RNA–Protein interactions for RNA: ENST00000463916.5

XRN1-203, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene XRN1, Length 2,075 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-203ENST00000463916 HIST1H2BJP06899 126 aa7.76□□□□□ -1.17
XRN1-203ENST00000463916 HIST1H2BOP23527 126 aa7.76□□□□□ -1.17
XRN1-203ENST00000463916 HIST1H2BBP33778 126 aa7.76□□□□□ -1.17
XRN1-203ENST00000463916 HIST1H2BDP58876 126 aa7.76□□□□□ -1.17
XRN1-203ENST00000463916 TSPEAR-AS2P59090 65 aa7.76□□□□□ -1.17
XRN1-203ENST00000463916 HIST1H2BCP62807 126 aa7.76□□□□□ -1.17
XRN1-203ENST00000463916 HIST2H2BEQ16778 126 aa7.76□□□□□ -1.17
XRN1-203ENST00000463916 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.76□□□□□ -1.17
XRN1-203ENST00000463916 HIST1H2BHQ93079 126 aa7.76□□□□□ -1.17
XRN1-203ENST00000463916 HIST1H2BNQ99877 126 aa7.76□□□□□ -1.17
XRN1-203ENST00000463916 HIST1H2BMQ99879 126 aa7.76□□□□□ -1.17
XRN1-203ENST00000463916 HSPB8Q9UJY1 196 aa7.76□□□□□ -1.17
XRN1-203ENST00000463916 SMIM13P0DJ93 91 aa7.75□□□□□ -1.17
XRN1-203ENST00000463916 LRP2P98164 4655 aa7.75□□□□□ -1.17
XRN1-203ENST00000463916 IGLV1-50A0A075B6I6 118 aa7.75□□□□□ -1.17
XRN1-203ENST00000463916 KRTAP13-1Q8IUC0 172 aa7.74□□□□□ -1.17
XRN1-203ENST00000463916 NDUFA12Q9UI09 145 aa7.74□□□□□ -1.17
XRN1-203ENST00000463916 TMEM238C9JI98 176 aa7.74□□□□□ -1.17
XRN1-203ENST00000463916 PLNP26678 52 aa7.74□□□□□ -1.17
XRN1-203ENST00000463916 RPL28P46779 137 aaKnown RBP7.74□□□□□ -1.17
XRN1-203ENST00000463916 RPL24P83731 157 aaKnown RBP7.74□□□□□ -1.17
XRN1-203ENST00000463916 DPM2O94777 84 aa7.72□□□□□ -1.17
XRN1-203ENST00000463916 LEPROTO15243 131 aa7.72□□□□□ -1.17
XRN1-203ENST00000463916 MEIG1Q5JSS6 88 aa7.72□□□□□ -1.17
XRN1-203ENST00000463916 MIR7-3HGQ8N6C7 128 aa7.72□□□□□ -1.17
XRN1-203ENST00000463916 IGKCP01834 107 aa7.71□□□□□ -1.17
XRN1-203ENST00000463916 HERV-K104P63124 156 aa7.71□□□□□ -1.17
XRN1-203ENST00000463916 MAP1LC3CQ9BXW4 147 aa7.71□□□□□ -1.17
XRN1-203ENST00000463916 TMEM126AQ9H061 195 aa7.71□□□□□ -1.17
XRN1-203ENST00000463916 MYMXA0A1B0GTQ4 84 aa7.71□□□□□ -1.18
XRN1-203ENST00000463916 M0R378 163 aa7.71□□□□□ -1.18
XRN1-203ENST00000463916 A0A087X002 238 aa7.7□□□□□ -1.18
XRN1-203ENST00000463916 J3QQQ9 107 aa7.7□□□□□ -1.18
XRN1-203ENST00000463916 UBE2AP49459 152 aa7.7□□□□□ -1.18
XRN1-203ENST00000463916 PRLHP81277 87 aa7.7□□□□□ -1.18
XRN1-203ENST00000463916 ANAPC11Q9NYG5 84 aa7.7□□□□□ -1.18
XRN1-203ENST00000463916 ATP6V1G1O75348 118 aa7.69□□□□□ -1.18
XRN1-203ENST00000463916 BOD1L2Q8IYS8 172 aa7.69□□□□□ -1.18
XRN1-203ENST00000463916 DAND5Q8N907 189 aa7.69□□□□□ -1.18
XRN1-203ENST00000463916 SYS1-DBNDD2H3BUS1 97 aa7.69□□□□□ -1.18
XRN1-203ENST00000463916 PLEKHB2Q96CS7 222 aa7.69□□□□□ -1.18
XRN1-203ENST00000463916 FAM19A1Q7Z5A9 133 aa7.67□□□□□ -1.18
XRN1-203ENST00000463916 NCR3O14931 201 aa7.67□□□□□ -1.18
XRN1-203ENST00000463916 RPL13AP40429 203 aaKnown RBP7.67□□□□□ -1.18
XRN1-203ENST00000463916 HERVK_113P61574 105 aa7.67□□□□□ -1.18
XRN1-203ENST00000463916 LINC00587B1AMM8 73 aa7.66□□□□□ -1.18
XRN1-203ENST00000463916 LPAP08519 4548 aa7.66□□□□□ -1.18
XRN1-203ENST00000463916 LGALS3P17931 250 aaKnown RBP7.65□□□□□ -1.18
XRN1-203ENST00000463916 E9PLD3 99 aa7.64□□□□□ -1.19
XRN1-203ENST00000463916 NMUP48645 174 aa7.64□□□□□ -1.19
XRN1-203ENST00000463916 COA6Q5JTJ3 125 aaKnown RBP7.64□□□□□ -1.19
XRN1-203ENST00000463916 LINC01545Q5VT33 79 aa7.64□□□□□ -1.19
XRN1-203ENST00000463916 RNF213Q63HN8 5207 aa7.64□□□□□ -1.19
XRN1-203ENST00000463916 LOC107984156A0A0G2JMH3 177 aa7.64□□□□□ -1.19
XRN1-203ENST00000463916 EIF4EBP3O60516 100 aaPredicted RBP7.64□□□□□ -1.19
XRN1-203ENST00000463916 KRTAP13-2Q52LG2 175 aa7.64□□□□□ -1.19
XRN1-203ENST00000463916 ARL17AQ8IVW1 177 aa7.64□□□□□ -1.19
XRN1-203ENST00000463916 IGKV2D-26A0A0A0MRZ7 120 aa7.63□□□□□ -1.19
XRN1-203ENST00000463916 C3orf79P0CE67 100 aa7.63□□□□□ -1.19
XRN1-203ENST00000463916 CRYGAP11844 174 aa7.63□□□□□ -1.19
XRN1-203ENST00000463916 ADAMTSL4-AS1Q5T5F5 129 aa7.63□□□□□ -1.19
XRN1-203ENST00000463916 A0A0J9YXY3 114 aa7.63□□□□□ -1.19
XRN1-203ENST00000463916 TRBV10-3A0A0K0K1G6 114 aa7.63□□□□□ -1.19
XRN1-203ENST00000463916 PET117Q6UWS5 81 aa7.62□□□□□ -1.19
XRN1-203ENST00000463916 KCNQ1DNQ9H478 68 aa7.62□□□□□ -1.19
XRN1-203ENST00000463916 KRTAP4-16G5E9R7 235 aaPredicted RBP7.61□□□□□ -1.19
XRN1-203ENST00000463916 SPRR1AP35321 89 aa7.61□□□□□ -1.19
XRN1-203ENST00000463916 SOSTDC1Q6X4U4 206 aa7.61□□□□□ -1.19
XRN1-203ENST00000463916 TYMSOSQ8TAI1 123 aa7.61□□□□□ -1.19
XRN1-203ENST00000463916 HIGD2AQ9BW72 106 aa7.61□□□□□ -1.19
XRN1-203ENST00000463916 PRYO14603 147 aa7.61□□□□□ -1.19
XRN1-203ENST00000463916 NPC2P61916 151 aa7.6□□□□□ -1.19
XRN1-203ENST00000463916 TSPAN13O95857 204 aa7.59□□□□□ -1.19
XRN1-203ENST00000463916 KRTDAPP60985 99 aa7.59□□□□□ -1.19
XRN1-203ENST00000463916 FAM229BQ4G0N7 80 aa7.59□□□□□ -1.19
XRN1-203ENST00000463916 TTTY13Q9BZ97 58 aa7.59□□□□□ -1.19
XRN1-203ENST00000463916 LINC00337Q8N6G1 96 aa7.59□□□□□ -1.19
XRN1-203ENST00000463916 LITAFQ99732 161 aa7.59□□□□□ -1.19
XRN1-203ENST00000463916 TRBV10-2A0A0K0K1G8 114 aa7.58□□□□□ -1.2
XRN1-203ENST00000463916 MIEN1Q9BRT3 115 aa7.58□□□□□ -1.2
XRN1-203ENST00000463916 DDTP30046 118 aa7.57□□□□□ -1.2
XRN1-203ENST00000463916 NDUFC2O95298 119 aa7.56□□□□□ -1.2
XRN1-203ENST00000463916 SPRR4Q96PI1 79 aa7.56□□□□□ -1.2
XRN1-203ENST00000463916 SPANXB1Q9NS25 103 aaPredicted RBP7.56□□□□□ -1.2
XRN1-203ENST00000463916 SMCR5Q8TEV8 140 aa7.56□□□□□ -1.2
XRN1-203ENST00000463916 ETDCA0A1B0GVM5 59 aa7.55□□□□□ -1.2
XRN1-203ENST00000463916 IGLV6-57P01721 117 aa7.55□□□□□ -1.2
XRN1-203ENST00000463916 C3orf22Q8N5N4 141 aa7.55□□□□□ -1.2
XRN1-203ENST00000463916 ZNF815PA8K554 130 aa7.55□□□□□ -1.2
XRN1-203ENST00000463916 B5MCH6 92 aa7.55□□□□□ -1.2
XRN1-203ENST00000463916 ATOH7Q8N100 152 aa7.55□□□□□ -1.2
XRN1-203ENST00000463916 PRR4Q16378 134 aa7.54□□□□□ -1.2
XRN1-203ENST00000463916 ERC2-IT1O76042 136 aa7.53□□□□□ -1.2
XRN1-203ENST00000463916 ANKRD39Q53RE8 183 aa7.53□□□□□ -1.2
XRN1-203ENST00000463916 LINC00308Q8TCZ7 52 aa7.53□□□□□ -1.2
XRN1-203ENST00000463916 TIMM17BO60830 172 aa7.53□□□□□ -1.2
XRN1-203ENST00000463916 S100A1P23297 94 aa7.53□□□□□ -1.2
XRN1-203ENST00000463916 S100A7L2Q5SY68 101 aa7.53□□□□□ -1.2
XRN1-203ENST00000463916 Q9BRP9 147 aa7.53□□□□□ -1.2
XRN1-203ENST00000463916 LINC00304Q8N9R0 145 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms