RNA–Protein interactions for RNA: ENST00000462391.5

NPM3-202, Transcript of nucleophosmin/nucleoplasmin 3, humanhuman

TSL 3

Gene NPM3, Length 481 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM3-202ENST00000462391 ZNF22P17026 224 aaPredicted RBP12.9□□□□□ -0.34
NPM3-202ENST00000462391 MRPL55Q7Z7F7 128 aaKnown RBP12.89□□□□□ -0.35
NPM3-202ENST00000462391 H0Y8G0 127 aa12.88□□□□□ -0.35
NPM3-202ENST00000462391 PYY3Q5JQD4 70 aa12.88□□□□□ -0.35
NPM3-202ENST00000462391 C20orf202A1L168 122 aa12.86□□□□□ -0.35
NPM3-202ENST00000462391 LINC01545Q5VT33 79 aa12.86□□□□□ -0.35
NPM3-202ENST00000462391 SFTA2Q6UW10 78 aa12.86□□□□□ -0.35
NPM3-202ENST00000462391 TRAV12-1A0A0B4J245 112 aa12.85□□□□□ -0.35
NPM3-202ENST00000462391 C11orf86A6NJI1 115 aa12.85□□□□□ -0.35
NPM3-202ENST00000462391 IGLV5-37A0A075B6J1 123 aa12.84□□□□□ -0.35
NPM3-202ENST00000462391 ZNF861PO60384 105 aa12.84□□□□□ -0.35
NPM3-202ENST00000462391 SMIM6P0DI80 62 aa12.84□□□□□ -0.35
NPM3-202ENST00000462391 IGLV1-50A0A075B6I6 118 aa12.83□□□□□ -0.36
NPM3-202ENST00000462391 TMEM170BQ5T4T1 132 aa12.83□□□□□ -0.36
NPM3-202ENST00000462391 CHTOPQ9Y3Y2 248 aaKnown RBP12.83□□□□□ -0.36
NPM3-202ENST00000462391 COX17Q14061 63 aa12.82□□□□□ -0.36
NPM3-202ENST00000462391 KRTAP1-4P0C5Y4 121 aa12.81□□□□□ -0.36
NPM3-202ENST00000462391 PRR26Q8N8Z3 221 aa12.81□□□□□ -0.36
NPM3-202ENST00000462391 NKAPP1Q8N9T2 125 aa12.81□□□□□ -0.36
NPM3-202ENST00000462391 LINC00167Q96N53 147 aa12.81□□□□□ -0.36
NPM3-202ENST00000462391 PMCHL2Q9BQD1 86 aa12.81□□□□□ -0.36
NPM3-202ENST00000462391 ERG28Q9UKR5 140 aa12.81□□□□□ -0.36
NPM3-202ENST00000462391 BCE1O60756 84 aa12.8□□□□□ -0.36
NPM3-202ENST00000462391 PFN2P35080 140 aa12.8□□□□□ -0.36
NPM3-202ENST00000462391 LINC00518Q8N0U6 118 aa12.8□□□□□ -0.36
NPM3-202ENST00000462391 UBR4Q5T4S7 5183 aa12.79□□□□□ -0.36
NPM3-202ENST00000462391 RPL28P46779 137 aaKnown RBP12.78□□□□□ -0.36
NPM3-202ENST00000462391 C12orf57Q99622 126 aa12.78□□□□□ -0.36
NPM3-202ENST00000462391 RPL37AP8A6NKH3 93 aa12.77□□□□□ -0.37
NPM3-202ENST00000462391 DPM2O94777 84 aa12.77□□□□□ -0.37
NPM3-202ENST00000462391 RPL13AP40429 203 aaKnown RBP12.77□□□□□ -0.37
NPM3-202ENST00000462391 SND1-IT1Q9HBX3 110 aa12.77□□□□□ -0.37
NPM3-202ENST00000462391 GAGE10A6NGK3 116 aa12.76□□□□□ -0.37
NPM3-202ENST00000462391 IGKCP01834 107 aa12.76□□□□□ -0.37
NPM3-202ENST00000462391 ATOH7Q8N100 152 aa12.76□□□□□ -0.37
NPM3-202ENST00000462391 ZNF625Q96I27 306 aaPredicted RBP12.76□□□□□ -0.37
NPM3-202ENST00000462391 TMEM223A0PJW6 202 aa12.75□□□□□ -0.37
NPM3-202ENST00000462391 PLNP26678 52 aa12.74□□□□□ -0.37
NPM3-202ENST00000462391 RPL24P83731 157 aaKnown RBP12.74□□□□□ -0.37
NPM3-202ENST00000462391 S100A12P80511 92 aa12.73□□□□□ -0.37
NPM3-202ENST00000462391 VPREB1P12018 145 aa12.72□□□□□ -0.37
NPM3-202ENST00000462391 VAMP8Q9BV40 100 aa12.71□□□□□ -0.37
NPM3-202ENST00000462391 LRP2P98164 4655 aa12.7□□□□□ -0.38
NPM3-202ENST00000462391 HSBP1L1C9JCN9 74 aa12.69□□□□□ -0.38
NPM3-202ENST00000462391 IGKV2-28A0A075B6P5 120 aa12.68□□□□□ -0.38
NPM3-202ENST00000462391 IGKV2D-28P01615 120 aa12.68□□□□□ -0.38
NPM3-202ENST00000462391 UBE2AP49459 152 aa12.68□□□□□ -0.38
NPM3-202ENST00000462391 LINC00158P58513 81 aa12.68□□□□□ -0.38
NPM3-202ENST00000462391 KRTAP13-1Q8IUC0 172 aa12.67□□□□□ -0.38
NPM3-202ENST00000462391 PAM16Q9Y3D7 125 aa12.67□□□□□ -0.38
NPM3-202ENST00000462391 HERV-K104P63124 156 aa12.66□□□□□ -0.38
NPM3-202ENST00000462391 SPATA45Q537H7 98 aa12.66□□□□□ -0.38
NPM3-202ENST00000462391 LINC00587B1AMM8 73 aa12.64□□□□□ -0.39
NPM3-202ENST00000462391 ANKRD39Q53RE8 183 aa12.63□□□□□ -0.39
NPM3-202ENST00000462391 TMEM126AQ9H061 195 aa12.63□□□□□ -0.39
NPM3-202ENST00000462391 Q8NDZ9 215 aa12.62□□□□□ -0.39
NPM3-202ENST00000462391 CRYGAP11844 174 aa12.61□□□□□ -0.39
NPM3-202ENST00000462391 HERVK_113P61574 105 aa12.61□□□□□ -0.39
NPM3-202ENST00000462391 MEIG1Q5JSS6 88 aa12.61□□□□□ -0.39
NPM3-202ENST00000462391 NDUFA12Q9UI09 145 aa12.61□□□□□ -0.39
NPM3-202ENST00000462391 A0A0U1RRA0 63 aa12.6□□□□□ -0.39
NPM3-202ENST00000462391 MYMXA0A1B0GTQ4 84 aa12.6□□□□□ -0.39
NPM3-202ENST00000462391 SMIM13P0DJ93 91 aa12.6□□□□□ -0.39
NPM3-202ENST00000462391 PRO1933Q9H354 126 aa12.6□□□□□ -0.39
NPM3-202ENST00000462391 TMEM238C9JI98 176 aa12.59□□□□□ -0.39
NPM3-202ENST00000462391 M0R378 163 aa12.59□□□□□ -0.39
NPM3-202ENST00000462391 FAM19A1Q7Z5A9 133 aa12.59□□□□□ -0.39
NPM3-202ENST00000462391 A0A087X002 238 aa12.58□□□□□ -0.4
NPM3-202ENST00000462391 E9PLD3 99 aa12.58□□□□□ -0.4
NPM3-202ENST00000462391 PLEKHB2Q96CS7 222 aa12.58□□□□□ -0.4
NPM3-202ENST00000462391 IGKV2D-26A0A0A0MRZ7 120 aa12.57□□□□□ -0.4
NPM3-202ENST00000462391 PRLHP81277 87 aa12.57□□□□□ -0.4
NPM3-202ENST00000462391 FAM229BQ4G0N7 80 aa12.57□□□□□ -0.4
NPM3-202ENST00000462391 MIR7-3HGQ8N6C7 128 aa12.57□□□□□ -0.4
NPM3-202ENST00000462391 LEPROTO15243 131 aa12.56□□□□□ -0.4
NPM3-202ENST00000462391 BOD1L2Q8IYS8 172 aa12.56□□□□□ -0.4
NPM3-202ENST00000462391 TYMSOSQ8TAI1 123 aa12.56□□□□□ -0.4
NPM3-202ENST00000462391 C14orf144Q96I85 54 aa12.56□□□□□ -0.4
NPM3-202ENST00000462391 NMUP48645 174 aa12.55□□□□□ -0.4
NPM3-202ENST00000462391 COX8AP10176 69 aa12.54□□□□□ -0.4
NPM3-202ENST00000462391 TSTD3H0UI37 97 aa12.53□□□□□ -0.4
NPM3-202ENST00000462391 TSPEAR-AS2P59090 65 aa12.53□□□□□ -0.4
NPM3-202ENST00000462391 J3QQQ9 107 aa12.52□□□□□ -0.41
NPM3-202ENST00000462391 PRYO14603 147 aa12.51□□□□□ -0.41
NPM3-202ENST00000462391 SLC25A34Q6PIV7 304 aa12.51□□□□□ -0.41
NPM3-202ENST00000462391 PCP2Q8IVA1 136 aa12.51□□□□□ -0.41
NPM3-202ENST00000462391 ANAPC11Q9NYG5 84 aa12.51□□□□□ -0.41
NPM3-202ENST00000462391 UQCR10Q9UDW1 63 aa12.51□□□□□ -0.41
NPM3-202ENST00000462391 MIEN1Q9BRT3 115 aa12.5□□□□□ -0.41
NPM3-202ENST00000462391 LOC107984156A0A0G2JMH3 177 aa12.49□□□□□ -0.41
NPM3-202ENST00000462391 DLEU1O43261 78 aa12.49□□□□□ -0.41
NPM3-202ENST00000462391 LGALS3P17931 250 aaKnown RBP12.49□□□□□ -0.41
NPM3-202ENST00000462391 ARL17AQ8IVW1 177 aa12.49□□□□□ -0.41
NPM3-202ENST00000462391 NCR3O14931 201 aa12.48□□□□□ -0.41
NPM3-202ENST00000462391 KRTAP13-2Q52LG2 175 aa12.48□□□□□ -0.41
NPM3-202ENST00000462391 TTTY13Q9BZ97 58 aa12.48□□□□□ -0.41
NPM3-202ENST00000462391 KCNQ1DNQ9H478 68 aa12.48□□□□□ -0.41
NPM3-202ENST00000462391 PRR4Q16378 134 aa12.47□□□□□ -0.41
NPM3-202ENST00000462391 LINC00337Q8N6G1 96 aa12.47□□□□□ -0.41
NPM3-202ENST00000462391 HIGD2AQ9BW72 106 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms