RNA–Protein interactions for RNA: ENST00000459902.1

CKAP2-204, Transcript of cytoskeleton associated protein 2, humanhuman

TSL 2

Gene CKAP2, Length 798 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-204ENST00000459902 SPINK7P58062 85 aa1.95□□□□□ -2.1
CKAP2-204ENST00000459902 WFDC9Q8NEX5 89 aa1.95□□□□□ -2.1
CKAP2-204ENST00000459902 SPRR4Q96PI1 79 aa1.95□□□□□ -2.1
CKAP2-204ENST00000459902 KRTAP4-1Q9BYQ7 146 aa1.95□□□□□ -2.1
CKAP2-204ENST00000459902 PLXNB2O15031 1838 aa1.95□□□□□ -2.1
CKAP2-204ENST00000459902 TRBV6-1A0A0K0K1D8 114 aa1.94□□□□□ -2.1
CKAP2-204ENST00000459902 LINC01546A6NGU7 62 aa1.94□□□□□ -2.1
CKAP2-204ENST00000459902 JMJD7-PLA2G4BH0Y9G9 81 aa1.94□□□□□ -2.1
CKAP2-204ENST00000459902 RNASE3P12724 160 aaKnown RBP1.94□□□□□ -2.1
CKAP2-204ENST00000459902 FXYD6P3P58550 94 aa1.94□□□□□ -2.1
CKAP2-204ENST00000459902 TPRXLQ17RH7 258 aa1.94□□□□□ -2.1
CKAP2-204ENST00000459902 C10orf113Q5VZT2 155 aa1.94□□□□□ -2.1
CKAP2-204ENST00000459902 SPATA8Q6RVD6 105 aa1.94□□□□□ -2.1
CKAP2-204ENST00000459902 WFDC10AQ9H1F0 79 aa1.94□□□□□ -2.1
CKAP2-204ENST00000459902 TMEM14CQ9P0S9 112 aa1.94□□□□□ -2.1
CKAP2-204ENST00000459902 ARFGEF3Q5TH69 2177 aa1.93□□□□□ -2.1
CKAP2-204ENST00000459902 DNAJC13O75165 2243 aa1.93□□□□□ -2.1
CKAP2-204ENST00000459902 TRBV6-4A0A1B0GX49 114 aa1.93□□□□□ -2.1
CKAP2-204ENST00000459902 I3L3M4 83 aa1.93□□□□□ -2.1
CKAP2-204ENST00000459902 M0R1W7 72 aa1.93□□□□□ -2.1
CKAP2-204ENST00000459902 COX6B1P14854 86 aa1.93□□□□□ -2.1
CKAP2-204ENST00000459902 LINC00322Q6ZN03 302 aaPredicted RBP1.93□□□□□ -2.1
CKAP2-204ENST00000459902 TIMM8BQ9Y5J9 83 aaPredicted RBP1.93□□□□□ -2.1
CKAP2-204ENST00000459902 A0A0G2JMZ2 1700 aa1.93□□□□□ -2.1
CKAP2-204ENST00000459902 LRRC37A2A6NM11 1700 aa1.93□□□□□ -2.1
CKAP2-204ENST00000459902 LRRC37AA6NMS7 1700 aa1.93□□□□□ -2.1
CKAP2-204ENST00000459902 IGIPA6NJ69 53 aa1.92□□□□□ -2.1
CKAP2-204ENST00000459902 DEFB132Q7Z7B7 95 aa1.92□□□□□ -2.1
CKAP2-204ENST00000459902 GAFA1Q96PS6 74 aa1.92□□□□□ -2.1
CKAP2-204ENST00000459902 KLK9Q9UKQ9 250 aa1.92□□□□□ -2.1
CKAP2-204ENST00000459902 INTS1Q8N201 2190 aaKnown RBP1.92□□□□□ -2.1
CKAP2-204ENST00000459902 C4BP0C0L5 1744 aa1.91□□□□□ -2.1
CKAP2-204ENST00000459902 A0A087WTM6 91 aa1.91□□□□□ -2.1
CKAP2-204ENST00000459902 IGKV2-40A0A087WW87 121 aaPredicted RBP1.91□□□□□ -2.1
CKAP2-204ENST00000459902 IGKV2D-40P01614 121 aaPredicted RBP1.91□□□□□ -2.1
CKAP2-204ENST00000459902 ARL14EPLP0DKL9 152 aa1.91□□□□□ -2.1
CKAP2-204ENST00000459902 FBN3Q75N90 2809 aa1.91□□□□□ -2.1
CKAP2-204ENST00000459902 RP1P56715 2156 aa1.91□□□□□ -2.1
CKAP2-204ENST00000459902 NBDYA0A0U1RRE5 68 aa1.9□□□□□ -2.11
CKAP2-204ENST00000459902 COX17Q14061 63 aa1.9□□□□□ -2.11
CKAP2-204ENST00000459902 FXYD3Q14802 87 aa1.9□□□□□ -2.11
CKAP2-204ENST00000459902 DEFB112Q30KQ8 113 aa1.9□□□□□ -2.11
CKAP2-204ENST00000459902 IL9P15248 144 aa1.89□□□□□ -2.11
CKAP2-204ENST00000459902 RPL37AP61513 92 aaKnown RBP1.89□□□□□ -2.11
CKAP2-204ENST00000459902 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.88□□□□□ -2.11
CKAP2-204ENST00000459902 IGKV2-29A2NJV5 120 aaPredicted RBP1.88□□□□□ -2.11
CKAP2-204ENST00000459902 NDUFA4O00483 81 aa1.88□□□□□ -2.11
CKAP2-204ENST00000459902 NDUFA3O95167 84 aa1.88□□□□□ -2.11
CKAP2-204ENST00000459902 C5orf56Q8N8D9 126 aa1.88□□□□□ -2.11
CKAP2-204ENST00000459902 Q96NJ1 140 aa1.88□□□□□ -2.11
CKAP2-204ENST00000459902 LINC00472Q9H8W2 130 aa1.88□□□□□ -2.11
CKAP2-204ENST00000459902 TRGV1A0A0A0MS02 117 aa1.87□□□□□ -2.11
CKAP2-204ENST00000459902 LINC00959A0A1B0GUT2 108 aa1.87□□□□□ -2.11
CKAP2-204ENST00000459902 PIN1P1O15428 100 aa1.87□□□□□ -2.11
CKAP2-204ENST00000459902 DEFB114Q30KQ6 69 aa1.87□□□□□ -2.11
CKAP2-204ENST00000459902 Q6ZRN7 208 aaPredicted RBP1.87□□□□□ -2.11
CKAP2-204ENST00000459902 Q6ZSA8 131 aa1.87□□□□□ -2.11
CKAP2-204ENST00000459902 COA5Q86WW8 74 aa1.87□□□□□ -2.11
CKAP2-204ENST00000459902 SPACA4Q8TDM5 124 aa1.87□□□□□ -2.11
CKAP2-204ENST00000459902 TMEM167BQ9NRX6 74 aa1.87□□□□□ -2.11
CKAP2-204ENST00000459902 CUL9Q8IWT3 2517 aa1.87□□□□□ -2.11
CKAP2-204ENST00000459902 UNC13CQ8NB66 2214 aa1.87□□□□□ -2.11
CKAP2-204ENST00000459902 HELZ2Q9BYK8 2649 aaKnown RBP1.86□□□□□ -2.11
CKAP2-204ENST00000459902 TRGV2A0A075B6R0 118 aa1.86□□□□□ -2.11
CKAP2-204ENST00000459902 H0YGX0 51 aa1.86□□□□□ -2.11
CKAP2-204ENST00000459902 HAMPP81172 84 aa1.86□□□□□ -2.11
CKAP2-204ENST00000459902 FXYD4P59646 89 aa1.85□□□□□ -2.11
CKAP2-204ENST00000459902 C10orf55Q5SWW7 151 aa1.85□□□□□ -2.11
CKAP2-204ENST00000459902 ABCA4P78363 2273 aa1.85□□□□□ -2.11
CKAP2-204ENST00000459902 SPAG17Q6Q759 2223 aa1.85□□□□□ -2.11
CKAP2-204ENST00000459902 LOC110117498A0A087WWA1 95 aa1.84□□□□□ -2.11
CKAP2-204ENST00000459902 A0A1B0GU69 56 aa1.84□□□□□ -2.11
CKAP2-204ENST00000459902 ETDCA0A1B0GVM5 59 aa1.84□□□□□ -2.11
CKAP2-204ENST00000459902 COX7BP24311 80 aa1.84□□□□□ -2.11
CKAP2-204ENST00000459902 KCNQ1DNQ9H478 68 aa1.84□□□□□ -2.11
CKAP2-204ENST00000459902 SDK1Q7Z5N4 2213 aa1.83□□□□□ -2.12
CKAP2-204ENST00000459902 ACYP2P14621 99 aa1.83□□□□□ -2.12
CKAP2-204ENST00000459902 FCGBPQ9Y6R7 5405 aaPredicted RBP1.83□□□□□ -2.12
CKAP2-204ENST00000459902 NCR3O14931 201 aa1.82□□□□□ -2.12
CKAP2-204ENST00000459902 INE1O15225 51 aa1.82□□□□□ -2.12
CKAP2-204ENST00000459902 DEFB119Q8N690 84 aa1.82□□□□□ -2.12
CKAP2-204ENST00000459902 ZFHX2Q9C0A1 2572 aaPredicted RBP1.81□□□□□ -2.12
CKAP2-204ENST00000459902 FREM1Q5H8C1 2179 aa1.81□□□□□ -2.12
CKAP2-204ENST00000459902 FN1P02751 2386 aaKnown RBP1.81□□□□□ -2.12
CKAP2-204ENST00000459902 RP1L1Q8IWN7 2480 aaPredicted RBP1.81□□□□□ -2.12
CKAP2-204ENST00000459902 KMT2BQ9UMN6 2715 aaPredicted RBP1.8□□□□□ -2.12
CKAP2-204ENST00000459902 TNCP24821 2201 aa1.8□□□□□ -2.12
CKAP2-204ENST00000459902 ALPK2Q86TB3 2170 aa1.79□□□□□ -2.12
CKAP2-204ENST00000459902 M0R2N4 97 aa1.79□□□□□ -2.12
CKAP2-204ENST00000459902 RPL38P63173 70 aaKnown RBP1.79□□□□□ -2.12
CKAP2-204ENST00000459902 TENM1Q9UKZ4 2725 aa1.78□□□□□ -2.12
CKAP2-204ENST00000459902 TNRC6CQ9HCJ0 1690 aaKnown RBP1.78□□□□□ -2.12
CKAP2-204ENST00000459902 CPSF4LA6NMK7 179 aaKnown RBP1.78□□□□□ -2.12
CKAP2-204ENST00000459902 Q6ZQY7 126 aa1.78□□□□□ -2.12
CKAP2-204ENST00000459902 MRPL33O75394 65 aaKnown RBP1.77□□□□□ -2.13
CKAP2-204ENST00000459902 TFF3Q07654 80 aa1.77□□□□□ -2.13
CKAP2-204ENST00000459902 SSBP3-AS1Q7Z2R9 100 aa1.77□□□□□ -2.13
CKAP2-204ENST00000459902 CCL19Q99731 98 aa1.77□□□□□ -2.13
CKAP2-204ENST00000459902 BRWD1Q9NSI6 2320 aa1.77□□□□□ -2.13
CKAP2-204ENST00000459902 GOLGA4Q13439 2230 aaKnown RBP1.76□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms