RNA–Protein interactions for RNA: ENST00000464045.1

THUMPD3-208, Transcript of THUMP domain containing 3, humanhuman

TSL 2

Gene THUMPD3, Length 601 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3-208ENST00000464045 LINC01600Q96MT4 127 aa4.57□□□□□ -1.68
THUMPD3-208ENST00000464045 CHTOPQ9Y3Y2 248 aaKnown RBP4.57□□□□□ -1.68
THUMPD3-208ENST00000464045 TNXBP22105 4242 aa4.56□□□□□ -1.68
THUMPD3-208ENST00000464045 IGLV7-43P04211 117 aa4.56□□□□□ -1.68
THUMPD3-208ENST00000464045 MT1HL1P0DM35 61 aa4.56□□□□□ -1.68
THUMPD3-208ENST00000464045 XAGE1AQ9HD64 81 aa4.56□□□□□ -1.68
THUMPD3-208ENST00000464045 C22orf24Q9Y442 160 aa4.56□□□□□ -1.68
THUMPD3-208ENST00000464045 IGLV5-37A0A075B6J1 123 aa4.55□□□□□ -1.68
THUMPD3-208ENST00000464045 TMEM223A0PJW6 202 aa4.55□□□□□ -1.68
THUMPD3-208ENST00000464045 NUPR1O60356 82 aa4.55□□□□□ -1.68
THUMPD3-208ENST00000464045 SERF1AO75920 110 aa4.55□□□□□ -1.68
THUMPD3-208ENST00000464045 LEPROTL1O95214 131 aa4.55□□□□□ -1.68
THUMPD3-208ENST00000464045 LINC00310P59036 64 aa4.55□□□□□ -1.68
THUMPD3-208ENST00000464045 MRPL55Q7Z7F7 128 aaKnown RBP4.55□□□□□ -1.68
THUMPD3-208ENST00000464045 FAM19A2Q8N3H0 131 aa4.55□□□□□ -1.68
THUMPD3-208ENST00000464045 DIRC1Q969H9 104 aa4.55□□□□□ -1.68
THUMPD3-208ENST00000464045 ZNF625Q96I27 306 aaPredicted RBP4.55□□□□□ -1.68
THUMPD3-208ENST00000464045 HSPB8Q9UJY1 196 aa4.55□□□□□ -1.68
THUMPD3-208ENST00000464045 PLNP26678 52 aa4.54□□□□□ -1.68
THUMPD3-208ENST00000464045 KRTAP11-1Q8IUC1 163 aa4.54□□□□□ -1.68
THUMPD3-208ENST00000464045 ERG28Q9UKR5 140 aa4.54□□□□□ -1.68
THUMPD3-208ENST00000464045 H0Y9J4 135 aa4.53□□□□□ -1.68
THUMPD3-208ENST00000464045 LINC00587B1AMM8 73 aa4.52□□□□□ -1.69
THUMPD3-208ENST00000464045 PFN2P35080 140 aa4.52□□□□□ -1.69
THUMPD3-208ENST00000464045 KRTAP10-8P60410 259 aa4.52□□□□□ -1.69
THUMPD3-208ENST00000464045 HERV-K104P63124 156 aa4.52□□□□□ -1.69
THUMPD3-208ENST00000464045 RPL24P83731 157 aaKnown RBP4.52□□□□□ -1.69
THUMPD3-208ENST00000464045 NKAPP1Q8N9T2 125 aa4.52□□□□□ -1.69
THUMPD3-208ENST00000464045 SND1-IT1Q9HBX3 110 aa4.52□□□□□ -1.69
THUMPD3-208ENST00000464045 H0Y8G0 127 aa4.51□□□□□ -1.69
THUMPD3-208ENST00000464045 ZNF861PO60384 105 aa4.51□□□□□ -1.69
THUMPD3-208ENST00000464045 BCE1O60756 84 aa4.51□□□□□ -1.69
THUMPD3-208ENST00000464045 DPM2O94777 84 aa4.51□□□□□ -1.69
THUMPD3-208ENST00000464045 LINC00167Q96N53 147 aa4.51□□□□□ -1.69
THUMPD3-208ENST00000464045 MYMXA0A1B0GTQ4 84 aa4.5□□□□□ -1.69
THUMPD3-208ENST00000464045 HIST1H2BKO60814 126 aa4.5□□□□□ -1.69
THUMPD3-208ENST00000464045 SCO1O75880 301 aa4.5□□□□□ -1.69
THUMPD3-208ENST00000464045 HIST1H2BJP06899 126 aa4.5□□□□□ -1.69
THUMPD3-208ENST00000464045 VPREB1P12018 145 aa4.5□□□□□ -1.69
THUMPD3-208ENST00000464045 FABP4P15090 132 aa4.5□□□□□ -1.69
THUMPD3-208ENST00000464045 HIST1H2BOP23527 126 aa4.5□□□□□ -1.69
THUMPD3-208ENST00000464045 HIST1H2BBP33778 126 aa4.5□□□□□ -1.69
THUMPD3-208ENST00000464045 RPL28P46779 137 aaKnown RBP4.5□□□□□ -1.69
THUMPD3-208ENST00000464045 LINC00158P58513 81 aa4.5□□□□□ -1.69
THUMPD3-208ENST00000464045 HIST1H2BDP58876 126 aa4.5□□□□□ -1.69
THUMPD3-208ENST00000464045 HERVK_113P61574 105 aa4.5□□□□□ -1.69
THUMPD3-208ENST00000464045 HIST1H2BCP62807 126 aa4.5□□□□□ -1.69
THUMPD3-208ENST00000464045 HIST2H2BEQ16778 126 aa4.5□□□□□ -1.69
THUMPD3-208ENST00000464045 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.5□□□□□ -1.69
THUMPD3-208ENST00000464045 LCE4AQ5TA78 99 aa4.5□□□□□ -1.69
THUMPD3-208ENST00000464045 HIST1H2BHQ93079 126 aa4.5□□□□□ -1.69
THUMPD3-208ENST00000464045 PLEKHB2Q96CS7 222 aa4.5□□□□□ -1.69
THUMPD3-208ENST00000464045 HIST1H2BNQ99877 126 aa4.5□□□□□ -1.69
THUMPD3-208ENST00000464045 HIST1H2BMQ99879 126 aa4.5□□□□□ -1.69
THUMPD3-208ENST00000464045 MAP1LC3CQ9BXW4 147 aa4.5□□□□□ -1.69
THUMPD3-208ENST00000464045 NDUFA12Q9UI09 145 aa4.5□□□□□ -1.69
THUMPD3-208ENST00000464045 IGLV1-50A0A075B6I6 118 aa4.49□□□□□ -1.69
THUMPD3-208ENST00000464045 LEPROTO15243 131 aa4.49□□□□□ -1.69
THUMPD3-208ENST00000464045 IGKCP01834 107 aa4.49□□□□□ -1.69
THUMPD3-208ENST00000464045 NMUP48645 174 aa4.49□□□□□ -1.69
THUMPD3-208ENST00000464045 GAGE10A6NGK3 116 aa4.48□□□□□ -1.69
THUMPD3-208ENST00000464045 RPL37AP8A6NKH3 93 aa4.48□□□□□ -1.69
THUMPD3-208ENST00000464045 ATP6V1G1O75348 118 aa4.48□□□□□ -1.69
THUMPD3-208ENST00000464045 RPL13AP40429 203 aaKnown RBP4.48□□□□□ -1.69
THUMPD3-208ENST00000464045 MEIG1Q5JSS6 88 aa4.48□□□□□ -1.69
THUMPD3-208ENST00000464045 COA6Q5JTJ3 125 aaKnown RBP4.48□□□□□ -1.69
THUMPD3-208ENST00000464045 IGKV2-28A0A075B6P5 120 aa4.47□□□□□ -1.69
THUMPD3-208ENST00000464045 SYS1-DBNDD2H3BUS1 97 aa4.47□□□□□ -1.69
THUMPD3-208ENST00000464045 J3QQQ9 107 aa4.47□□□□□ -1.69
THUMPD3-208ENST00000464045 IGKV2D-28P01615 120 aa4.47□□□□□ -1.69
THUMPD3-208ENST00000464045 KRTAP1-4P0C5Y4 121 aa4.47□□□□□ -1.69
THUMPD3-208ENST00000464045 SMIM13P0DJ93 91 aa4.47□□□□□ -1.69
THUMPD3-208ENST00000464045 KRTAP13-1Q8IUC0 172 aa4.47□□□□□ -1.69
THUMPD3-208ENST00000464045 IGKV2D-26A0A0A0MRZ7 120 aa4.46□□□□□ -1.7
THUMPD3-208ENST00000464045 LOC107984156A0A0G2JMH3 177 aa4.46□□□□□ -1.7
THUMPD3-208ENST00000464045 B5MCH6 92 aa4.46□□□□□ -1.7
THUMPD3-208ENST00000464045 E9PLD3 99 aa4.46□□□□□ -1.7
THUMPD3-208ENST00000464045 M0R378 163 aa4.46□□□□□ -1.7
THUMPD3-208ENST00000464045 LGALS3P17931 250 aaKnown RBP4.46□□□□□ -1.7
THUMPD3-208ENST00000464045 UBE2AP49459 152 aa4.46□□□□□ -1.7
THUMPD3-208ENST00000464045 TSPEAR-AS2P59090 65 aa4.46□□□□□ -1.7
THUMPD3-208ENST00000464045 LINC01545Q5VT33 79 aa4.46□□□□□ -1.7
THUMPD3-208ENST00000464045 PET117Q6UWS5 81 aa4.46□□□□□ -1.7
THUMPD3-208ENST00000464045 ARL17AQ8IVW1 177 aa4.46□□□□□ -1.7
THUMPD3-208ENST00000464045 MIR7-3HGQ8N6C7 128 aa4.46□□□□□ -1.7
THUMPD3-208ENST00000464045 Q8NDZ9 215 aa4.46□□□□□ -1.7
THUMPD3-208ENST00000464045 PMCHL2Q9BQD1 86 aa4.46□□□□□ -1.7
THUMPD3-208ENST00000464045 TMEM126AQ9H061 195 aa4.46□□□□□ -1.7
THUMPD3-208ENST00000464045 A0A0U1RRA0 63 aa4.45□□□□□ -1.7
THUMPD3-208ENST00000464045 BOD1L2Q8IYS8 172 aa4.45□□□□□ -1.7
THUMPD3-208ENST00000464045 PRR26Q8N8Z3 221 aa4.45□□□□□ -1.7
THUMPD3-208ENST00000464045 S100A1P23297 94 aa4.44□□□□□ -1.7
THUMPD3-208ENST00000464045 TRBV10-2A0A0K0K1G8 114 aa4.43□□□□□ -1.7
THUMPD3-208ENST00000464045 TMEM238C9JI98 176 aa4.43□□□□□ -1.7
THUMPD3-208ENST00000464045 PRYO14603 147 aa4.43□□□□□ -1.7
THUMPD3-208ENST00000464045 AKR1D1P51857 326 aa4.43□□□□□ -1.7
THUMPD3-208ENST00000464045 S100A12P80511 92 aa4.43□□□□□ -1.7
THUMPD3-208ENST00000464045 FAM19A1Q7Z5A9 133 aa4.43□□□□□ -1.7
THUMPD3-208ENST00000464045 MIEN1Q9BRT3 115 aa4.43□□□□□ -1.7
THUMPD3-208ENST00000464045 KCNQ1DNQ9H478 68 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms