RNA–Protein interactions for RNA: ENST00000461159.6

HDAC9-219, Transcript of histone deacetylase 9, humanhuman

TSL 2

Gene HDAC9, Length 2,557 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-219ENST00000461159 MIFP14174 115 aa5.98□□□□□ -1.45
HDAC9-219ENST00000461159 Q9H8V8 135 aa5.98□□□□□ -1.45
HDAC9-219ENST00000461159 TRAV23DV6A0A075B6W5 121 aa5.98□□□□□ -1.45
HDAC9-219ENST00000461159 RMI2Q96E14 147 aa5.98□□□□□ -1.45
HDAC9-219ENST00000461159 CHCHD7Q9BUK0 85 aa5.98□□□□□ -1.45
HDAC9-219ENST00000461159 LINC00846Q9NV44 126 aa5.98□□□□□ -1.45
HDAC9-219ENST00000461159 A8MUN3 132 aa5.97□□□□□ -1.45
HDAC9-219ENST00000461159 COX7A2LO14548 114 aa5.97□□□□□ -1.45
HDAC9-219ENST00000461159 PIK3CD-AS1Q5SR53 167 aa5.97□□□□□ -1.45
HDAC9-219ENST00000461159 MDFIQ99750 246 aa5.97□□□□□ -1.45
HDAC9-219ENST00000461159 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.97□□□□□ -1.45
HDAC9-219ENST00000461159 IGKV2-29A2NJV5 120 aaPredicted RBP5.97□□□□□ -1.45
HDAC9-219ENST00000461159 C22orf24Q9Y442 160 aa5.97□□□□□ -1.45
HDAC9-219ENST00000461159 TENM3Q9P273 2699 aa5.96□□□□□ -1.45
HDAC9-219ENST00000461159 IGLV5-45A0A087WSX0 123 aa5.96□□□□□ -1.46
HDAC9-219ENST00000461159 LINC00308Q8TCZ7 52 aa5.96□□□□□ -1.46
HDAC9-219ENST00000461159 LINC00467Q9BRT7 94 aa5.96□□□□□ -1.46
HDAC9-219ENST00000461159 CDKN2A-AS1Q9UH64 79 aa5.96□□□□□ -1.46
HDAC9-219ENST00000461159 C19orf73Q9NVV2 129 aa5.95□□□□□ -1.46
HDAC9-219ENST00000461159 A0A087WZ39 114 aa5.95□□□□□ -1.46
HDAC9-219ENST00000461159 SNURFQ9Y675 71 aa5.95□□□□□ -1.46
HDAC9-219ENST00000461159 C7orf65Q6ZTY9 151 aa5.94□□□□□ -1.46
HDAC9-219ENST00000461159 DIRC1Q969H9 104 aa5.94□□□□□ -1.46
HDAC9-219ENST00000461159 IGHV3-53P01767 116 aa5.94□□□□□ -1.46
HDAC9-219ENST00000461159 PRB2P02812 416 aaPredicted RBP5.94□□□□□ -1.46
HDAC9-219ENST00000461159 FUSP35637 526 aaKnown RBP eCLIP5.94□□□□□ -1.46
HDAC9-219ENST00000461159 CMC4P56277 68 aaPredicted RBP5.94□□□□□ -1.46
HDAC9-219ENST00000461159 C9orf66Q5T8R8 295 aa5.94□□□□□ -1.46
HDAC9-219ENST00000461159 ATP11AUNQ6ZP68 121 aa5.94□□□□□ -1.46
HDAC9-219ENST00000461159 OBSCN-AS1Q96MR7 158 aa5.94□□□□□ -1.46
HDAC9-219ENST00000461159 Q6ZSN1 163 aa5.93□□□□□ -1.46
HDAC9-219ENST00000461159 IGHV3-38A0A0C4DH36 116 aa5.93□□□□□ -1.46
HDAC9-219ENST00000461159 IGLV5-39A0A0G2JS06 123 aa5.93□□□□□ -1.46
HDAC9-219ENST00000461159 ERC2-IT1O76042 136 aa5.92□□□□□ -1.46
HDAC9-219ENST00000461159 FAM19A3Q7Z5A8 133 aa5.92□□□□□ -1.46
HDAC9-219ENST00000461159 OVOL2Q9BRP0 275 aa5.92□□□□□ -1.46
HDAC9-219ENST00000461159 GIG44P09565 113 aaPredicted RBP5.92□□□□□ -1.46
HDAC9-219ENST00000461159 WFDC9Q8NEX5 89 aa5.92□□□□□ -1.46
HDAC9-219ENST00000461159 ZNF625Q96I27 306 aaPredicted RBP5.92□□□□□ -1.46
HDAC9-219ENST00000461159 A6NN06 94 aa5.91□□□□□ -1.46
HDAC9-219ENST00000461159 Q6ZRP5 223 aa5.91□□□□□ -1.46
HDAC9-219ENST00000461159 KRTAP10-11P60412 298 aa5.91□□□□□ -1.46
HDAC9-219ENST00000461159 COX6A2Q02221 97 aa5.91□□□□□ -1.46
HDAC9-219ENST00000461159 LINC00242Q5T6M2 205 aa5.91□□□□□ -1.46
HDAC9-219ENST00000461159 SYCNQ0VAF6 134 aa5.9□□□□□ -1.46
HDAC9-219ENST00000461159 NKAPP1Q8N9T2 125 aa5.9□□□□□ -1.46
HDAC9-219ENST00000461159 DNAH3Q8TD57 4116 aa5.9□□□□□ -1.46
HDAC9-219ENST00000461159 TRBV7-4A0A0J9YYF1 115 aa5.9□□□□□ -1.47
HDAC9-219ENST00000461159 SMIM1B2RUZ4 78 aa5.9□□□□□ -1.47
HDAC9-219ENST00000461159 INSP01308 110 aa5.89□□□□□ -1.47
HDAC9-219ENST00000461159 UBE2AP49459 152 aa5.89□□□□□ -1.47
HDAC9-219ENST00000461159 Q6ZTC4 211 aa5.89□□□□□ -1.47
HDAC9-219ENST00000461159 hDV103S1A0JD37 113 aa5.89□□□□□ -1.47
HDAC9-219ENST00000461159 C11orf72Q8NBR9 251 aa5.89□□□□□ -1.47
HDAC9-219ENST00000461159 DEFB4AO15263 64 aa5.88□□□□□ -1.47
HDAC9-219ENST00000461159 LINC00269Q8N2A0 174 aa5.88□□□□□ -1.47
HDAC9-219ENST00000461159 CRPP02741 224 aa5.88□□□□□ -1.47
HDAC9-219ENST00000461159 RPL36AP83881 106 aaKnown RBP5.88□□□□□ -1.47
HDAC9-219ENST00000461159 DEFB135Q30KP9 77 aa5.88□□□□□ -1.47
HDAC9-219ENST00000461159 ENHOQ6UWT2 76 aa5.88□□□□□ -1.47
HDAC9-219ENST00000461159 RPL36ALQ969Q0 106 aaKnown RBP5.88□□□□□ -1.47
HDAC9-219ENST00000461159 COL7A1Q02388 2944 aa5.87□□□□□ -1.47
HDAC9-219ENST00000461159 TRAV22A0A0B4J277 110 aa5.87□□□□□ -1.47
HDAC9-219ENST00000461159 IGHV4-30-4P0DP06 118 aa5.87□□□□□ -1.47
HDAC9-219ENST00000461159 STAB2Q8WWQ8 2551 aa5.87□□□□□ -1.47
HDAC9-219ENST00000461159 CXCL6P80162 114 aa5.87□□□□□ -1.47
HDAC9-219ENST00000461159 C14orf132Q9NPU4 83 aa5.87□□□□□ -1.47
HDAC9-219ENST00000461159 TRBV10-1A0A0K0K1A3 114 aa5.86□□□□□ -1.47
HDAC9-219ENST00000461159 CSNK1G2-AS1Q8NCQ2 148 aa5.86□□□□□ -1.47
HDAC9-219ENST00000461159 FAM218AQ96MZ4 157 aa5.86□□□□□ -1.47
HDAC9-219ENST00000461159 K7EQD1 137 aa5.85□□□□□ -1.47
HDAC9-219ENST00000461159 TMEM254Q8TBM7 123 aa5.85□□□□□ -1.47
HDAC9-219ENST00000461159 NOP10Q9NPE3 64 aaKnown RBP5.85□□□□□ -1.47
HDAC9-219ENST00000461159 CDC42SE2Q9NRR3 84 aa5.85□□□□□ -1.47
HDAC9-219ENST00000461159 TRGV1A0A0A0MS02 117 aa5.85□□□□□ -1.47
HDAC9-219ENST00000461159 Q6ZTI0 123 aa5.85□□□□□ -1.47
HDAC9-219ENST00000461159 Q9HAA7 133 aa5.85□□□□□ -1.47
HDAC9-219ENST00000461159 C16orf90A8MZG2 172 aa5.84□□□□□ -1.47
HDAC9-219ENST00000461159 H0YGX0 51 aa5.84□□□□□ -1.47
HDAC9-219ENST00000461159 PSPHP1O15172 72 aa5.84□□□□□ -1.47
HDAC9-219ENST00000461159 LINC00313P59037 77 aa5.84□□□□□ -1.47
HDAC9-219ENST00000461159 SND1-IT1Q9HBX3 110 aa5.84□□□□□ -1.47
HDAC9-219ENST00000461159 PRKDCP78527 4128 aaKnown RBP5.83□□□□□ -1.48
HDAC9-219ENST00000461159 J3QL48 77 aa5.83□□□□□ -1.48
HDAC9-219ENST00000461159 NTM-AS1Q6ZSK4 140 aa5.83□□□□□ -1.48
HDAC9-219ENST00000461159 MIR7-3HGQ8N6C7 128 aa5.83□□□□□ -1.48
HDAC9-219ENST00000461159 COX7B2Q8TF08 81 aa5.83□□□□□ -1.48
HDAC9-219ENST00000461159 UBL5Q9BZL1 73 aa5.83□□□□□ -1.48
HDAC9-219ENST00000461159 HUWE1Q7Z6Z7 4374 aaKnown RBP5.83□□□□□ -1.48
HDAC9-219ENST00000461159 PRYO14603 147 aa5.83□□□□□ -1.48
HDAC9-219ENST00000461159 LINC01554Q52M75 96 aa5.83□□□□□ -1.48
HDAC9-219ENST00000461159 DEFB130BP0DP73 79 aa5.82□□□□□ -1.48
HDAC9-219ENST00000461159 DEFB130AP0DP74 79 aa5.82□□□□□ -1.48
HDAC9-219ENST00000461159 MP68P56378 58 aa5.82□□□□□ -1.48
HDAC9-219ENST00000461159 LINC00337Q8N6G1 96 aa5.82□□□□□ -1.48
HDAC9-219ENST00000461159 LINC00158P58513 81 aa5.82□□□□□ -1.48
HDAC9-219ENST00000461159 SMIM11BQ8TCY0 68 aa5.82□□□□□ -1.48
HDAC9-219ENST00000461159 MEGF8Q7Z7M0 2845 aa5.82□□□□□ -1.48
HDAC9-219ENST00000461159 LOC100131303A0A0U1RQF7 123 aa5.81□□□□□ -1.48
HDAC9-219ENST00000461159 TOMM7Q9P0U1 55 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms