RNA–Protein interactions for RNA: ENST00000461194.5

NUP50-212, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-212ENST00000461194 NOTCH2NLQ7Z3S9 236 aa4.26□□□□□ -1.73
NUP50-212ENST00000461194 CBLN2Q8IUK8 224 aa4.26□□□□□ -1.73
NUP50-212ENST00000461194 SLC7A5P1Q8MH63 180 aa4.26□□□□□ -1.73
NUP50-212ENST00000461194 PKHD1L1Q86WI1 4243 aa4.26□□□□□ -1.73
NUP50-212ENST00000461194 FAM168BA1KXE4 195 aa4.25□□□□□ -1.73
NUP50-212ENST00000461194 F8VRH5 84 aa4.25□□□□□ -1.73
NUP50-212ENST00000461194 ATP5LO75964 103 aa4.25□□□□□ -1.73
NUP50-212ENST00000461194 IGLC3P0DOY3 106 aa4.25□□□□□ -1.73
NUP50-212ENST00000461194 PMCHL1Q16048 86 aa4.25□□□□□ -1.73
NUP50-212ENST00000461194 SPINK6Q6UWN8 80 aa4.25□□□□□ -1.73
NUP50-212ENST00000461194 PHF5AQ7RTV0 110 aaKnown RBP4.25□□□□□ -1.73
NUP50-212ENST00000461194 CHCHD1Q96BP2 118 aaKnown RBP4.25□□□□□ -1.73
NUP50-212ENST00000461194 H3BRM9 83 aa4.24□□□□□ -1.73
NUP50-212ENST00000461194 SPINK8P0C7L1 97 aa4.24□□□□□ -1.73
NUP50-212ENST00000461194 NDUFA6P56556 154 aa4.24□□□□□ -1.73
NUP50-212ENST00000461194 SRSF9Q13242 221 aaKnown RBP eCLIP4.24□□□□□ -1.73
NUP50-212ENST00000461194 C9orf129Q5T035 196 aaKnown RBP4.24□□□□□ -1.73
NUP50-212ENST00000461194 KRTAP7-1Q8IUC3 87 aa4.24□□□□□ -1.73
NUP50-212ENST00000461194 COX7B2Q8TF08 81 aa4.24□□□□□ -1.73
NUP50-212ENST00000461194 PSORS1C2Q9UIG4 136 aa4.24□□□□□ -1.73
NUP50-212ENST00000461194 TRGC2P03986 189 aa4.23□□□□□ -1.73
NUP50-212ENST00000461194 MT1HL1P0DM35 61 aa4.23□□□□□ -1.73
NUP50-212ENST00000461194 ZNF22P17026 224 aaPredicted RBP4.23□□□□□ -1.73
NUP50-212ENST00000461194 FAM19A5Q7Z5A7 132 aaPredicted RBP4.23□□□□□ -1.73
NUP50-212ENST00000461194 BAGE3Q86Y29 109 aa4.23□□□□□ -1.73
NUP50-212ENST00000461194 C11orf86A6NJI1 115 aa4.22□□□□□ -1.73
NUP50-212ENST00000461194 M0QXV9 152 aa4.22□□□□□ -1.73
NUP50-212ENST00000461194 C1orf137Q5JT78 98 aa4.22□□□□□ -1.73
NUP50-212ENST00000461194 KRTAP11-1Q8IUC1 163 aa4.22□□□□□ -1.73
NUP50-212ENST00000461194 XAGE1AQ9HD64 81 aa4.22□□□□□ -1.73
NUP50-212ENST00000461194 A0A087X002 238 aa4.21□□□□□ -1.74
NUP50-212ENST00000461194 TRAV12-1A0A0B4J245 112 aa4.21□□□□□ -1.74
NUP50-212ENST00000461194 COLCA2A8K830 154 aa4.21□□□□□ -1.74
NUP50-212ENST00000461194 HSBP1O75506 76 aa4.21□□□□□ -1.74
NUP50-212ENST00000461194 ADAMTSL4-AS1Q5T5F5 129 aa4.21□□□□□ -1.74
NUP50-212ENST00000461194 REG3GQ6UW15 175 aa4.21□□□□□ -1.74
NUP50-212ENST00000461194 IFI27L1Q96BM0 104 aa4.21□□□□□ -1.74
NUP50-212ENST00000461194 LINC01600Q96MT4 127 aa4.21□□□□□ -1.74
NUP50-212ENST00000461194 CHTOPQ9Y3Y2 248 aaKnown RBP4.21□□□□□ -1.74
NUP50-212ENST00000461194 C22orf24Q9Y442 160 aa4.21□□□□□ -1.74
NUP50-212ENST00000461194 IGLV7-43P04211 117 aa4.2□□□□□ -1.74
NUP50-212ENST00000461194 UBE2BP63146 152 aa4.2□□□□□ -1.74
NUP50-212ENST00000461194 LBHQ53QV2 105 aaPredicted RBP4.2□□□□□ -1.74
NUP50-212ENST00000461194 TMEM170BQ5T4T1 132 aa4.2□□□□□ -1.74
NUP50-212ENST00000461194 FAM19A2Q8N3H0 131 aa4.2□□□□□ -1.74
NUP50-212ENST00000461194 TP73-AS1Q9UF72 201 aa4.2□□□□□ -1.74
NUP50-212ENST00000461194 HMCN2Q8NDA2 5059 aa4.2□□□□□ -1.74
NUP50-212ENST00000461194 SERF1AO75920 110 aa4.19□□□□□ -1.74
NUP50-212ENST00000461194 SFTA2Q6UW10 78 aa4.19□□□□□ -1.74
NUP50-212ENST00000461194 TMEM223A0PJW6 202 aa4.18□□□□□ -1.74
NUP50-212ENST00000461194 LEPROTL1O95214 131 aa4.18□□□□□ -1.74
NUP50-212ENST00000461194 PFN2P35080 140 aa4.18□□□□□ -1.74
NUP50-212ENST00000461194 KRTAP10-8P60410 259 aa4.18□□□□□ -1.74
NUP50-212ENST00000461194 COX17Q14061 63 aa4.18□□□□□ -1.74
NUP50-212ENST00000461194 MRPL55Q7Z7F7 128 aaKnown RBP4.18□□□□□ -1.74
NUP50-212ENST00000461194 DIRC1Q969H9 104 aa4.18□□□□□ -1.74
NUP50-212ENST00000461194 ZNF625Q96I27 306 aaPredicted RBP4.18□□□□□ -1.74
NUP50-212ENST00000461194 ERG28Q9UKR5 140 aa4.18□□□□□ -1.74
NUP50-212ENST00000461194 TNXBP22105 4242 aa4.18□□□□□ -1.74
NUP50-212ENST00000461194 NUPR1O60356 82 aa4.17□□□□□ -1.74
NUP50-212ENST00000461194 HSPB8Q9UJY1 196 aa4.17□□□□□ -1.74
NUP50-212ENST00000461194 H0Y9J4 135 aa4.16□□□□□ -1.74
NUP50-212ENST00000461194 ZNF861PO60384 105 aa4.16□□□□□ -1.74
NUP50-212ENST00000461194 SCO1O75880 301 aa4.16□□□□□ -1.74
NUP50-212ENST00000461194 LINC00167Q96N53 147 aa4.16□□□□□ -1.74
NUP50-212ENST00000461194 SND1-IT1Q9HBX3 110 aa4.16□□□□□ -1.74
NUP50-212ENST00000461194 H0Y8G0 127 aa4.15□□□□□ -1.75
NUP50-212ENST00000461194 BCE1O60756 84 aa4.15□□□□□ -1.75
NUP50-212ENST00000461194 FABP4P15090 132 aa4.15□□□□□ -1.75
NUP50-212ENST00000461194 NKAPP1Q8N9T2 125 aa4.15□□□□□ -1.75
NUP50-212ENST00000461194 RPL37AP8A6NKH3 93 aa4.14□□□□□ -1.75
NUP50-212ENST00000461194 HIST1H2BKO60814 126 aa4.14□□□□□ -1.75
NUP50-212ENST00000461194 HIST1H2BJP06899 126 aa4.14□□□□□ -1.75
NUP50-212ENST00000461194 KRTAP1-4P0C5Y4 121 aa4.14□□□□□ -1.75
NUP50-212ENST00000461194 HIST1H2BOP23527 126 aa4.14□□□□□ -1.75
NUP50-212ENST00000461194 PLNP26678 52 aa4.14□□□□□ -1.75
NUP50-212ENST00000461194 HIST1H2BBP33778 126 aa4.14□□□□□ -1.75
NUP50-212ENST00000461194 LINC00158P58513 81 aa4.14□□□□□ -1.75
NUP50-212ENST00000461194 HIST1H2BDP58876 126 aa4.14□□□□□ -1.75
NUP50-212ENST00000461194 HIST1H2BCP62807 126 aa4.14□□□□□ -1.75
NUP50-212ENST00000461194 HERV-K104P63124 156 aa4.14□□□□□ -1.75
NUP50-212ENST00000461194 HIST2H2BEQ16778 126 aa4.14□□□□□ -1.75
NUP50-212ENST00000461194 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.14□□□□□ -1.75
NUP50-212ENST00000461194 HIST1H2BHQ93079 126 aa4.14□□□□□ -1.75
NUP50-212ENST00000461194 HIST1H2BNQ99877 126 aa4.14□□□□□ -1.75
NUP50-212ENST00000461194 HIST1H2BMQ99879 126 aa4.14□□□□□ -1.75
NUP50-212ENST00000461194 LINC00587B1AMM8 73 aa4.13□□□□□ -1.75
NUP50-212ENST00000461194 DPM2O94777 84 aa4.13□□□□□ -1.75
NUP50-212ENST00000461194 RPL28P46779 137 aaKnown RBP4.13□□□□□ -1.75
NUP50-212ENST00000461194 Q8NDZ9 215 aa4.13□□□□□ -1.75
NUP50-212ENST00000461194 MAP1LC3CQ9BXW4 147 aa4.13□□□□□ -1.75
NUP50-212ENST00000461194 NDUFA12Q9UI09 145 aa4.13□□□□□ -1.75
NUP50-212ENST00000461194 IGLV1-50A0A075B6I6 118 aa4.12□□□□□ -1.75
NUP50-212ENST00000461194 IGLV7-46A0A075B6I9 117 aa4.12□□□□□ -1.75
NUP50-212ENST00000461194 IGKV2-28A0A075B6P5 120 aa4.12□□□□□ -1.75
NUP50-212ENST00000461194 A0A0U1RRA0 63 aa4.12□□□□□ -1.75
NUP50-212ENST00000461194 MYMXA0A1B0GTQ4 84 aa4.12□□□□□ -1.75
NUP50-212ENST00000461194 LEPROTO15243 131 aa4.12□□□□□ -1.75
NUP50-212ENST00000461194 ATP6V1G1O75348 118 aa4.12□□□□□ -1.75
NUP50-212ENST00000461194 IGKV2D-28P01615 120 aa4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms