RNA–Protein interactions for RNA: ENST00000460235.1

HDAC4-206, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 343 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-206ENST00000460235 LINC00308Q8TCZ7 52 aa7.85□□□□□ -1.15
HDAC4-206ENST00000460235 LITAFQ99732 161 aa7.85□□□□□ -1.15
HDAC4-206ENST00000460235 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.85□□□□□ -1.15
HDAC4-206ENST00000460235 DNAH17Q9UFH2 4485 aa7.85□□□□□ -1.15
HDAC4-206ENST00000460235 IGLV5-37A0A075B6J1 123 aa7.84□□□□□ -1.15
HDAC4-206ENST00000460235 ADAMTSL4-AS1Q5T5F5 129 aa7.84□□□□□ -1.15
HDAC4-206ENST00000460235 DAND5Q8N907 189 aa7.84□□□□□ -1.15
HDAC4-206ENST00000460235 DNAH2Q9P225 4427 aa7.84□□□□□ -1.15
HDAC4-206ENST00000460235 TRBV10-2A0A0K0K1G8 114 aa7.83□□□□□ -1.16
HDAC4-206ENST00000460235 TMEM238LA0A1B0GVL6 79 aa7.83□□□□□ -1.16
HDAC4-206ENST00000460235 A6NJY4 79 aa7.83□□□□□ -1.16
HDAC4-206ENST00000460235 HNRNPA3P51991 378 aaKnown RBP7.83□□□□□ -1.16
HDAC4-206ENST00000460235 FAM19A5Q7Z5A7 132 aaPredicted RBP7.83□□□□□ -1.16
HDAC4-206ENST00000460235 M0QXV9 152 aa7.82□□□□□ -1.16
HDAC4-206ENST00000460235 M0R378 163 aa7.82□□□□□ -1.16
HDAC4-206ENST00000460235 SCXQ7RTU7 201 aa7.82□□□□□ -1.16
HDAC4-206ENST00000460235 MRPL55Q7Z7F7 128 aaKnown RBP7.82□□□□□ -1.16
HDAC4-206ENST00000460235 CIRBP-AS1Q8TBR5 109 aa7.82□□□□□ -1.16
HDAC4-206ENST00000460235 FAM30AQ9NZY2 134 aa7.82□□□□□ -1.16
HDAC4-206ENST00000460235 DNAH10Q8IVF4 4471 aa7.81□□□□□ -1.16
HDAC4-206ENST00000460235 EPM2AB3EWF7 344 aa7.81□□□□□ -1.16
HDAC4-206ENST00000460235 UBE2BP63146 152 aa7.81□□□□□ -1.16
HDAC4-206ENST00000460235 MUSTN1Q8IVN3 82 aa7.81□□□□□ -1.16
HDAC4-206ENST00000460235 C22orf24Q9Y442 160 aa7.81□□□□□ -1.16
HDAC4-206ENST00000460235 FRAS1Q86XX4 4008 aa7.8□□□□□ -1.16
HDAC4-206ENST00000460235 A0A1W2PNN7 141 aa7.8□□□□□ -1.16
HDAC4-206ENST00000460235 VPREB1P12018 145 aa7.8□□□□□ -1.16
HDAC4-206ENST00000460235 NPC2P61916 151 aa7.8□□□□□ -1.16
HDAC4-206ENST00000460235 HSD52Q0P140 79 aa7.8□□□□□ -1.16
HDAC4-206ENST00000460235 S100A7L2Q5SY68 101 aa7.8□□□□□ -1.16
HDAC4-206ENST00000460235 TRAV13-2A0A0B4J235 113 aa7.79□□□□□ -1.16
HDAC4-206ENST00000460235 PANO1I0J062 215 aa7.79□□□□□ -1.16
HDAC4-206ENST00000460235 PRO1933Q9H354 126 aa7.79□□□□□ -1.16
HDAC4-206ENST00000460235 FAM168BA1KXE4 195 aa7.78□□□□□ -1.16
HDAC4-206ENST00000460235 SERTAD4-AS1Q5TG53 156 aa7.78□□□□□ -1.16
HDAC4-206ENST00000460235 C2orf91Q6ZV80 131 aa7.78□□□□□ -1.16
HDAC4-206ENST00000460235 TMEM126AQ9H061 195 aa7.78□□□□□ -1.16
HDAC4-206ENST00000460235 FAT2Q9NYQ8 4349 aa7.77□□□□□ -1.17
HDAC4-206ENST00000460235 FAM229AH3BQW9 127 aa7.77□□□□□ -1.17
HDAC4-206ENST00000460235 M0R143 59 aa7.77□□□□□ -1.17
HDAC4-206ENST00000460235 CEND1Q8N111 149 aa7.77□□□□□ -1.17
HDAC4-206ENST00000460235 HINT1P49773 126 aaPredicted RBP7.76□□□□□ -1.17
HDAC4-206ENST00000460235 XGP55808 180 aa7.76□□□□□ -1.17
HDAC4-206ENST00000460235 SOSTDC1Q6X4U4 206 aa7.76□□□□□ -1.17
HDAC4-206ENST00000460235 OR13C6PQ8NH95 151 aa7.76□□□□□ -1.17
HDAC4-206ENST00000460235 LINC00167Q96N53 147 aa7.76□□□□□ -1.17
HDAC4-206ENST00000460235 A4D1N5 150 aa7.75□□□□□ -1.17
HDAC4-206ENST00000460235 NCR3O14931 201 aa7.75□□□□□ -1.17
HDAC4-206ENST00000460235 PLA2G1BP04054 148 aaKnown RBP7.75□□□□□ -1.17
HDAC4-206ENST00000460235 DDTP30046 118 aa7.75□□□□□ -1.17
HDAC4-206ENST00000460235 A6NDN8 102 aa7.74□□□□□ -1.17
HDAC4-206ENST00000460235 PHF5AQ7RTV0 110 aaKnown RBP7.74□□□□□ -1.17
HDAC4-206ENST00000460235 RAB37Q96AX2 223 aa7.74□□□□□ -1.17
HDAC4-206ENST00000460235 RYR3Q15413 4870 aa7.74□□□□□ -1.17
HDAC4-206ENST00000460235 IGLV1-50A0A075B6I6 118 aa7.73□□□□□ -1.17
HDAC4-206ENST00000460235 GAGE10A6NGK3 116 aa7.73□□□□□ -1.17
HDAC4-206ENST00000460235 PRYO14603 147 aa7.73□□□□□ -1.17
HDAC4-206ENST00000460235 PRR3P79522 188 aaKnown RBP7.72□□□□□ -1.17
HDAC4-206ENST00000460235 LINC00528Q8N1L1 170 aa7.72□□□□□ -1.17
HDAC4-206ENST00000460235 PKD1P98161 4303 aa7.71□□□□□ -1.17
HDAC4-206ENST00000460235 A0A0B4J2C4 111 aa7.71□□□□□ -1.18
HDAC4-206ENST00000460235 TRBV10-3A0A0K0K1G6 114 aa7.71□□□□□ -1.18
HDAC4-206ENST00000460235 RPL37AP8A6NKH3 93 aa7.71□□□□□ -1.18
HDAC4-206ENST00000460235 IGLV6-57P01721 117 aa7.71□□□□□ -1.18
HDAC4-206ENST00000460235 RPL37AP61513 92 aaKnown RBP7.71□□□□□ -1.18
HDAC4-206ENST00000460235 REG3GQ6UW15 175 aa7.71□□□□□ -1.18
HDAC4-206ENST00000460235 KRTAP7-1Q8IUC3 87 aa7.71□□□□□ -1.18
HDAC4-206ENST00000460235 KCNQ1DNQ9H478 68 aa7.71□□□□□ -1.18
HDAC4-206ENST00000460235 IGKV2-28A0A075B6P5 120 aa7.7□□□□□ -1.18
HDAC4-206ENST00000460235 EIF4EBP3O60516 100 aaPredicted RBP7.7□□□□□ -1.18
HDAC4-206ENST00000460235 IGKV2D-28P01615 120 aa7.7□□□□□ -1.18
HDAC4-206ENST00000460235 CTAG1AP78358 180 aa7.7□□□□□ -1.18
HDAC4-206ENST00000460235 VAMP3Q15836 100 aa7.7□□□□□ -1.18
HDAC4-206ENST00000460235 TRAV23DV6A0A075B6W5 121 aa7.69□□□□□ -1.18
HDAC4-206ENST00000460235 HAMPP81172 84 aa7.69□□□□□ -1.18
HDAC4-206ENST00000460235 PRO1854Q9UHT4 67 aa7.69□□□□□ -1.18
HDAC4-206ENST00000460235 ETDCA0A1B0GVM5 59 aa7.68□□□□□ -1.18
HDAC4-206ENST00000460235 BCE1O60756 84 aa7.68□□□□□ -1.18
HDAC4-206ENST00000460235 SNCGO76070 127 aa7.68□□□□□ -1.18
HDAC4-206ENST00000460235 SMR3BP02814 79 aaPredicted RBP7.68□□□□□ -1.18
HDAC4-206ENST00000460235 RPL28P46779 137 aaKnown RBP7.68□□□□□ -1.18
HDAC4-206ENST00000460235 C1orf137Q5JT78 98 aa7.68□□□□□ -1.18
HDAC4-206ENST00000460235 LINC00337Q8N6G1 96 aa7.68□□□□□ -1.18
HDAC4-206ENST00000460235 Q8NDZ9 215 aa7.68□□□□□ -1.18
HDAC4-206ENST00000460235 PSORS1C2Q9UIG4 136 aa7.68□□□□□ -1.18
HDAC4-206ENST00000460235 HECTD4Q9Y4D8 3996 aa7.68□□□□□ -1.18
HDAC4-206ENST00000460235 ZNF73O43830 326 aaPredicted RBP7.67□□□□□ -1.18
HDAC4-206ENST00000460235 CFC1BP0CG36 223 aa7.67□□□□□ -1.18
HDAC4-206ENST00000460235 CFC1P0CG37 223 aa7.67□□□□□ -1.18
HDAC4-206ENST00000460235 UBE2AP49459 152 aa7.67□□□□□ -1.18
HDAC4-206ENST00000460235 FXYD2P54710 66 aa7.67□□□□□ -1.18
HDAC4-206ENST00000460235 BVES-AS1Q5T3Y7 98 aa7.67□□□□□ -1.18
HDAC4-206ENST00000460235 Q8N1X5 172 aa7.67□□□□□ -1.18
HDAC4-206ENST00000460235 DIRC1Q969H9 104 aa7.67□□□□□ -1.18
HDAC4-206ENST00000460235 NHP2Q9NX24 153 aaKnown RBP7.67□□□□□ -1.18
HDAC4-206ENST00000460235 TRBV7-6A0A0J9YX20 115 aa7.66□□□□□ -1.18
HDAC4-206ENST00000460235 RPL13AP40429 203 aaKnown RBP7.66□□□□□ -1.18
HDAC4-206ENST00000460235 Q1RN00 199 aa7.66□□□□□ -1.18
HDAC4-206ENST00000460235 DNAH11Q96DT5 4516 aa7.66□□□□□ -1.18
HDAC4-206ENST00000460235 H0Y9J4 135 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms