RNA–Protein interactions for RNA: ENST00000459639.5

U2AF1-204, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best) BASIC

Gene U2AF1, Length 1,675 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-204ENST00000459639 Q1RN00 199 aa15.9■□□□□ 0.14
U2AF1-204ENST00000459639 CNBPP62633 177 aaKnown RBP15.89■□□□□ 0.13
U2AF1-204ENST00000459639 LINC00337Q8N6G1 96 aa15.89■□□□□ 0.13
U2AF1-204ENST00000459639 Q6ZRP5 223 aa15.88■□□□□ 0.13
U2AF1-204ENST00000459639 XAGE1AQ9HD64 81 aa15.87■□□□□ 0.13
U2AF1-204ENST00000459639 LYRM7Q5U5X0 104 aa15.86■□□□□ 0.13
U2AF1-204ENST00000459639 PSMB2P49721 201 aa15.84■□□□□ 0.13
U2AF1-204ENST00000459639 GAGE2EQ4V326 116 aa15.84■□□□□ 0.13
U2AF1-204ENST00000459639 Q8NDZ9 215 aa15.84■□□□□ 0.13
U2AF1-204ENST00000459639 GAGE2DQ9UEU5 116 aa15.84■□□□□ 0.13
U2AF1-204ENST00000459639 SPCS1Q9Y6A9 102 aa15.84■□□□□ 0.13
U2AF1-204ENST00000459639 RPL18AQ02543 176 aaKnown RBP15.83■□□□□ 0.13
U2AF1-204ENST00000459639 K7EP34 96 aa15.83■□□□□ 0.12
U2AF1-204ENST00000459639 C1orf134Q5TEV5 83 aa15.83■□□□□ 0.12
U2AF1-204ENST00000459639 ALMS1Q8TCU4 4167 aa15.82■□□□□ 0.12
U2AF1-204ENST00000459639 DNAH10Q8IVF4 4471 aa15.81■□□□□ 0.12
U2AF1-204ENST00000459639 LOC107984640A0A0U1RRK4 108 aa15.81■□□□□ 0.12
U2AF1-204ENST00000459639 GAGE10A6NGK3 116 aa15.81■□□□□ 0.12
U2AF1-204ENST00000459639 GTF2H5Q6ZYL4 71 aa15.81■□□□□ 0.12
U2AF1-204ENST00000459639 TRIAP1O43715 76 aa15.8■□□□□ 0.12
U2AF1-204ENST00000459639 PRR3P79522 188 aaKnown RBP15.8■□□□□ 0.12
U2AF1-204ENST00000459639 IGLV2-33A0A075B6J2 118 aaPredicted RBP15.79■□□□□ 0.12
U2AF1-204ENST00000459639 TRBV10-2A0A0K0K1G8 114 aa15.79■□□□□ 0.12
U2AF1-204ENST00000459639 NCR3O14931 201 aa15.79■□□□□ 0.12
U2AF1-204ENST00000459639 UBE2V1Q13404 147 aa15.79■□□□□ 0.12
U2AF1-204ENST00000459639 C9orf129Q5T035 196 aaKnown RBP15.79■□□□□ 0.12
U2AF1-204ENST00000459639 OR13C6PQ8NH95 151 aa15.79■□□□□ 0.12
U2AF1-204ENST00000459639 A0A087WTM6 91 aa15.78■□□□□ 0.12
U2AF1-204ENST00000459639 Q8N814 137 aa15.78■□□□□ 0.12
U2AF1-204ENST00000459639 DNAH6Q9C0G6 4158 aa15.77■□□□□ 0.12
U2AF1-204ENST00000459639 SCGB1C2P0DMR2 95 aa15.77■□□□□ 0.12
U2AF1-204ENST00000459639 VPREB1P12018 145 aa15.77■□□□□ 0.12
U2AF1-204ENST00000459639 COX6CP09669 75 aa15.76■□□□□ 0.11
U2AF1-204ENST00000459639 RPL28P46779 137 aaKnown RBP15.76■□□□□ 0.11
U2AF1-204ENST00000459639 TMEM126AQ9H061 195 aa15.76■□□□□ 0.11
U2AF1-204ENST00000459639 PLA2G2DQ9UNK4 145 aa15.74■□□□□ 0.11
U2AF1-204ENST00000459639 TRBV20-1A0A075B6N2 111 aa15.73■□□□□ 0.11
U2AF1-204ENST00000459639 GAGE2BQ13066 116 aa15.73■□□□□ 0.11
U2AF1-204ENST00000459639 SMIM11BQ8TCY0 68 aa15.73■□□□□ 0.11
U2AF1-204ENST00000459639 S100A7L2Q5SY68 101 aa15.73■□□□□ 0.11
U2AF1-204ENST00000459639 PKIGQ9Y2B9 76 aa15.73■□□□□ 0.11
U2AF1-204ENST00000459639 C9orf163Q8N9P6 203 aa15.72■□□□□ 0.11
U2AF1-204ENST00000459639 TCL1BO95988 128 aa15.7■□□□□ 0.1
U2AF1-204ENST00000459639 KMT2AQ03164 3969 aa15.7■□□□□ 0.1
U2AF1-204ENST00000459639 M0R378 163 aa15.7■□□□□ 0.1
U2AF1-204ENST00000459639 IGLV6-57P01721 117 aa15.7■□□□□ 0.1
U2AF1-204ENST00000459639 C16orf90A8MZG2 172 aa15.69■□□□□ 0.1
U2AF1-204ENST00000459639 IGLV5-37A0A075B6J1 123 aa15.67■□□□□ 0.1
U2AF1-204ENST00000459639 A0A096LNI7 61 aa15.67■□□□□ 0.1
U2AF1-204ENST00000459639 SERTAD4-AS1Q5TG53 156 aa15.67■□□□□ 0.1
U2AF1-204ENST00000459639 H3BMG7 143 aa15.66■□□□□ 0.1
U2AF1-204ENST00000459639 NKAPP1Q8N9T2 125 aa15.66■□□□□ 0.1
U2AF1-204ENST00000459639 ATXN8Q156A1 80 aa15.65■□□□□ 0.1
U2AF1-204ENST00000459639 TRBV10-3A0A0K0K1G6 114 aa15.64■□□□□ 0.09
U2AF1-204ENST00000459639 CLEC2BQ92478 149 aa15.63■□□□□ 0.09
U2AF1-204ENST00000459639 FAM168BA1KXE4 195 aa15.61■□□□□ 0.09
U2AF1-204ENST00000459639 IGKV2-24A0A0C4DH68 120 aa15.6■□□□□ 0.09
U2AF1-204ENST00000459639 H0YGX0 51 aa15.6■□□□□ 0.09
U2AF1-204ENST00000459639 LST1O00453 97 aa15.6■□□□□ 0.09
U2AF1-204ENST00000459639 RTL8CO15255 209 aa15.6■□□□□ 0.09
U2AF1-204ENST00000459639 SDIM1Q6ZPB5 146 aa15.6■□□□□ 0.09
U2AF1-204ENST00000459639 CBY1Q9Y3M2 126 aa15.6■□□□□ 0.09
U2AF1-204ENST00000459639 LCE6AA0A183 80 aa15.6■□□□□ 0.09
U2AF1-204ENST00000459639 TNP2Q05952 138 aa15.6■□□□□ 0.09
U2AF1-204ENST00000459639 KRTAP7-1Q8IUC3 87 aa15.6■□□□□ 0.09
U2AF1-204ENST00000459639 DNAH2Q9P225 4427 aa15.59■□□□□ 0.09
U2AF1-204ENST00000459639 TRAV23DV6A0A075B6W5 121 aa15.59■□□□□ 0.09
U2AF1-204ENST00000459639 C7orf33Q8WU49 177 aa15.58■□□□□ 0.08
U2AF1-204ENST00000459639 LINC01620Q4KN68 170 aa15.57■□□□□ 0.08
U2AF1-204ENST00000459639 FAM19A5Q7Z5A7 132 aaPredicted RBP15.57■□□□□ 0.08
U2AF1-204ENST00000459639 C6orf99Q4VX62 202 aa15.57■□□□□ 0.08
U2AF1-204ENST00000459639 LINC00474Q9P2X8 69 aa15.57■□□□□ 0.08
U2AF1-204ENST00000459639 C22orf24Q9Y442 160 aa15.55■□□□□ 0.08
U2AF1-204ENST00000459639 FAM218AQ96MZ4 157 aa15.54■□□□□ 0.08
U2AF1-204ENST00000459639 PRO0461Q9UI25 63 aa15.54■□□□□ 0.08
U2AF1-204ENST00000459639 F8W1H4 67 aa15.54■□□□□ 0.08
U2AF1-204ENST00000459639 CHTF8P0CG12 524 aa15.54■□□□□ 0.08
U2AF1-204ENST00000459639 MRPL55Q7Z7F7 128 aaKnown RBP15.54■□□□□ 0.08
U2AF1-204ENST00000459639 IGLV5-52A0A0A0MRZ9 124 aa15.53■□□□□ 0.08
U2AF1-204ENST00000459639 DIRC1Q969H9 104 aa15.53■□□□□ 0.08
U2AF1-204ENST00000459639 ZNF73O43830 326 aaPredicted RBP15.52■□□□□ 0.08
U2AF1-204ENST00000459639 TRACP01848 142 aa15.52■□□□□ 0.08
U2AF1-204ENST00000459639 DNAH17Q9UFH2 4485 aa15.52■□□□□ 0.07
U2AF1-204ENST00000459639 A0A1W2PNN7 141 aa15.51■□□□□ 0.07
U2AF1-204ENST00000459639 C9JAW5 83 aa15.51■□□□□ 0.07
U2AF1-204ENST00000459639 MTURNQ8N3F0 131 aa15.51■□□□□ 0.07
U2AF1-204ENST00000459639 LINC00167Q96N53 147 aa15.51■□□□□ 0.07
U2AF1-204ENST00000459639 KCNQ1DNQ9H478 68 aa15.51■□□□□ 0.07
U2AF1-204ENST00000459639 M0QXV9 152 aa15.5■□□□□ 0.07
U2AF1-204ENST00000459639 IGLV1-50A0A075B6I6 118 aa15.49■□□□□ 0.07
U2AF1-204ENST00000459639 TRBV7-6A0A0J9YX20 115 aa15.48■□□□□ 0.07
U2AF1-204ENST00000459639 FUSP35637 526 aaKnown RBP eCLIP15.48■□□□□ 0.07
U2AF1-204ENST00000459639 A0A087WYN8 130 aa15.48■□□□□ 0.07
U2AF1-204ENST00000459639 A0A1B0GX51 115 aa15.47■□□□□ 0.07
U2AF1-204ENST00000459639 PRYO14603 147 aa15.47■□□□□ 0.07
U2AF1-204ENST00000459639 SPACA4Q8TDM5 124 aa15.47■□□□□ 0.07
U2AF1-204ENST00000459639 RPL37AP8A6NKH3 93 aa15.45■□□□□ 0.06
U2AF1-204ENST00000459639 SLC25A20O43772 301 aa15.45■□□□□ 0.06
U2AF1-204ENST00000459639 SMCPP49901 116 aaPredicted RBP15.45■□□□□ 0.06
U2AF1-204ENST00000459639 PANO1I0J062 215 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms