RNA–Protein interactions for RNA: ENST00000462267.1

APP-211, Transcript of amyloid beta precursor protein, humanhuman

TSL 2

Gene APP, Length 667 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-211ENST00000462267 UQCC3Q6UW78 93 aa8.31□□□□□ -1.08
APP-211ENST00000462267 PRELID3AQ96N28 172 aa8.31□□□□□ -1.08
APP-211ENST00000462267 TMEM136Q6ZRR5 245 aa8.3□□□□□ -1.08
APP-211ENST00000462267 FLGP20930 4061 aaPredicted RBP8.29□□□□□ -1.08
APP-211ENST00000462267 COMMD7Q86VX2 200 aa8.29□□□□□ -1.08
APP-211ENST00000462267 CBY1Q9Y3M2 126 aa8.29□□□□□ -1.08
APP-211ENST00000462267 MRPL54Q6P161 138 aaKnown RBP8.28□□□□□ -1.08
APP-211ENST00000462267 LOC389332A0A1B0GUA5 103 aa8.27□□□□□ -1.09
APP-211ENST00000462267 A0A1B0GXF2 115 aa8.27□□□□□ -1.09
APP-211ENST00000462267 ATP5LO75964 103 aa8.27□□□□□ -1.09
APP-211ENST00000462267 ORMDL2Q53FV1 153 aa8.27□□□□□ -1.09
APP-211ENST00000462267 COX6B2Q6YFQ2 88 aa8.27□□□□□ -1.09
APP-211ENST00000462267 SSBP3-AS1Q7Z2R9 100 aa8.27□□□□□ -1.09
APP-211ENST00000462267 SND1-IT1Q9HBX3 110 aa8.27□□□□□ -1.09
APP-211ENST00000462267 LINC00483Q53H64 154 aa8.26□□□□□ -1.09
APP-211ENST00000462267 Q8N8P6 123 aa8.26□□□□□ -1.09
APP-211ENST00000462267 MAP1LC3AQ9H492 121 aa8.26□□□□□ -1.09
APP-211ENST00000462267 LAMTOR2Q9Y2Q5 125 aa8.26□□□□□ -1.09
APP-211ENST00000462267 CHTOPQ9Y3Y2 248 aaKnown RBP8.26□□□□□ -1.09
APP-211ENST00000462267 FCGBPQ9Y6R7 5405 aaPredicted RBP8.25□□□□□ -1.09
APP-211ENST00000462267 PFN2P35080 140 aa8.25□□□□□ -1.09
APP-211ENST00000462267 IGLV5-45A0A087WSX0 123 aa8.24□□□□□ -1.09
APP-211ENST00000462267 TMEM218A2RU14 115 aa8.24□□□□□ -1.09
APP-211ENST00000462267 K7EMI3 77 aa8.24□□□□□ -1.09
APP-211ENST00000462267 MOBPQ13875 183 aa8.24□□□□□ -1.09
APP-211ENST00000462267 TINCRA0A1B0GVN0 87 aa8.23□□□□□ -1.09
APP-211ENST00000462267 ADCYAP1P18509 176 aa8.23□□□□□ -1.09
APP-211ENST00000462267 SMCR5Q8TEV8 140 aa8.23□□□□□ -1.09
APP-211ENST00000462267 TIMM17AQ99595 171 aa8.23□□□□□ -1.09
APP-211ENST00000462267 Q8NDZ9 215 aa8.22□□□□□ -1.09
APP-211ENST00000462267 SEC11CQ9BY50 192 aa8.22□□□□□ -1.09
APP-211ENST00000462267 IGLV9-49A0A0B4J1Y8 123 aa8.21□□□□□ -1.1
APP-211ENST00000462267 SNAPINO95295 136 aa8.21□□□□□ -1.1
APP-211ENST00000462267 SPINK8P0C7L1 97 aa8.21□□□□□ -1.1
APP-211ENST00000462267 G0S2P27469 103 aa8.21□□□□□ -1.1
APP-211ENST00000462267 ANAPC16Q96DE5 110 aa8.21□□□□□ -1.1
APP-211ENST00000462267 MT-ND4LP03901 98 aa8.2□□□□□ -1.1
APP-211ENST00000462267 COX17Q14061 63 aa8.2□□□□□ -1.1
APP-211ENST00000462267 GAGE2AQ6NT46 116 aa8.2□□□□□ -1.1
APP-211ENST00000462267 ATP5L2Q7Z4Y8 100 aa8.19□□□□□ -1.1
APP-211ENST00000462267 LINC00518Q8N0U6 118 aa8.19□□□□□ -1.1
APP-211ENST00000462267 ERG28Q9UKR5 140 aa8.19□□□□□ -1.1
APP-211ENST00000462267 TOMM6Q96B49 74 aa8.18□□□□□ -1.1
APP-211ENST00000462267 MRPL18Q9H0U6 180 aaKnown RBP8.18□□□□□ -1.1
APP-211ENST00000462267 C9orf92A6NGG3 77 aa8.17□□□□□ -1.1
APP-211ENST00000462267 PRYO14603 147 aa8.17□□□□□ -1.1
APP-211ENST00000462267 CFC1P0CG37 223 aa8.17□□□□□ -1.1
APP-211ENST00000462267 C10orf91Q5T1B1 145 aa8.17□□□□□ -1.1
APP-211ENST00000462267 ERASQ7Z444 233 aa8.17□□□□□ -1.1
APP-211ENST00000462267 SPRR1AP35321 89 aa8.16□□□□□ -1.1
APP-211ENST00000462267 NXT2Q9NPJ8 142 aaKnown RBP8.16□□□□□ -1.1
APP-211ENST00000462267 KRTAP4-16G5E9R7 235 aaPredicted RBP8.15□□□□□ -1.1
APP-211ENST00000462267 H3BRM9 83 aa8.15□□□□□ -1.1
APP-211ENST00000462267 PCP4P48539 62 aa8.15□□□□□ -1.1
APP-211ENST00000462267 ETDCA0A1B0GVM5 59 aa8.14□□□□□ -1.11
APP-211ENST00000462267 RHEBQ15382 184 aa8.14□□□□□ -1.11
APP-211ENST00000462267 SCGB3A1Q96QR1 104 aa8.14□□□□□ -1.11
APP-211ENST00000462267 MACF1Q9UPN3 7388 aaKnown RBP8.13□□□□□ -1.11
APP-211ENST00000462267 IGLV5-39A0A0G2JS06 123 aa8.13□□□□□ -1.11
APP-211ENST00000462267 KCNQ1DNQ9H478 68 aa8.13□□□□□ -1.11
APP-211ENST00000462267 CST9LQ9H4G1 147 aa8.13□□□□□ -1.11
APP-211ENST00000462267 PCP4L1A6NKN8 68 aa8.12□□□□□ -1.11
APP-211ENST00000462267 APOC3P02656 99 aa8.12□□□□□ -1.11
APP-211ENST00000462267 SYNE2Q8WXH0 6885 aaKnown RBP8.12□□□□□ -1.11
APP-211ENST00000462267 S100PP25815 95 aa8.11□□□□□ -1.11
APP-211ENST00000462267 SVBPQ8N300 66 aa8.11□□□□□ -1.11
APP-211ENST00000462267 ZNF625Q96I27 306 aaPredicted RBP8.11□□□□□ -1.11
APP-211ENST00000462267 RPS10P5Q9NQ39 176 aa8.11□□□□□ -1.11
APP-211ENST00000462267 TRAV9-1A0A075B6T8 112 aa8.1□□□□□ -1.11
APP-211ENST00000462267 HSBP1L1C9JCN9 74 aa8.1□□□□□ -1.11
APP-211ENST00000462267 C21orf62-AS1Q17RA5 79 aa8.1□□□□□ -1.11
APP-211ENST00000462267 ERC2-IT1O76042 136 aa8.09□□□□□ -1.11
APP-211ENST00000462267 IGLV6-57P01721 117 aa8.09□□□□□ -1.11
APP-211ENST00000462267 SFTA2Q6UW10 78 aa8.09□□□□□ -1.11
APP-211ENST00000462267 LINC01549A6NIU2 74 aa8.08□□□□□ -1.12
APP-211ENST00000462267 PMVKQ15126 192 aa8.08□□□□□ -1.12
APP-211ENST00000462267 C9orf153Q5TBE3 101 aa8.08□□□□□ -1.12
APP-211ENST00000462267 KRTAP19-1Q8IUB9 90 aa8.08□□□□□ -1.12
APP-211ENST00000462267 LIMD2Q9BT23 127 aa8.08□□□□□ -1.12
APP-211ENST00000462267 B5MCH6 92 aa8.06□□□□□ -1.12
APP-211ENST00000462267 LINC00158P58513 81 aa8.06□□□□□ -1.12
APP-211ENST00000462267 KRTAP9-8Q9BYQ0 159 aa8.06□□□□□ -1.12
APP-211ENST00000462267 RPL37P61927 97 aaKnown RBP8.05□□□□□ -1.12
APP-211ENST00000462267 COX19Q49B96 90 aa8.04□□□□□ -1.12
APP-211ENST00000462267 NCR3O14931 201 aa8.03□□□□□ -1.12
APP-211ENST00000462267 IGLC3P0DOY3 106 aa8.03□□□□□ -1.12
APP-211ENST00000462267 BOD1L2Q8IYS8 172 aa8.03□□□□□ -1.12
APP-211ENST00000462267 TRBV10-3A0A0K0K1G6 114 aa8.02□□□□□ -1.13
APP-211ENST00000462267 Q9BRP9 147 aa8.02□□□□□ -1.13
APP-211ENST00000462267 ZNF22P17026 224 aaPredicted RBP8.01□□□□□ -1.13
APP-211ENST00000462267 Q6ZRX8 168 aa8□□□□□ -1.13
APP-211ENST00000462267 A0A0U1RRA0 63 aa7.99□□□□□ -1.13
APP-211ENST00000462267 Q6Q795 121 aa7.99□□□□□ -1.13
APP-211ENST00000462267 SMCO4Q9NRQ5 59 aa7.98□□□□□ -1.13
APP-211ENST00000462267 LINC01546A6NGU7 62 aa7.97□□□□□ -1.13
APP-211ENST00000462267 KIAA1644Q3SXP7 199 aa7.97□□□□□ -1.13
APP-211ENST00000462267 HRCT1Q6UXD1 115 aa7.97□□□□□ -1.13
APP-211ENST00000462267 YPEL4Q96NS1 127 aa7.96□□□□□ -1.14
APP-211ENST00000462267 C12orf57Q99622 126 aa7.96□□□□□ -1.14
APP-211ENST00000462267 LINC00587B1AMM8 73 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 88.4 ms