RNA–Protein interactions for RNA: ENST00000463230.5

R3HDM1-213, Transcript of R3H domain containing 1, humanhuman

TSL 2

Gene R3HDM1, Length 2,241 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-213ENST00000463230 PHF5AQ7RTV0 110 aaKnown RBP8.1□□□□□ -1.11
R3HDM1-213ENST00000463230 FAM19A5Q7Z5A7 132 aaPredicted RBP8.1□□□□□ -1.11
R3HDM1-213ENST00000463230 FAM168BA1KXE4 195 aa8.09□□□□□ -1.11
R3HDM1-213ENST00000463230 TP73-AS1Q9UF72 201 aa8.09□□□□□ -1.11
R3HDM1-213ENST00000463230 M0QXV9 152 aa8.09□□□□□ -1.12
R3HDM1-213ENST00000463230 COX17Q14061 63 aa8.09□□□□□ -1.12
R3HDM1-213ENST00000463230 TMEM223A0PJW6 202 aa8.08□□□□□ -1.12
R3HDM1-213ENST00000463230 LBHQ53QV2 105 aaPredicted RBP8.08□□□□□ -1.12
R3HDM1-213ENST00000463230 KRTAP7-1Q8IUC3 87 aa8.07□□□□□ -1.12
R3HDM1-213ENST00000463230 PSORS1C2Q9UIG4 136 aa8.07□□□□□ -1.12
R3HDM1-213ENST00000463230 TSTD3H0UI37 97 aa8.07□□□□□ -1.12
R3HDM1-213ENST00000463230 SRSF9Q13242 221 aaKnown RBP eCLIP8.07□□□□□ -1.12
R3HDM1-213ENST00000463230 PLNP26678 52 aa8.06□□□□□ -1.12
R3HDM1-213ENST00000463230 DDTP30046 118 aa8.06□□□□□ -1.12
R3HDM1-213ENST00000463230 XAGE1AQ9HD64 81 aa8.06□□□□□ -1.12
R3HDM1-213ENST00000463230 ERG28Q9UKR5 140 aa8.06□□□□□ -1.12
R3HDM1-213ENST00000463230 IGLV5-37A0A075B6J1 123 aa8.05□□□□□ -1.12
R3HDM1-213ENST00000463230 REG3GQ6UW15 175 aa8.05□□□□□ -1.12
R3HDM1-213ENST00000463230 ZNF625Q96I27 306 aaPredicted RBP8.05□□□□□ -1.12
R3HDM1-213ENST00000463230 C14orf144Q96I85 54 aa8.05□□□□□ -1.12
R3HDM1-213ENST00000463230 MYCBP2O75592 4640 aa8.05□□□□□ -1.12
R3HDM1-213ENST00000463230 UBE2BP63146 152 aa8.05□□□□□ -1.12
R3HDM1-213ENST00000463230 KRTDAPP60985 99 aa8.04□□□□□ -1.12
R3HDM1-213ENST00000463230 C1orf137Q5JT78 98 aa8.04□□□□□ -1.12
R3HDM1-213ENST00000463230 SERTAD4-AS1Q5TG53 156 aa8.04□□□□□ -1.12
R3HDM1-213ENST00000463230 C22orf24Q9Y442 160 aa8.04□□□□□ -1.12
R3HDM1-213ENST00000463230 MAP1LC3CQ9BXW4 147 aa8.03□□□□□ -1.12
R3HDM1-213ENST00000463230 HERV-K104P63124 156 aa8.03□□□□□ -1.12
R3HDM1-213ENST00000463230 DPM2O94777 84 aa8.02□□□□□ -1.13
R3HDM1-213ENST00000463230 IGLV7-43P04211 117 aa8.02□□□□□ -1.13
R3HDM1-213ENST00000463230 MRPL55Q7Z7F7 128 aaKnown RBP8.02□□□□□ -1.13
R3HDM1-213ENST00000463230 HERVK_113P61574 105 aa8.02□□□□□ -1.13
R3HDM1-213ENST00000463230 PLEKHB2Q96CS7 222 aa8.02□□□□□ -1.13
R3HDM1-213ENST00000463230 H0Y8G0 127 aa8.01□□□□□ -1.13
R3HDM1-213ENST00000463230 PFN2P35080 140 aa8.01□□□□□ -1.13
R3HDM1-213ENST00000463230 PAM16Q9Y3D7 125 aa8.01□□□□□ -1.13
R3HDM1-213ENST00000463230 DIRC1Q969H9 104 aa8.01□□□□□ -1.13
R3HDM1-213ENST00000463230 LINC01600Q96MT4 127 aa8.01□□□□□ -1.13
R3HDM1-213ENST00000463230 LEPROTO15243 131 aa8□□□□□ -1.13
R3HDM1-213ENST00000463230 IGKCP01834 107 aa8□□□□□ -1.13
R3HDM1-213ENST00000463230 KRTAP11-1Q8IUC1 163 aa8□□□□□ -1.13
R3HDM1-213ENST00000463230 NKAPP1Q8N9T2 125 aa8□□□□□ -1.13
R3HDM1-213ENST00000463230 SND1-IT1Q9HBX3 110 aa8□□□□□ -1.13
R3HDM1-213ENST00000463230 MYMXA0A1B0GTQ4 84 aa7.99□□□□□ -1.13
R3HDM1-213ENST00000463230 C3orf79P0CE67 100 aa7.99□□□□□ -1.13
R3HDM1-213ENST00000463230 RPL24P83731 157 aaKnown RBP7.99□□□□□ -1.13
R3HDM1-213ENST00000463230 MT1HL1P0DM35 61 aa7.98□□□□□ -1.13
R3HDM1-213ENST00000463230 NMUP48645 174 aa7.98□□□□□ -1.13
R3HDM1-213ENST00000463230 ATOH7Q8N100 152 aa7.98□□□□□ -1.13
R3HDM1-213ENST00000463230 NDUFA12Q9UI09 145 aa7.98□□□□□ -1.13
R3HDM1-213ENST00000463230 FAT3Q8TDW7 4589 aa7.98□□□□□ -1.13
R3HDM1-213ENST00000463230 LINC00158P58513 81 aa7.98□□□□□ -1.13
R3HDM1-213ENST00000463230 SYS1-DBNDD2H3BUS1 97 aa7.97□□□□□ -1.13
R3HDM1-213ENST00000463230 PET117Q6UWS5 81 aa7.97□□□□□ -1.13
R3HDM1-213ENST00000463230 LINC00167Q96N53 147 aa7.97□□□□□ -1.13
R3HDM1-213ENST00000463230 VAMP8Q9BV40 100 aa7.97□□□□□ -1.13
R3HDM1-213ENST00000463230 VPREB1P12018 145 aa7.97□□□□□ -1.13
R3HDM1-213ENST00000463230 A0A1B0GV90 55 aa7.96□□□□□ -1.14
R3HDM1-213ENST00000463230 H0Y9J4 135 aa7.96□□□□□ -1.14
R3HDM1-213ENST00000463230 J3QQQ9 107 aa7.95□□□□□ -1.14
R3HDM1-213ENST00000463230 MEIG1Q5JSS6 88 aa7.95□□□□□ -1.14
R3HDM1-213ENST00000463230 BCE1O60756 84 aa7.95□□□□□ -1.14
R3HDM1-213ENST00000463230 LINC01545Q5VT33 79 aa7.95□□□□□ -1.14
R3HDM1-213ENST00000463230 ZNF861PO60384 105 aa7.94□□□□□ -1.14
R3HDM1-213ENST00000463230 SMIM13P0DJ93 91 aa7.94□□□□□ -1.14
R3HDM1-213ENST00000463230 LGALS3P17931 250 aaKnown RBP7.94□□□□□ -1.14
R3HDM1-213ENST00000463230 SPATA45Q537H7 98 aa7.94□□□□□ -1.14
R3HDM1-213ENST00000463230 PMCHL2Q9BQD1 86 aa7.94□□□□□ -1.14
R3HDM1-213ENST00000463230 E9PLD3 99 aa7.93□□□□□ -1.14
R3HDM1-213ENST00000463230 RPL28P46779 137 aaKnown RBP7.93□□□□□ -1.14
R3HDM1-213ENST00000463230 TSPEAR-AS2P59090 65 aa7.93□□□□□ -1.14
R3HDM1-213ENST00000463230 SNHG12Q9BXW3 62 aa7.93□□□□□ -1.14
R3HDM1-213ENST00000463230 LRP1Q07954 4544 aaKnown RBP7.93□□□□□ -1.14
R3HDM1-213ENST00000463230 KRTAP10-8P60410 259 aa7.93□□□□□ -1.14
R3HDM1-213ENST00000463230 IGLV1-50A0A075B6I6 118 aa7.91□□□□□ -1.14
R3HDM1-213ENST00000463230 LOC107984156A0A0G2JMH3 177 aa7.91□□□□□ -1.14
R3HDM1-213ENST00000463230 GAGE10A6NGK3 116 aa7.91□□□□□ -1.14
R3HDM1-213ENST00000463230 RPL37AP8A6NKH3 93 aa7.91□□□□□ -1.14
R3HDM1-213ENST00000463230 ARL17AQ8IVW1 177 aa7.91□□□□□ -1.14
R3HDM1-213ENST00000463230 MIR7-3HGQ8N6C7 128 aa7.91□□□□□ -1.14
R3HDM1-213ENST00000463230 M0R378 163 aa7.91□□□□□ -1.14
R3HDM1-213ENST00000463230 MIEN1Q9BRT3 115 aa7.91□□□□□ -1.14
R3HDM1-213ENST00000463230 C20orf202A1L168 122 aa7.9□□□□□ -1.14
R3HDM1-213ENST00000463230 HERC1Q15751 4861 aa7.9□□□□□ -1.14
R3HDM1-213ENST00000463230 IGKV2D-26A0A0A0MRZ7 120 aa7.9□□□□□ -1.15
R3HDM1-213ENST00000463230 A0A0U1RRA0 63 aa7.89□□□□□ -1.15
R3HDM1-213ENST00000463230 BATFQ16520 125 aa7.88□□□□□ -1.15
R3HDM1-213ENST00000463230 M0R143 59 aa7.88□□□□□ -1.15
R3HDM1-213ENST00000463230 KRTAP13-1Q8IUC0 172 aa7.88□□□□□ -1.15
R3HDM1-213ENST00000463230 BOD1L2Q8IYS8 172 aa7.88□□□□□ -1.15
R3HDM1-213ENST00000463230 Q8NDZ9 215 aa7.88□□□□□ -1.15
R3HDM1-213ENST00000463230 IGKV2-28A0A075B6P5 120 aa7.87□□□□□ -1.15
R3HDM1-213ENST00000463230 IGKV2D-28P01615 120 aa7.87□□□□□ -1.15
R3HDM1-213ENST00000463230 UBE2AP49459 152 aa7.87□□□□□ -1.15
R3HDM1-213ENST00000463230 TRBV10-2A0A0K0K1G8 114 aa7.86□□□□□ -1.15
R3HDM1-213ENST00000463230 TIMM17BO60830 172 aa7.86□□□□□ -1.15
R3HDM1-213ENST00000463230 KRTAP1-4P0C5Y4 121 aa7.86□□□□□ -1.15
R3HDM1-213ENST00000463230 RPL13AP40429 203 aaKnown RBP7.86□□□□□ -1.15
R3HDM1-213ENST00000463230 TMEM126AQ9H061 195 aa7.86□□□□□ -1.15
R3HDM1-213ENST00000463230 A0A0J9YXY3 114 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms