RNA–Protein interactions for RNA: ENST00000464362.5

HPS4-208, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 5

Gene HPS4, Length 4,277 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-208ENST00000464362 Q8IZM0 81 aa6.4□□□□□ -1.38
HPS4-208ENST00000464362 SPTSSBQ8NFR3 76 aa6.4□□□□□ -1.38
HPS4-208ENST00000464362 IGHV4-30-4P0DP06 118 aa6.4□□□□□ -1.39
HPS4-208ENST00000464362 MIFP14174 115 aa6.4□□□□□ -1.39
HPS4-208ENST00000464362 LINC00846Q9NV44 126 aa6.4□□□□□ -1.39
HPS4-208ENST00000464362 SMIM26A0A096LP01 95 aa6.39□□□□□ -1.39
HPS4-208ENST00000464362 FAM218AQ96MZ4 157 aa6.39□□□□□ -1.39
HPS4-208ENST00000464362 TRBV10-3A0A0K0K1G6 114 aa6.39□□□□□ -1.39
HPS4-208ENST00000464362 SYCNQ0VAF6 134 aa6.39□□□□□ -1.39
HPS4-208ENST00000464362 C4orf26Q17RF5 130 aa6.39□□□□□ -1.39
HPS4-208ENST00000464362 Q8N3U1 123 aa6.39□□□□□ -1.39
HPS4-208ENST00000464362 PRR4Q16378 134 aa6.38□□□□□ -1.39
HPS4-208ENST00000464362 FAM19A1Q7Z5A9 133 aa6.38□□□□□ -1.39
HPS4-208ENST00000464362 IGHV3OR16-9A0A0B4J2B5 98 aa6.38□□□□□ -1.39
HPS4-208ENST00000464362 IGLV5-39A0A0G2JS06 123 aa6.38□□□□□ -1.39
HPS4-208ENST00000464362 NANOS2P60321 138 aaKnown RBP6.38□□□□□ -1.39
HPS4-208ENST00000464362 LELP1Q5T871 98 aa6.38□□□□□ -1.39
HPS4-208ENST00000464362 FHL3Q13643 280 aa6.37□□□□□ -1.39
HPS4-208ENST00000464362 STAB1Q9NY15 2570 aa6.37□□□□□ -1.39
HPS4-208ENST00000464362 ZNF73O43830 326 aaPredicted RBP6.37□□□□□ -1.39
HPS4-208ENST00000464362 Q8N814 137 aa6.37□□□□□ -1.39
HPS4-208ENST00000464362 PDE6GP18545 87 aa6.36□□□□□ -1.39
HPS4-208ENST00000464362 ZNF575Q86XF7 245 aa6.36□□□□□ -1.39
HPS4-208ENST00000464362 RELNP78509 3460 aa6.36□□□□□ -1.39
HPS4-208ENST00000464362 IGSF10Q6WRI0 2623 aa6.36□□□□□ -1.39
HPS4-208ENST00000464362 UBE2AP49459 152 aa6.36□□□□□ -1.39
HPS4-208ENST00000464362 CELA1Q9UNI1 258 aa6.36□□□□□ -1.39
HPS4-208ENST00000464362 Q6ZTC4 211 aa6.35□□□□□ -1.39
HPS4-208ENST00000464362 RPS28P62857 69 aaKnown RBP6.35□□□□□ -1.39
HPS4-208ENST00000464362 KIR2DL5BQ8NHK3 375 aa6.34□□□□□ -1.39
HPS4-208ENST00000464362 COL6A5A8TX70 2615 aa6.34□□□□□ -1.39
HPS4-208ENST00000464362 WFDC10BQ8IUB3 73 aa6.34□□□□□ -1.39
HPS4-208ENST00000464362 LITAFQ99732 161 aa6.34□□□□□ -1.39
HPS4-208ENST00000464362 SERP1Q9Y6X1 66 aa6.34□□□□□ -1.39
HPS4-208ENST00000464362 ZANQ9Y493 2812 aa6.34□□□□□ -1.39
HPS4-208ENST00000464362 H0Y9J4 135 aa6.34□□□□□ -1.39
HPS4-208ENST00000464362 SETXQ7Z333 2677 aaKnown RBP6.34□□□□□ -1.4
HPS4-208ENST00000464362 A0A0J9YWU9 116 aa6.33□□□□□ -1.4
HPS4-208ENST00000464362 Q6JHZ5 121 aa6.33□□□□□ -1.4
HPS4-208ENST00000464362 NHLRC4P0CG21 123 aaPredicted RBP6.32□□□□□ -1.4
HPS4-208ENST00000464362 ATP5EP2Q5VTU8 51 aa6.32□□□□□ -1.4
HPS4-208ENST00000464362 WFDC13Q8IUB5 93 aa6.32□□□□□ -1.4
HPS4-208ENST00000464362 M0R378 163 aa6.32□□□□□ -1.4
HPS4-208ENST00000464362 MP68P56378 58 aa6.32□□□□□ -1.4
HPS4-208ENST00000464362 C10orf25Q5T742 122 aa6.32□□□□□ -1.4
HPS4-208ENST00000464362 Q8N9L7 120 aa6.31□□□□□ -1.4
HPS4-208ENST00000464362 COX17Q14061 63 aa6.31□□□□□ -1.4
HPS4-208ENST00000464362 SBSPONQ8IVN8 264 aa6.31□□□□□ -1.4
HPS4-208ENST00000464362 TRBV7-7A0A0K0K1E9 115 aa6.31□□□□□ -1.4
HPS4-208ENST00000464362 LRCOL1A6NCL2 159 aa6.31□□□□□ -1.4
HPS4-208ENST00000464362 IGLV5-45A0A087WSX0 123 aa6.3□□□□□ -1.4
HPS4-208ENST00000464362 PMAIP1Q13794 54 aa6.3□□□□□ -1.4
HPS4-208ENST00000464362 UTP20O75691 2785 aaKnown RBP6.3□□□□□ -1.4
HPS4-208ENST00000464362 KLK9Q2XQG4 91 aa6.3□□□□□ -1.4
HPS4-208ENST00000464362 A0A1B0GUV1 79 aa6.3□□□□□ -1.4
HPS4-208ENST00000464362 H3BQ85 93 aa6.3□□□□□ -1.4
HPS4-208ENST00000464362 CRYGAP11844 174 aa6.3□□□□□ -1.4
HPS4-208ENST00000464362 NDUFC1O43677 76 aa6.29□□□□□ -1.4
HPS4-208ENST00000464362 M0R2N4 97 aa6.28□□□□□ -1.4
HPS4-208ENST00000464362 Q6ZRU5 148 aa6.28□□□□□ -1.4
HPS4-208ENST00000464362 FAM30AQ9NZY2 134 aa6.28□□□□□ -1.4
HPS4-208ENST00000464362 NDUFB1O75438 58 aa6.28□□□□□ -1.4
HPS4-208ENST00000464362 ATP5EP56381 51 aaPredicted RBP6.28□□□□□ -1.4
HPS4-208ENST00000464362 DEFB116Q30KQ4 102 aa6.28□□□□□ -1.4
HPS4-208ENST00000464362 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.28□□□□□ -1.4
HPS4-208ENST00000464362 FAM19A3Q7Z5A8 133 aa6.28□□□□□ -1.4
HPS4-208ENST00000464362 LINC00575Q6W349 94 aa6.27□□□□□ -1.41
HPS4-208ENST00000464362 LYPD5Q6UWN5 251 aa6.27□□□□□ -1.41
HPS4-208ENST00000464362 Q6ZVQ6 151 aa6.27□□□□□ -1.41
HPS4-208ENST00000464362 EGFEM1PQ0D2K5 195 aa6.26□□□□□ -1.41
HPS4-208ENST00000464362 CELSR2Q9HCU4 2923 aa6.26□□□□□ -1.41
HPS4-208ENST00000464362 F8WDY8 70 aa6.26□□□□□ -1.41
HPS4-208ENST00000464362 SMCR5Q8TEV8 140 aa6.25□□□□□ -1.41
HPS4-208ENST00000464362 X6R8D5 127 aa6.25□□□□□ -1.41
HPS4-208ENST00000464362 NSD1Q96L73 2696 aaPredicted RBP6.25□□□□□ -1.41
HPS4-208ENST00000464362 MUC7Q8TAX7 377 aa6.25□□□□□ -1.41
HPS4-208ENST00000464362 C16orf95Q9H693 158 aa6.25□□□□□ -1.41
HPS4-208ENST00000464362 TRAV10A0A0B4J240 114 aa6.24□□□□□ -1.41
HPS4-208ENST00000464362 LINC01547P58512 204 aaPredicted RBP6.24□□□□□ -1.41
HPS4-208ENST00000464362 C1orf137Q5JT78 98 aa6.24□□□□□ -1.41
HPS4-208ENST00000464362 SPINK6Q6UWN8 80 aa6.23□□□□□ -1.41
HPS4-208ENST00000464362 VPS13CQ709C8 3753 aa6.23□□□□□ -1.41
HPS4-208ENST00000464362 NF1P21359 2839 aa6.23□□□□□ -1.41
HPS4-208ENST00000464362 FSHBP01225 129 aa6.23□□□□□ -1.41
HPS4-208ENST00000464362 TRAV7A0A075B6U4 112 aa6.22□□□□□ -1.41
HPS4-208ENST00000464362 IGKV4-1P06312 121 aa6.22□□□□□ -1.41
HPS4-208ENST00000464362 C6orf48Q9UBA6 75 aa6.22□□□□□ -1.41
HPS4-208ENST00000464362 ITPR2Q14571 2701 aa6.22□□□□□ -1.41
HPS4-208ENST00000464362 ZFHX3Q15911 3703 aa6.22□□□□□ -1.41
HPS4-208ENST00000464362 LINC00336Q6ZUF6 198 aa6.21□□□□□ -1.41
HPS4-208ENST00000464362 B9D2Q9BPU9 175 aa6.21□□□□□ -1.41
HPS4-208ENST00000464362 TRBV7-6A0A0J9YX20 115 aa6.21□□□□□ -1.42
HPS4-208ENST00000464362 GIG44P09565 113 aaPredicted RBP6.21□□□□□ -1.42
HPS4-208ENST00000464362 C9orf129Q5T035 196 aaKnown RBP6.21□□□□□ -1.42
HPS4-208ENST00000464362 DHRS4-AS1Q9P1J3 65 aa6.21□□□□□ -1.42
HPS4-208ENST00000464362 IGLV9-49A0A0B4J1Y8 123 aa6.2□□□□□ -1.42
HPS4-208ENST00000464362 WIPF1O43516 503 aa6.2□□□□□ -1.42
HPS4-208ENST00000464362 CHKB-CPT1BH3BT56 60 aa6.2□□□□□ -1.42
HPS4-208ENST00000464362 PRLHP81277 87 aa6.2□□□□□ -1.42
HPS4-208ENST00000464362 CRYBG3Q68DQ2 2970 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms