RNA–Protein interactions for RNA: ENST00000462254.1

CSMD3-205, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 2

Gene CSMD3, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-205ENST00000462254 PKIGQ9Y2B9 76 aa3.04□□□□□ -1.92
CSMD3-205ENST00000462254 ZNF706Q9Y5V0 76 aaPredicted RBP3.04□□□□□ -1.92
CSMD3-205ENST00000462254 LYSTQ99698 3801 aa3.04□□□□□ -1.92
CSMD3-205ENST00000462254 IGLV4-69A0A075B6H9 119 aa3.03□□□□□ -1.92
CSMD3-205ENST00000462254 A0A087WX48 190 aa3.03□□□□□ -1.92
CSMD3-205ENST00000462254 TRAV12-1A0A0B4J245 112 aa3.03□□□□□ -1.92
CSMD3-205ENST00000462254 IGKV3OR2-268A0A0C4DH90 116 aa3.03□□□□□ -1.92
CSMD3-205ENST00000462254 A0A1B0GV90 55 aa3.03□□□□□ -1.92
CSMD3-205ENST00000462254 TMEM262E9PQX1 116 aa3.03□□□□□ -1.92
CSMD3-205ENST00000462254 ANGP03950 147 aaKnown RBP3.03□□□□□ -1.92
CSMD3-205ENST00000462254 DNAH10OSP0CZ25 163 aa3.03□□□□□ -1.92
CSMD3-205ENST00000462254 UBE2D1P51668 147 aa3.03□□□□□ -1.92
CSMD3-205ENST00000462254 C14orf177Q52M58 125 aa3.03□□□□□ -1.92
CSMD3-205ENST00000462254 PYY3Q5JQD4 70 aa3.03□□□□□ -1.92
CSMD3-205ENST00000462254 LINC01556Q5JQF7 62 aa3.03□□□□□ -1.92
CSMD3-205ENST00000462254 C9orf129Q5T035 196 aaKnown RBP3.03□□□□□ -1.92
CSMD3-205ENST00000462254 LINC01545Q5VT33 79 aa3.03□□□□□ -1.92
CSMD3-205ENST00000462254 LGALS9CQ6DKI2 356 aa3.03□□□□□ -1.92
CSMD3-205ENST00000462254 UBE2DNLQ8IWF7 75 aa3.03□□□□□ -1.92
CSMD3-205ENST00000462254 PMCHL2Q9BQD1 86 aa3.03□□□□□ -1.92
CSMD3-205ENST00000462254 SND1-IT1Q9HBX3 110 aa3.03□□□□□ -1.92
CSMD3-205ENST00000462254 C8orf17Q9NRJ1 99 aa3.03□□□□□ -1.92
CSMD3-205ENST00000462254 MRPL35Q9NZE8 188 aaKnown RBP3.03□□□□□ -1.92
CSMD3-205ENST00000462254 KLK12Q9UKR0 248 aa3.03□□□□□ -1.92
CSMD3-205ENST00000462254 LINC00959A0A1B0GUT2 108 aa3.02□□□□□ -1.93
CSMD3-205ENST00000462254 A0A1B0GVX0 72 aa3.02□□□□□ -1.93
CSMD3-205ENST00000462254 C11orf86A6NJI1 115 aa3.02□□□□□ -1.93
CSMD3-205ENST00000462254 F8VRH5 84 aa3.02□□□□□ -1.93
CSMD3-205ENST00000462254 C3orf84H3BNL1 204 aa3.02□□□□□ -1.93
CSMD3-205ENST00000462254 BPY2O14599 106 aa3.02□□□□□ -1.93
CSMD3-205ENST00000462254 SCGB1A1P11684 91 aa3.02□□□□□ -1.93
CSMD3-205ENST00000462254 COX6A2Q02221 97 aa3.02□□□□□ -1.93
CSMD3-205ENST00000462254 ENHOQ6UWT2 76 aa3.02□□□□□ -1.93
CSMD3-205ENST00000462254 ATOH7Q8N100 152 aa3.02□□□□□ -1.93
CSMD3-205ENST00000462254 LINC00269Q8N2A0 174 aa3.02□□□□□ -1.93
CSMD3-205ENST00000462254 C15orf56Q8N910 161 aa3.02□□□□□ -1.93
CSMD3-205ENST00000462254 CST9LQ9H4G1 147 aa3.02□□□□□ -1.93
CSMD3-205ENST00000462254 PRR34Q9NV39 138 aa3.02□□□□□ -1.93
CSMD3-205ENST00000462254 VPS13DQ5THJ4 4388 aa3.02□□□□□ -1.93
CSMD3-205ENST00000462254 DNAH1Q9P2D7 4330 aa3.02□□□□□ -1.93
CSMD3-205ENST00000462254 IGLV10-54A0A075B6I4 117 aa3.01□□□□□ -1.93
CSMD3-205ENST00000462254 TRAV13-1A0A0B4J241 112 aa3.01□□□□□ -1.93
CSMD3-205ENST00000462254 FAM236DA0A1B0GTK5 79 aa3.01□□□□□ -1.93
CSMD3-205ENST00000462254 FAM168BA1KXE4 195 aa3.01□□□□□ -1.93
CSMD3-205ENST00000462254 DLEU1O43261 78 aa3.01□□□□□ -1.93
CSMD3-205ENST00000462254 IGKCP01834 107 aa3.01□□□□□ -1.93
CSMD3-205ENST00000462254 IGLC3P0DOY3 106 aa3.01□□□□□ -1.93
CSMD3-205ENST00000462254 FAM236CP0DP71 79 aa3.01□□□□□ -1.93
CSMD3-205ENST00000462254 ZNF22P17026 224 aaPredicted RBP3.01□□□□□ -1.93
CSMD3-205ENST00000462254 HERVK_113P63121 156 aa3.01□□□□□ -1.93
CSMD3-205ENST00000462254 COL5A1-AS1Q5SY13 56 aa3.01□□□□□ -1.93
CSMD3-205ENST00000462254 KRTAP26-1Q6PEX3 210 aa3.01□□□□□ -1.93
CSMD3-205ENST00000462254 TYMSOSQ8TAI1 123 aa3.01□□□□□ -1.93
CSMD3-205ENST00000462254 UBE2WQ96B02 151 aa3.01□□□□□ -1.93
CSMD3-205ENST00000462254 ALMS1Q8TCU4 4167 aa3□□□□□ -1.93
CSMD3-205ENST00000462254 C20orf202A1L168 122 aa3□□□□□ -1.93
CSMD3-205ENST00000462254 IBA57-AS1B1ANH7 110 aa3□□□□□ -1.93
CSMD3-205ENST00000462254 CCL25O15444 150 aa3□□□□□ -1.93
CSMD3-205ENST00000462254 DPM2O94777 84 aa3□□□□□ -1.93
CSMD3-205ENST00000462254 CRPP02741 224 aa3□□□□□ -1.93
CSMD3-205ENST00000462254 SS18Q15532 418 aa3□□□□□ -1.93
CSMD3-205ENST00000462254 KRTAP7-1Q8IUC3 87 aa3□□□□□ -1.93
CSMD3-205ENST00000462254 PCP2Q8IVA1 136 aa3□□□□□ -1.93
CSMD3-205ENST00000462254 CDKN2A-AS1Q9UH64 79 aa3□□□□□ -1.93
CSMD3-205ENST00000462254 DNAH6Q9C0G6 4158 aa3□□□□□ -1.93
CSMD3-205ENST00000462254 NBDYA0A0U1RRE5 68 aa2.99□□□□□ -1.93
CSMD3-205ENST00000462254 TMEM223A0PJW6 202 aa2.99□□□□□ -1.93
CSMD3-205ENST00000462254 APOMO95445 188 aa2.99□□□□□ -1.93
CSMD3-205ENST00000462254 LY6G6CO95867 125 aa2.99□□□□□ -1.93
CSMD3-205ENST00000462254 TLX1NBP0CAT3 122 aa2.99□□□□□ -1.93
CSMD3-205ENST00000462254 PLNP26678 52 aa2.99□□□□□ -1.93
CSMD3-205ENST00000462254 XCL1P47992 114 aa2.99□□□□□ -1.93
CSMD3-205ENST00000462254 MIAQ16674 131 aa2.99□□□□□ -1.93
CSMD3-205ENST00000462254 TMEM170BQ5T4T1 132 aa2.99□□□□□ -1.93
CSMD3-205ENST00000462254 C10orf126Q8N4M7 172 aa2.99□□□□□ -1.93
CSMD3-205ENST00000462254 MIEN1Q9BRT3 115 aa2.99□□□□□ -1.93
CSMD3-205ENST00000462254 IGHV3-64A0A075B6Q5 118 aa2.98□□□□□ -1.93
CSMD3-205ENST00000462254 IGKV2D-24A0A075B6R9 120 aa2.98□□□□□ -1.93
CSMD3-205ENST00000462254 IGKV2D-26A0A0A0MRZ7 120 aa2.98□□□□□ -1.93
CSMD3-205ENST00000462254 K7EP13 123 aa2.98□□□□□ -1.93
CSMD3-205ENST00000462254 M0R2N4 97 aa2.98□□□□□ -1.93
CSMD3-205ENST00000462254 SPINK8P0C7L1 97 aa2.98□□□□□ -1.93
CSMD3-205ENST00000462254 LINC00313P59037 77 aa2.98□□□□□ -1.93
CSMD3-205ENST00000462254 TSPEAR-AS2P59090 65 aa2.98□□□□□ -1.93
CSMD3-205ENST00000462254 SEC11AP67812 179 aa2.98□□□□□ -1.93
CSMD3-205ENST00000462254 LCE1FQ5T754 118 aa2.98□□□□□ -1.93
CSMD3-205ENST00000462254 Q6ZR54 194 aa2.98□□□□□ -1.93
CSMD3-205ENST00000462254 Q6ZRN7 208 aaPredicted RBP2.98□□□□□ -1.93
CSMD3-205ENST00000462254 C5orf38Q86SI9 138 aa2.98□□□□□ -1.93
CSMD3-205ENST00000462254 TTTY13Q9BZ97 58 aa2.98□□□□□ -1.93
CSMD3-205ENST00000462254 PRO1933Q9H354 126 aa2.98□□□□□ -1.93
CSMD3-205ENST00000462254 TP73-AS1Q9UF72 201 aa2.98□□□□□ -1.93
CSMD3-205ENST00000462254 KMT2AQ03164 3969 aa2.97□□□□□ -1.93
CSMD3-205ENST00000462254 HYDINQ4G0P3 5121 aa2.97□□□□□ -1.93
CSMD3-205ENST00000462254 DNAH10Q8IVF4 4471 aa2.97□□□□□ -1.93
CSMD3-205ENST00000462254 SPATA45Q537H7 98 aa2.97□□□□□ -1.93
CSMD3-205ENST00000462254 VAMP8Q9BV40 100 aa2.97□□□□□ -1.93
CSMD3-205ENST00000462254 SS18L2Q9UHA2 77 aa2.97□□□□□ -1.93
CSMD3-205ENST00000462254 IGHV1-58A0A0C4DH39 117 aa2.96□□□□□ -1.94
CSMD3-205ENST00000462254 LCE6AA0A183 80 aa2.96□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms