000464480 C4orf3Q8WVX3 66 aa1.5□□□□□ -2.17
HMGXB4-205ENST00000464480 CR1P17927 2039 aa1.5□□□□□ -2.17
HMGXB4-205ENST00000464480 CACNA1CQ13936 2221 aa1.5□□□□□ -2.17
HMGXB4-205ENST00000464480 PRRC2BQ5JSZ5 2229 aaKnown RBP1.5□□□□□ -2.17
HMGXB4-205ENST00000464480 RNASE3P12724 160 aaKnown RBP1.49□□□□□ -2.17
HMGXB4-205ENST00000464480 COX7BP24311 80 aa1.49□□□□□ -2.17
HMGXB4-205ENST00000464480 SPINK7P58062 85 aa1.49□□□□□ -2.17
HMGXB4-205ENST00000464480 SMIM11BQ8TCY0 68 aa1.49□□□□□ -2.17
HMGXB4-205ENST00000464480 SPAG17Q6Q759 2223 aa1.48□□□□□ -2.17
HMGXB4-205ENST00000464480 POLR2KP53803 58 aaKnown RBP1.48□□□□□ -2.17
HMGXB4-205ENST00000464480 KRTAP12-1P59990 96 aa1.48□□□□□ -2.17
HMGXB4-205ENST00000464480 DEFB103AP81534 67 aa1.48□□□□□ -2.17
HMGXB4-205ENST00000464480 KRTAP26-1Q6PEX3 210 aa1.48□□□□□ -2.17
HMGXB4-205ENST00000464480 SPRR4Q96PI1 79 aa1.48□□□□□ -2.17
HMGXB4-205ENST00000464480 ICE1Q9Y2F5 2266 aa1.47□□□□□ -2.17
HMGXB4-205ENST00000464480 ALPK2Q86TB3 2170 aa1.47□□□□□ -2.17
HMGXB4-205ENST00000464480 CACNA1GO43497 2377 aa1.47□□□□□ -2.17
HMGXB4-205ENST00000464480 COL4A2P08572 1712 aa1.47□□□□□ -2.17
HMGXB4-205ENST00000464480 IGKV3-7A0A075B6H7 116 aa1.47□□□□□ -2.17
HMGXB4-205ENST00000464480 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.47□□□□□ -2.17
HMGXB4-205ENST00000464480 TRBV6-4A0A1B0GX49 114 aa1.47□□□□□ -2.17
HMGXB4-205ENST00000464480 H3BRN7 92 aa1.47□□□□□ -2.17
HMGXB4-205ENST00000464480 LINC00158P58513 81 aa1.47□□□□□ -2.17
HMGXB4-205ENST00000464480 Q6ZTI0 123 aa1.47□□□□□ -2.17
HMGXB4-205ENST00000464480 DEFB131BA0A096LNP1 70 aa1.46□□□□□ -2.18
HMGXB4-205ENST00000464480 TRGV1A0A0A0MS02 117 aa1.46□□□□□ -2.18
HMGXB4-205ENST00000464480 A0A1B0GU69 56 aa1.46□□□□□ -2.18
HMGXB4-205ENST00000464480 PCOTHQ58A44 107 aa1.46□□□□□ -2.18
HMGXB4-205ENST00000464480 MALRD1Q5VYJ5 2156 aa1.46□□□□□ -2.18
HMGXB4-205ENST00000464480 PDE4DIPQ5VU43 2346 aa1.46□□□□□ -2.18
HMGXB4-205ENST00000464480 IGKV3OR2-268A0A0C4DH90 116 aa1.45□□□□□ -2.18
HMGXB4-205ENST00000464480 RPL39P62891 51 aaKnown RBP1.45□□□□□ -2.18
HMGXB4-205ENST00000464480 Q6ZQY7 126 aa1.45□□□□□ -2.18
HMGXB4-205ENST00000464480 C9orf163Q8N9P6 203 aa1.45□□□□□ -2.18
HMGXB4-205ENST00000464480 TMEM167AQ8TBQ9 72 aa1.45□□□□□ -2.18
HMGXB4-205ENST00000464480 RPL39LQ96EH5 51 aaKnown RBP1.45□□□□□ -2.18
HMGXB4-205ENST00000464480 IGKV2-40A0A087WW87 121 aaPredicted RBP1.44□□□□□ -2.18
HMGXB4-205ENST00000464480 LINC00959A0A1B0GUT2 108 aa1.44□□□□□ -2.18
HMGXB4-205ENST00000464480 IGKV2D-40P01614 121 aaPredicted RBP1.44□□□□□ -2.18
HMGXB4-205ENST00000464480 LINC00575Q6W349 94 aa1.44□□□□□ -2.18
HMGXB4-205ENST00000464480 PATE1Q8WXA2 126 aa1.44□□□□□ -2.18
HMGXB4-205ENST00000464480 KNTC1P50748 2209 aa1.43□□□□□ -2.18
HMGXB4-205ENST00000464480 UNC13CQ8NB66 2214 aa1.43□□□□□ -2.18
HMGXB4-205ENST00000464480 A0A0G2JQZ4 141 aa1.43□□□□□ -2.18
HMGXB4-205ENST00000464480 PRB1P04280 392 aa1.43□□□□□ -2.18
HMGXB4-205ENST00000464480 Q8IZM0 81 aa1.43□□□□□ -2.18
HMGXB4-205ENST00000464480 TP53AIP1Q9HCN2 124 aa1.43□□□□□ -2.18
HMGXB4-205ENST00000464480 PRO2289Q9P1D8 64 aa1.43□□□□□ -2.18
HMGXB4-205ENST00000464480 CDKN2A-AS1Q9UH64 79 aa1.43□□□□□ -2.18
HMGXB4-205ENST00000464480 USF3Q68DE3 2245 aa1.42□□□□□ -2.18
HMGXB4-205ENST00000464480 SDK1Q7Z5N4 2213 aa1.42□□□□□ -2.18
HMGXB4-205ENST00000464480 ACYP2P14621 99 aa1.42□□□□□ -2.18
HMGXB4-205ENST00000464480 KRTAP13-4Q3LI77 160 aa1.42□□□□□ -2.18
HMGXB4-205ENST00000464480 RPL39P5Q59GN2 51 aa1.42□□□□□ -2.18
HMGXB4-205ENST00000464480 BAHCC1Q9P281 2608 aa1.42□□□□□ -2.18
HMGXB4-205ENST00000464480 CUL9Q8IWT3 2517 aa1.41□□□□□ -2.18
HMGXB4-205ENST00000464480 ABCA4P78363 2273 aa1.41□□□□□ -2.18
HMGXB4-205ENST00000464480 FBN1P35555 2871 aaKnown RBP1.41□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms