RNA–Protein interactions for RNA: ENST00000462212.5

ITSN1-222, Transcript of intersectin 1, human

TSL 1 (best)

Gene ITSN1, Length 1,102 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ITSN1-222	ENST00000462212	C22orf24	Q9Y442	160 aa		5.1	□□□□□ -1.59
ITSN1-222	ENST00000462212	TMEM223	A0PJW6	202 aa		5.09	□□□□□ -1.59
ITSN1-222	ENST00000462212	UBE2B	P63146	152 aa		5.09	□□□□□ -1.59
ITSN1-222	ENST00000462212	SFTA2	Q6UW10	78 aa		5.09	□□□□□ -1.59
ITSN1-222	ENST00000462212	ZNF625	Q96I27	306 aa	Predicted RBP	5.09	□□□□□ -1.59
ITSN1-222	ENST00000462212	IGLV5-37	A0A075B6J1	123 aa		5.08	□□□□□ -1.6
ITSN1-222	ENST00000462212	TMEM238L	A0A1B0GVL6	79 aa		5.08	□□□□□ -1.6
ITSN1-222	ENST00000462212	NUPR1	O60356	82 aa		5.08	□□□□□ -1.6
ITSN1-222	ENST00000462212	LEPROTL1	O95214	131 aa		5.08	□□□□□ -1.6
ITSN1-222	ENST00000462212	KRTAP10-8	P60410	259 aa		5.08	□□□□□ -1.6
ITSN1-222	ENST00000462212	COX17	Q14061	63 aa		5.08	□□□□□ -1.6
ITSN1-222	ENST00000462212	MRPL55	Q7Z7F7	128 aa	Known RBP	5.08	□□□□□ -1.6
ITSN1-222	ENST00000462212	ERG28	Q9UKR5	140 aa		5.08	□□□□□ -1.6
ITSN1-222	ENST00000462212	HMCN2	Q8NDA2	5059 aa		5.08	□□□□□ -1.6
ITSN1-222	ENST00000462212	DIRC1	Q969H9	104 aa		5.07	□□□□□ -1.6
ITSN1-222	ENST00000462212		H0Y9J4	135 aa		5.06	□□□□□ -1.6
ITSN1-222	ENST00000462212	PFN2	P35080	140 aa		5.06	□□□□□ -1.6
ITSN1-222	ENST00000462212	LINC00167	Q96N53	147 aa		5.06	□□□□□ -1.6
ITSN1-222	ENST00000462212	SND1-IT1	Q9HBX3	110 aa		5.06	□□□□□ -1.6
ITSN1-222	ENST00000462212	HSPB8	Q9UJY1	196 aa		5.06	□□□□□ -1.6
ITSN1-222	ENST00000462212	HIST1H2BK	O60814	126 aa		5.05	□□□□□ -1.6
ITSN1-222	ENST00000462212	HIST1H2BJ	P06899	126 aa		5.05	□□□□□ -1.6
ITSN1-222	ENST00000462212	HIST1H2BO	P23527	126 aa		5.05	□□□□□ -1.6
ITSN1-222	ENST00000462212	HIST1H2BB	P33778	126 aa		5.05	□□□□□ -1.6
ITSN1-222	ENST00000462212	HIST1H2BD	P58876	126 aa		5.05	□□□□□ -1.6
ITSN1-222	ENST00000462212	HIST1H2BC	P62807	126 aa		5.05	□□□□□ -1.6
ITSN1-222	ENST00000462212	HIST2H2BE	Q16778	126 aa		5.05	□□□□□ -1.6
ITSN1-222	ENST00000462212	HIST2H2BF	Q5QNW6	126 aa	Predicted RBP	5.05	□□□□□ -1.6
ITSN1-222	ENST00000462212	HIST1H2BH	Q93079	126 aa		5.05	□□□□□ -1.6
ITSN1-222	ENST00000462212	HIST1H2BN	Q99877	126 aa		5.05	□□□□□ -1.6
ITSN1-222	ENST00000462212	HIST1H2BM	Q99879	126 aa		5.05	□□□□□ -1.6
ITSN1-222	ENST00000462212		H0Y8G0	127 aa		5.04	□□□□□ -1.6
ITSN1-222	ENST00000462212	ZNF861P	O60384	105 aa		5.04	□□□□□ -1.6
ITSN1-222	ENST00000462212	KRTAP1-4	P0C5Y4	121 aa		5.04	□□□□□ -1.6
ITSN1-222	ENST00000462212	VPREB1	P12018	145 aa		5.04	□□□□□ -1.6
ITSN1-222	ENST00000462212	PLN	P26678	52 aa		5.04	□□□□□ -1.6
ITSN1-222	ENST00000462212	NKAPP1	Q8N9T2	125 aa		5.04	□□□□□ -1.6
ITSN1-222	ENST00000462212	RPL37AP8	A6NKH3	93 aa		5.03	□□□□□ -1.6
ITSN1-222	ENST00000462212	FABP4	P15090	132 aa		5.03	□□□□□ -1.6
ITSN1-222	ENST00000462212	C21orf62-AS1	Q17RA5	79 aa		5.03	□□□□□ -1.6
ITSN1-222	ENST00000462212	PYY3	Q5JQD4	70 aa		5.03	□□□□□ -1.6
ITSN1-222	ENST00000462212		Q8NDZ9	215 aa		5.03	□□□□□ -1.6
ITSN1-222	ENST00000462212	UBR4	Q5T4S7	5183 aa		5.03	□□□□□ -1.6
ITSN1-222	ENST00000462212	GAGE10	A6NGK3	116 aa		5.02	□□□□□ -1.61
ITSN1-222	ENST00000462212		M0R143	59 aa		5.02	□□□□□ -1.61
ITSN1-222	ENST00000462212	DLEU1	O43261	78 aa		5.02	□□□□□ -1.61
ITSN1-222	ENST00000462212	BCE1	O60756	84 aa		5.02	□□□□□ -1.61
ITSN1-222	ENST00000462212	DPM2	O94777	84 aa		5.02	□□□□□ -1.61
ITSN1-222	ENST00000462212	TSPEAR-AS2	P59090	65 aa		5.02	□□□□□ -1.61
ITSN1-222	ENST00000462212	HERV-K104	P63124	156 aa		5.02	□□□□□ -1.61
ITSN1-222	ENST00000462212	RPL24	P83731	157 aa	Known RBP	5.02	□□□□□ -1.61
ITSN1-222	ENST00000462212	KRTAP13-1	Q8IUC0	172 aa		5.02	□□□□□ -1.61
ITSN1-222	ENST00000462212	NDUFA12	Q9UI09	145 aa		5.02	□□□□□ -1.61
ITSN1-222	ENST00000462212	IGLV1-50	A0A075B6I6	118 aa		5.01	□□□□□ -1.61
ITSN1-222	ENST00000462212	MYMX	A0A1B0GTQ4	84 aa		5.01	□□□□□ -1.61
ITSN1-222	ENST00000462212	HSBP1L1	C9JCN9	74 aa		5.01	□□□□□ -1.61
ITSN1-222	ENST00000462212	LEPROT	O15243	131 aa		5.01	□□□□□ -1.61
ITSN1-222	ENST00000462212	IGKC	P01834	107 aa		5.01	□□□□□ -1.61
ITSN1-222	ENST00000462212	SMIM13	P0DJ93	91 aa		5.01	□□□□□ -1.61
ITSN1-222	ENST00000462212	LINC00158	P58513	81 aa		5.01	□□□□□ -1.61
ITSN1-222	ENST00000462212	COA6	Q5JTJ3	125 aa	Known RBP	5.01	□□□□□ -1.61
ITSN1-222	ENST00000462212	PLEKHB2	Q96CS7	222 aa		5.01	□□□□□ -1.61
ITSN1-222	ENST00000462212	PMCHL2	Q9BQD1	86 aa		5.01	□□□□□ -1.61
ITSN1-222	ENST00000462212	MAP1LC3C	Q9BXW4	147 aa		5.01	□□□□□ -1.61
ITSN1-222	ENST00000462212	IGKV2-28	A0A075B6P5	120 aa		5	□□□□□ -1.61
ITSN1-222	ENST00000462212	SYS1-DBNDD2	H3BUS1	97 aa		5	□□□□□ -1.61
ITSN1-222	ENST00000462212		J3QQQ9	107 aa		5	□□□□□ -1.61
ITSN1-222	ENST00000462212	IGKV2D-28	P01615	120 aa		5	□□□□□ -1.61
ITSN1-222	ENST00000462212	RPL28	P46779	137 aa	Known RBP	5	□□□□□ -1.61
ITSN1-222	ENST00000462212	JOSD1	Q15040	202 aa	Predicted RBP	5	□□□□□ -1.61
ITSN1-222	ENST00000462212	XP32	Q5T750	250 aa		5	□□□□□ -1.61
ITSN1-222	ENST00000462212	MIR7-3HG	Q8N6C7	128 aa		5	□□□□□ -1.61
ITSN1-222	ENST00000462212	PRR26	Q8N8Z3	221 aa		5	□□□□□ -1.61
ITSN1-222	ENST00000462212		A0A0U1RRA0	63 aa		4.99	□□□□□ -1.61
ITSN1-222	ENST00000462212	NMU	P48645	174 aa		4.99	□□□□□ -1.61
ITSN1-222	ENST00000462212	HERVK_113	P61574	105 aa		4.99	□□□□□ -1.61
ITSN1-222	ENST00000462212	MEIG1	Q5JSS6	88 aa		4.99	□□□□□ -1.61
ITSN1-222	ENST00000462212	HIST3H2BB	Q8N257	126 aa		4.99	□□□□□ -1.61
ITSN1-222	ENST00000462212	LOC107984156	A0A0G2JMH3	177 aa		4.98	□□□□□ -1.61
ITSN1-222	ENST00000462212		M0R378	163 aa		4.98	□□□□□ -1.61
ITSN1-222	ENST00000462212	LINC01545	Q5VT33	79 aa		4.98	□□□□□ -1.61
ITSN1-222	ENST00000462212	ARL17A	Q8IVW1	177 aa		4.98	□□□□□ -1.61
ITSN1-222	ENST00000462212	TMEM126A	Q9H061	195 aa		4.98	□□□□□ -1.61
ITSN1-222	ENST00000462212	IGKV2D-26	A0A0A0MRZ7	120 aa		4.97	□□□□□ -1.61
ITSN1-222	ENST00000462212	TMEM238	C9JI98	176 aa		4.97	□□□□□ -1.61
ITSN1-222	ENST00000462212		E9PLD3	99 aa		4.97	□□□□□ -1.61
ITSN1-222	ENST00000462212	LGALS3	P17931	250 aa	Known RBP	4.97	□□□□□ -1.61
ITSN1-222	ENST00000462212	RPL13A	P40429	203 aa	Known RBP	4.97	□□□□□ -1.61
ITSN1-222	ENST00000462212	UBE2A	P49459	152 aa		4.97	□□□□□ -1.61
ITSN1-222	ENST00000462212	PET117	Q6UWS5	81 aa		4.97	□□□□□ -1.61
ITSN1-222	ENST00000462212	BOD1L2	Q8IYS8	172 aa		4.97	□□□□□ -1.61
ITSN1-222	ENST00000462212	C3orf79	P0CE67	100 aa		4.96	□□□□□ -1.62
ITSN1-222	ENST00000462212	PRO1933	Q9H354	126 aa		4.96	□□□□□ -1.62
ITSN1-222	ENST00000462212	SPRR1A	P35321	89 aa		4.95	□□□□□ -1.62
ITSN1-222	ENST00000462212	PRLH	P81277	87 aa		4.95	□□□□□ -1.62
ITSN1-222	ENST00000462212	FAM19A1	Q7Z5A9	133 aa		4.95	□□□□□ -1.62
ITSN1-222	ENST00000462212	DAND5	Q8N907	189 aa		4.95	□□□□□ -1.62
ITSN1-222	ENST00000462212	KCNQ1DN	Q9H478	68 aa		4.95	□□□□□ -1.62
ITSN1-222	ENST00000462212		A0A087X002	238 aa		4.94	□□□□□ -1.62
ITSN1-222	ENST00000462212		A0A0J9YXY3	114 aa		4.94	□□□□□ -1.62

Retrieved 100 of 20,778 RNA–protein pairs in 45 ms