RNA–Protein interactions for RNA: ENST00000463147.1

USH2A-203, Transcript of usherin, humanhuman

TSL 2

Gene USH2A, Length 618 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-203ENST00000463147 MYO7BQ6PIF6 2116 aa1.51□□□□□ -2.17
USH2A-203ENST00000463147 IGKV2-40A0A087WW87 121 aaPredicted RBP1.51□□□□□ -2.17
USH2A-203ENST00000463147 TRAV21A0A0B4J279 112 aa1.51□□□□□ -2.17
USH2A-203ENST00000463147 IGIPA6NJ69 53 aa1.51□□□□□ -2.17
USH2A-203ENST00000463147 JMJD7-PLA2G4BH0Y9G9 81 aa1.51□□□□□ -2.17
USH2A-203ENST00000463147 H0YGX0 51 aa1.51□□□□□ -2.17
USH2A-203ENST00000463147 J3QKU1 62 aa1.51□□□□□ -2.17
USH2A-203ENST00000463147 MRPL33O75394 65 aaKnown RBP1.51□□□□□ -2.17
USH2A-203ENST00000463147 IGKV2D-40P01614 121 aaPredicted RBP1.51□□□□□ -2.17
USH2A-203ENST00000463147 MGPP08493 103 aa1.51□□□□□ -2.17
USH2A-203ENST00000463147 SAA2P0DJI9 122 aaPredicted RBP1.51□□□□□ -2.17
USH2A-203ENST00000463147 ENHOQ6UWT2 76 aa1.51□□□□□ -2.17
USH2A-203ENST00000463147 PATE1Q8WXA2 126 aa1.51□□□□□ -2.17
USH2A-203ENST00000463147 NDUFA12Q9UI09 145 aa1.51□□□□□ -2.17
USH2A-203ENST00000463147 ALPK2Q86TB3 2170 aa1.51□□□□□ -2.17
USH2A-203ENST00000463147 WT1-ASQ06250 92 aa1.5□□□□□ -2.17
USH2A-203ENST00000463147 UNQ6190/PRO20217Q6UXQ8 127 aa1.5□□□□□ -2.17
USH2A-203ENST00000463147 LINC00269Q8N2A0 174 aa1.5□□□□□ -2.17
USH2A-203ENST00000463147 OBSCN-AS1Q96MR7 158 aa1.5□□□□□ -2.17
USH2A-203ENST00000463147 BPESC1Q9GZL8 116 aa1.5□□□□□ -2.17
USH2A-203ENST00000463147 MRPL36Q9P0J6 103 aaKnown RBP1.5□□□□□ -2.17
USH2A-203ENST00000463147 MYO7AQ13402 2215 aa1.5□□□□□ -2.17
USH2A-203ENST00000463147 SPAG17Q6Q759 2223 aa1.5□□□□□ -2.17
USH2A-203ENST00000463147 TRBV6-4A0A1B0GX49 114 aa1.49□□□□□ -2.17
USH2A-203ENST00000463147 PRB4P10163 310 aaPredicted RBP1.49□□□□□ -2.17
USH2A-203ENST00000463147 NREPQ16612 68 aa1.49□□□□□ -2.17
USH2A-203ENST00000463147 ATP11AUNQ6ZP68 121 aa1.49□□□□□ -2.17
USH2A-203ENST00000463147 Q8N6K4 173 aa1.49□□□□□ -2.17
USH2A-203ENST00000463147 LINC00308Q8TCZ7 52 aa1.49□□□□□ -2.17
USH2A-203ENST00000463147 RPL39LQ96EH5 51 aaKnown RBP1.49□□□□□ -2.17
USH2A-203ENST00000463147 CYP4F30PQ9H0H9 118 aa1.49□□□□□ -2.17
USH2A-203ENST00000463147 LENEPQ9Y5L5 61 aa1.49□□□□□ -2.17
USH2A-203ENST00000463147 INTS1Q8N201 2190 aaKnown RBP1.49□□□□□ -2.17
USH2A-203ENST00000463147 ARFGEF3Q5TH69 2177 aa1.48□□□□□ -2.17
USH2A-203ENST00000463147 TRBV7-4A0A0J9YYF1 115 aa1.48□□□□□ -2.17
USH2A-203ENST00000463147 I3L2K1 104 aa1.48□□□□□ -2.17
USH2A-203ENST00000463147 NCR3O14931 201 aa1.48□□□□□ -2.17
USH2A-203ENST00000463147 NDUFA1O15239 70 aa1.48□□□□□ -2.17
USH2A-203ENST00000463147 PRB1P04280 392 aa1.48□□□□□ -2.17
USH2A-203ENST00000463147 CCL4P13236 92 aa1.48□□□□□ -2.17
USH2A-203ENST00000463147 PDE6GP18545 87 aa1.48□□□□□ -2.17
USH2A-203ENST00000463147 POLR2KP53803 58 aaKnown RBP1.48□□□□□ -2.17
USH2A-203ENST00000463147 RPL39P62891 51 aaKnown RBP1.48□□□□□ -2.17
USH2A-203ENST00000463147 HAMPP81172 84 aa1.48□□□□□ -2.17
USH2A-203ENST00000463147 WFDC9Q8NEX5 89 aa1.48□□□□□ -2.17
USH2A-203ENST00000463147 SPTSSBQ8NFR3 76 aa1.48□□□□□ -2.17
USH2A-203ENST00000463147 LEAP2Q969E1 77 aa1.48□□□□□ -2.17
USH2A-203ENST00000463147 LIMD2Q9BT23 127 aa1.48□□□□□ -2.17
USH2A-203ENST00000463147 WFDC10AQ9H1F0 79 aa1.48□□□□□ -2.17
USH2A-203ENST00000463147 C22orf24Q9Y442 160 aa1.48□□□□□ -2.17
USH2A-203ENST00000463147 BPTFQ12830 3046 aa1.48□□□□□ -2.17
USH2A-203ENST00000463147 TRAV22A0A0B4J277 110 aa1.47□□□□□ -2.17
USH2A-203ENST00000463147 IGKV3OR2-268A0A0C4DH90 116 aa1.47□□□□□ -2.17
USH2A-203ENST00000463147 HCG22E2RYF7 251 aa1.47□□□□□ -2.17
USH2A-203ENST00000463147 CHKB-CPT1BH3BT56 60 aa1.47□□□□□ -2.17
USH2A-203ENST00000463147 TFF1P04155 84 aa1.47□□□□□ -2.17
USH2A-203ENST00000463147 LOC110117498A0A087WWA1 95 aa1.46□□□□□ -2.18
USH2A-203ENST00000463147 TRBV10-1A0A0K0K1A3 114 aa1.46□□□□□ -2.18
USH2A-203ENST00000463147 IGKV2-29A2NJV5 120 aaPredicted RBP1.46□□□□□ -2.18
USH2A-203ENST00000463147 A6NN06 94 aa1.46□□□□□ -2.18
USH2A-203ENST00000463147 SMIM11BQ8TCY0 68 aa1.46□□□□□ -2.18
USH2A-203ENST00000463147 SDK1Q7Z5N4 2213 aa1.46□□□□□ -2.18
USH2A-203ENST00000463147 UNC13CQ8NB66 2214 aa1.46□□□□□ -2.18
USH2A-203ENST00000463147 SPTY2D1-AS1A0A0U1RR47 76 aa1.45□□□□□ -2.18
USH2A-203ENST00000463147 K7EIM0 57 aa1.45□□□□□ -2.18
USH2A-203ENST00000463147 NDUFB1O75438 58 aa1.45□□□□□ -2.18
USH2A-203ENST00000463147 APELAP0DMC3 54 aa1.45□□□□□ -2.18
USH2A-203ENST00000463147 ELOF1P60002 83 aaKnown RBP1.45□□□□□ -2.18
USH2A-203ENST00000463147 C9orf116Q5BN46 136 aaPredicted RBP1.45□□□□□ -2.18
USH2A-203ENST00000463147 Q5VV11 94 aa1.45□□□□□ -2.18
USH2A-203ENST00000463147 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.45□□□□□ -2.18
USH2A-203ENST00000463147 PRR15LQ9BU68 103 aa1.45□□□□□ -2.18
USH2A-203ENST00000463147 USF3Q68DE3 2245 aa1.45□□□□□ -2.18
USH2A-203ENST00000463147 ESPL1Q14674 2120 aa1.45□□□□□ -2.18
USH2A-203ENST00000463147 KNTC1P50748 2209 aa1.44□□□□□ -2.18
USH2A-203ENST00000463147 MED12Q93074 2177 aa1.44□□□□□ -2.18
USH2A-203ENST00000463147 IGKV3-7A0A075B6H7 116 aa1.44□□□□□ -2.18
USH2A-203ENST00000463147 M0QY20 66 aa1.44□□□□□ -2.18
USH2A-203ENST00000463147 LINC00158P58513 81 aa1.44□□□□□ -2.18
USH2A-203ENST00000463147 ASB16-AS1Q495Z4 193 aa1.44□□□□□ -2.18
USH2A-203ENST00000463147 FAM74A4Q5TZK3 123 aa1.44□□□□□ -2.18
USH2A-203ENST00000463147 DEFB108BQ8NET1 73 aa1.44□□□□□ -2.18
USH2A-203ENST00000463147 DEFB104AQ8WTQ1 72 aa1.44□□□□□ -2.18
USH2A-203ENST00000463147 GAFA1Q96PS6 74 aa1.44□□□□□ -2.18
USH2A-203ENST00000463147 CDKN2A-AS1Q9UH64 79 aa1.44□□□□□ -2.18
USH2A-203ENST00000463147 MUC4Q99102 2169 aa1.43□□□□□ -2.18
USH2A-203ENST00000463147 INE1O15225 51 aa1.43□□□□□ -2.18
USH2A-203ENST00000463147 CCL3L1P16619 93 aa1.43□□□□□ -2.18
USH2A-203ENST00000463147 DEFB133Q30KQ1 61 aa1.43□□□□□ -2.18
USH2A-203ENST00000463147 DEFB114Q30KQ6 69 aa1.43□□□□□ -2.18
USH2A-203ENST00000463147 FDCSPQ8NFU4 85 aa1.43□□□□□ -2.18
USH2A-203ENST00000463147 COX7B2Q8TF08 81 aa1.43□□□□□ -2.18
USH2A-203ENST00000463147 FBN3Q75N90 2809 aa1.43□□□□□ -2.18
USH2A-203ENST00000463147 PI4KAP42356 2102 aa1.42□□□□□ -2.18
USH2A-203ENST00000463147 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.42□□□□□ -2.18
USH2A-203ENST00000463147 LOC101927531A0A1B0GV80 90 aa1.42□□□□□ -2.18
USH2A-203ENST00000463147 ETDCA0A1B0GVM5 59 aa1.42□□□□□ -2.18
USH2A-203ENST00000463147 CLPSL1A2RUU4 121 aa1.42□□□□□ -2.18
USH2A-203ENST00000463147 C10orf142B7Z368 130 aa1.42□□□□□ -2.18
USH2A-203ENST00000463147 M0R2N4 97 aa1.42□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms